Salmo salar (Atlantic salmon): 106568251
Help
Entry
106568251 CDS
T04363
Name
(RefSeq) uncharacterized LOC106568251
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106568251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106568251
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106568251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
106568251
NCBI-ProteinID:
XP_013993896
UniProt:
A0A1S3LSP6
LinkDB
All DBs
Position
ssa13:complement(86158076..86202281)
Genome browser
AA seq
1631 aa
AA seq
DB search
MSLSDQSRQWYPTSVQVTVVQARSLRIKGRNGTNDAYAIMQVAKDKFATSVAEKSVAPVW
KEEATFELPLFHNRNTEKCTLHVHVMHRALVGPDTLLGQAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVQVDIQFMKNNMTASMFDLSATDKPHSRLGKFKDKVRGKKEGLSDT
ASAVVPSFTQVLTDSEGEGEGVGKGGADKGEKKKKNKLKSLFSPKSNLQRHGLSQSMSVL
GPLPEKNSSLSGSRSTGLNVDSSEGKNKFKFLTHKRTGSSLSLGRSKIPAPLAERSNLCI
NGTHMYTEEPQPRSARTGSNFSLASSGHGSMEDLRKAQGRKSSGTSMDSFRALKQPSTWA
EEEERVMLDEERKRKEEQESKKLDEEERIRKEEQEKRRITEKEGEEIRLEAEQEERRLTV
EGEDRVWKEDQEKWRLEEKRREMEEQERWEEEERIRREEHERMREDILRKEDERKMREVE
ERLKREKDERIKEEERTRREQEEDMQRREEEERKMREEEERLRREQEDILRRIREEEEEE
RRAEERMTREAEERMKREDDRLRKEEEEKRRIEAEEGRMKREEDRVKEEEEERRRFAEEE
GRMKREDDRLRKEEEEEKRRLEAEERMKREEDRVRKEEEEEKRRVEAEEERMKREEDRVR
KEEEEEKRRIEAEEERMKREAEEERMKREAEEERMKREAEEERMKREAEEERMKREAEEE
RMKREAEEERMKREAEEERMKREAEEERMKREAEEERMKREEDRVRKEEEEKKRRIEAEE
ERIKREAEEERMKREEDRLREEEEEERRRIEEEDQIIKREEDRLRKEERRMREEEERVRK
SAEEDWLSEEMGIKRMEKDRRIKREEEDRLRKEEELRKIRENEERLRREEEDDMQRKEEE
QRKMRNEEERIRRIEQEMLRKEEAERTRLEEEREVERRRDEEQRELMEAKERFRVDEENM
KKEELRGQEEKMTEKEKKKNAQMEEKRRHEEVRVKLDKVEQQMKQNKEAEAIVCNNPFEE
VSPTTSCDDNSSNNPFEETPTTSSTGPISCRTNKVSAVKPRPSSWVNPSQPSMSSNPFLS
FLSPEMEISMDSPRVDGETRGAQDPSTDLMEKKDPALLPPNNQRWARMDNWPSKGNAHSV
TVNLAQTKPTKQPPPPRHQSSTSLVGCGDDQESVSGQDHSSIRMDKGPAPDRPSQAPSQT
QRDQSMTRVNLGHKDIGASMSKVSQRVVQMITPLRFSSTATTEHTSGGQSSTHHGNQPEQ
HMPSATGGLRVAKHNKGPAPSRPQYPPGKTMPKVDVLDKQLNAEEHDSLVEFDTNNPFAE
YCRMEKSSGYGEEQRLTGEHQESLDSHNHQTCTSTEANPGSMQNSVVGDSMELPTPDVLL
AEDGSRPIKNTLAKRVCVPLPPLKKTSTYREEDTGKQSSVKLQSPGASSLSNLSSSISEK
MQNRGVGVALTCVNIAQPPCVPSPAPPFLPQPKPLKGSGGRSNCPPQTSSLPGQRTLLQA
GAMSSVAEHCSGEEAGGRGDRPTSSTRRPHPVKPLSFLENQPASNIQAGQTGISTGILGV
LQEKLKVKDTGVKGQYSQLTQEELISLVVKQQDQLSKRDNKIKELEQYIDNLLVRIIEEQ
PSILMSMNSLK
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcagaccagagccgacagtggtatccgaccagtgtacaggtaactgtggtt
caggcaagaagcctgaggataaaggggagaaatggcaccaacgacgcatacgccatcatg
caagtggccaaggataaattcgctacatcggtggcagagaagagcgtggcaccggtgtgg
aaggaagaggccacgttcgagctgccgcttttccacaaccgtaacacagaaaagtgtacg
ttgcacgtccacgtaatgcaccgggctctcgtgggacctgacacgttgctcggccaagca
gtcatcaacctgttggagctcagcgaggttaaatcccgtaataagactgaatggcataaa
ctgctggacaaggcaggcaagccagacaaagaccggggagaggtgcaggtggacatccag
tttatgaagaataacatgacagccagcatgttcgacctctctgctacagacaagccacac
tcccgcctgggaaagttcaaggacaaggtgcgaggcaaaaaggagggtctgtcggacact
gcgtctgccgtggtaccgtccttcacccaggttctgacggacagcgagggggagggagag
ggggtagggaaggggggtgcagacaaaggagagaaaaagaagaaaaacaagctgaagtct
ctgttttctcccaagtctaacctgcagcgtcacggactgtctcagtccatgtctgtcctt
ggccctctgcctgagaagaactcctcactgagcggcagccgctccacaggcctcaatgtg
gactcctctgaaggaaaaaataaattcaagtttctgacccataagcgcacaggcagttcc
ctgtccctagggcgctctaagattcctgccccgcttgcagagcggagtaacctgtgcatc
aacggcactcacatgtacacagaggagccccagccccggagcgcccgcactggctccaac
tttagcctggccagctcaggccatggctccatggaagacctgcgcaaggcccagggtcgt
aagagctccggcacctccatggactccttcagggccctgaagcagccttcgacctgggca
gaggaggaagagagggttatgttggatgaggagaggaagagaaaggaagagcaggagagt
aagaagttagacgaggaagagaggataaggaaggaggaacaagagaaaaggaggattacg
gagaaggagggggaagaaataaggctagaagcggaacaggaggagaggagactgacggtg
gagggagaggacagggtttggaaggaagaccaggaaaagtggaggttagaggagaaaagg
agagaaatggaggaacaagagcggtgggaagaagaggaaagaattaggagagaagaacat
gaaagaatgagggaggatatactgagaaaggaggacgagaggaaaatgagggaggtggag
gaaagattgaagagggagaaagatgagaggattaaggaggaagaaaggactaggagagaa
caggaggaggatatgcaaagaagagaggaagaggagaggaagatgagggaggaggaagaa
agactaaggagggaacaggaggatatactgagaagaataagggaggaggaagaagaggaa
aggagggctgaagaaagaatgacgagagaggctgaagaaagaatgaagagagaggatgat
aggctgaggaaggaggaggaagaaaagaggaggattgaggctgaagaaggaagaatgaag
agagaggaggacagagtgaaggaggaggaggaagaaaggaggaggtttgcggaggaagaa
ggaagaatgaagagagaggatgataggctgaggaaggaggaggaagaagaaaagaggagg
cttgaggcagaagaaagaatgaagagagaggaggaccgagtgaggaaggaggaggaagaa
gaaaagaggagggttgaggctgaagaagaaagaatgaagagagaggaggaccgagtgagg
aaggaggaggaagaagaaaagaggaggattgaggcagaagaagaaagaatgaagagagag
gctgaagaagaaagaatgaagagagaggctgaagaagaaagaatgaagagagaggctgaa
gaagaaagaatgaagagagaggctgaagaagaaagaatgaagagagaggctgaagaagaa
agaatgaagagagaggcagaagaagaaagaatgaagagagaggctgaagaagaaagaatg
aagagagaggcagaagaagaaagaatgaagagagaggctgaagaagaaagaatgaagaga
gaggaggaccgagtgaggaaggaggaggaagaaaaaaagaggaggattgaggcagaagaa
gaaagaattaagagagaggctgaagaagaaagaatgaagagagaggaggataggctgagg
gaggaggaggaagaagaaaggaggaggattgaggaggaagatcaaataattaagagagag
gaggataggctgagaaaggaggagagaaggatgagggaggaggaagaaagagtgaggaag
tccgcagaggaagattggctgagcgaggaaatggggataaagaggatggagaaggacaga
agaattaagagggaagaggaggataggctgagaaaggaggaagagctgaggaagattagg
gaaaatgaagaaaggctaaggagggaagaggaggatgatatgcagagaaaggaagaagag
cagaggaagatgaggaatgaggaggaaaggataaggagaatagagcaggagatgttgaga
aaggaagaagcagaaagaacgaggcttgaagaagaaagggaagtggagagaagaagagat
gaggagcagagagaactgatggaggcgaaagagaggtttagggtggatgaagaaaatatg
aaaaaagaggagttgagagggcaggaagagaagatgacagagaaggagaaaaagaagaat
gcacagatggaggaaaagcgaaggcatgaggaagtgagggtaaagttggacaaagttgaa
caacaaatgaagcagaataaagaggcagaggccattgtgtgcaataatccttttgaggaa
gtctctcctaccacttcatgtgatgacaactcttcaaataacccgtttgaggagaccccc
acaacctcttctactggtcccatcagctgccgaacaaataaagtatcagcagttaagcca
agaccctcttcatgggtgaacccttctcagcctagtatgtcttccaaccccttcttatcg
ttcttgtctcctgaaatggagatttctatggactcccctagagtcgatggggaaaccaga
ggtgcccaggacccgtctactgatctaatggagaagaaagaccctgcccttctgcccccc
aacaaccagcgctgggctcgtatggacaactggcctagcaagggcaacgctcattctgtc
acagtgaacctcgcccaaacaaagccaacaaaacagccaccacctccaaggcatcaatct
tccacgtcactggtgggatgcggggatgaccaggagagtgttagtggtcaggaccattcc
agtatcaggatggacaagggtcccgctccagacagaccaagccaggctccaagccagaca
cagagggaccagagtatgactagagtgaacctgggacataaggacataggtgcctccatg
tccaaggtctctcaacgtgtggtacagatgatcacaccactgagattttcctccactgct
acaacagaacacacaagtggaggccagagctctacccaccatgggaaccaaccagaacaa
cacatgccatctgccactggggggttgagggtggctaaacacaataaaggtccagcacct
tctaggccccagtaccctccagggaagacaatgccaaaagttgatgtattagataagcaa
ttgaatgctgaggaacatgactctttggttgagtttgatacaaataatccctttgcagaa
tactgcagaatggagaagtcctctggatatggtgaagaacagagactaactggtgaacat
caggagagcctagactctcacaatcatcagacttgtacctccacagaagcaaatccaggt
tcaatgcagaatagtgtggttggggactcaatggagcttccaacgccagatgttctgcta
gctgaggatggctcccgtcccatcaaaaacacattagcaaagcgggtctgtgttcccttg
cctccattgaagaaaacatccacatatagagaggaggatactggtaaacagagttctgta
aaactacaaagcccaggggcttcctctttgagtaatctttcctcaagtatctcagaaaaa
atgcagaatcgcggtgtgggtgtggcactaacttgtgttaacattgcccagcccccatgt
gtaccctcacctgccccccccttcttaccccaacccaaacccctgaagggatcagggggc
aggagtaactgtcctccccagacaagctctctccccggccagaggaccctgcttcaggct
ggagctatgtcctccgttgcagagcattgcagtggagaggaggcgggagggagaggggac
aggcctacctcaagcacacgcaggccccatccagtaaagcccttgagcttcctggaaaac
cagccagcctccaacatccaggcggggcagactggcatatctacaggaatcctcggtgtc
cttcaagagaagttaaaggtcaaagacacaggggtcaaaggtcagtactcccagctgacc
caggaggagctgatctccctggtggtgaagcagcaggaccagctctccaagagggacaac
aagatcaaggagctggagcagtacattgacaacctgctggtgcgcatcattgaggagcaa
cccagtatcctgatgtccatgaactcactcaaatga
DBGET
integrated database retrieval system