Salmo salar (Atlantic salmon): 106568285
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Entry
106568285 CDS
T04363
Name
(RefSeq) protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106568285
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106568285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
106568285
NCBI-ProteinID:
XP_013993948
UniProt:
A0A1S3LSI9
LinkDB
All DBs
Position
ssa13:91482179..91513377
Genome browser
AA seq
1418 aa
AA seq
DB search
MVEDFPRITVKVFKMMDPGQDLLLAALSESGICPNDLFDFDPQDAAMPSPTPQSISISAL
GVDSGMEPTGVTAPPNPTGTIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHT
ITVTKVVHTTPSALRGSTSTLTSSTALPSAVSTVVSSSTEQIQLKDLLRTGGLKGSSLVE
LMRLKPPQDIAQPVATAIATGTTELNNGIKEVSGKDAARIWVNDDVKVRSFSPTLKLPGM
KEEEEAEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPNVWYRMSIPE
ETIDRGWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLG
RKRSLWFSVSNDLKYDAERDLKDIGAKNIPVYSLNKFKYGKISSKHNGSVKKGVIFATYS
SLIGESQSGGKYKTRFKQLLHWCGQVFDGVPIQIVYDECHKAKNVCPIGSSKPTKTGLAV
LELQNKLPKARVVYASATGASEPRNMAYMSRLGIWGEGTPFREFSNFIQAVERRGVGAME
IVAMDMKLRGMYIARQLSFTGVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLM
DAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEART
LEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDRGKLFSLLGIDLPAMKTPFPSEAAAE
QKGKKRKGANIKKAEKRKRKSGGLSGNSSDDSKSEESHKDDAESDDSFKSVSSGEDDEDD
FNPFKDDSSEDEEDDPWLSGKRKGVKKCKEKKKKKKSIDPDSIHSALLASGLGSIRPAFT
TPTVKTSSTPAIAKVEVDDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDE
LGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISE
AASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELA
GEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDFPL
VNPPSNFEGDFYKEILHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNA
LFQYFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKMEAKKFLTPGYSTSGHVELYTV
SVERGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVKEVNSKKRLFLVYRPNTGKQL
KLEAYADIKKKCKKVLSDDAKQHWIDQYQSSAEICSHAYWRGNCKKVSMGLQCEVGLRCR
TYYVLCGSVLSVWTKVEGVLASVSGTNIKMQIVRLRTEDGQRIVGLIIPINCVSPLTNIL
SSSDQSQQLAVQQQQKWQQLHPQSLSHMHNMGSPPSLT
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggatttcccgaggatcacagtaaaagtgttcaaaatgatggatcctggacag
gatttgctcctagcagccctgagcgagagcggcatctgccctaacgacctgtttgacttt
gaccctcaggatgctgcaatgccctctcccaccccacagtccatctccatcagtgccctg
ggtgttgactcggggatggagccaacgggagtcacagctccacccaatcctacaggcaca
atcaggcacaagcctcaaccctcaaccaccacatttgtcttaaatcaactgaatcagttg
ccatcgctgggaacaatcgttgtgaccaagccctcaactggaggcacggccagacatacc
atcacagtcaccaaggtagtccataccactccctcagccctgcgggggtccacttccaca
ctcacctcctccacggctctcccctccgcagtctccacagtggtttcttccagcacagaa
cagatccagctgaaggacctgttgaggacaggtggtctgaagggtagtagtctggtggaa
ctcatgaggctcaagccgccgcaagacatcgcccagccggtcgccacagcaatagccaca
ggcaccacggaactgaacaacggtataaaggaggtgtcaggtaaagacgccgctcggatc
tgggtgaacgacgacgttaaagtgcggagcttctcacctacactaaaactcccaggaatg
aaagaggaggaggaggctgaggaagaggaggatgaagagttgggtcatgctgagacatac
gccgagtacatgcccatgaaattgcggatcgggctgcgtcaccctgacccggttgtggag
acaagctccctgtccagtgtgaatcctcccaacgtgtggtacagaatgtccataccggag
gagaccattgaccgcggctggctatctgctctgcagctggaggccatcacatacgctgcc
cagcaacatgaaacattcctccctaacggcgaccgagcgtcctatctgataggagacggg
gctggagtggggaagggccggaccatcgctgggataatctacgagaactacctcctgggc
agaaagagatcactctggttcagcgtttctaatgacctgaagtatgatgcagagagggat
ctgaaagacataggagccaagaacattccggtctattcccttaacaagtttaagtatggt
aagatctcgtccaaacacaacggcagtgtgaagaagggggtgatcttcgctacgtactcc
tctctgataggagagagccagtctggagggaagtacaagacccgcttcaaacagctgctc
cactggtgtggacaggtctttgacggagtccccattcagattgtgtatgacgagtgtcac
aaagccaaaaatgtctgtcccatcggctcgtccaaacccaccaagactggactggccgtc
ctggagctgcagaacaaactgcccaaggcgcgggtggtgtacgctagcgccactggtgcg
tctgagccccgtaacatggcctacatgagccggctgggcatctggggggaggggaccccc
ttcagagagtttagcaacttcattcaggctgtggagcgccgaggtgtgggtgctatggag
atagttgccatggatatgaagctgagggggatgtacatcgccaggcagctgagcttcacg
ggtgtcacgttcaagattgaggaggttcctctgacaacccactacatcaagatgtacaac
aagtctgtacgcctgtgggtggctgcgcgggaaaagttccaggcggctgctaacctgatg
gatgcagagcagcggatgaagaagtccatgtggggtcagttctggtcggcccaccagagg
ttcttcaagtacctctgcatcgcgtccaaggtccgcagggtggtgcagctcgccagggag
gaggtcaaaaacggaaagtgtgttgtgattggtctccagtcgacaggagaggccagaaca
ctggaggccctggaggaaggaggaggagagctcaacgactttgtctccaccgccaaaggt
gtgctccagtccctggtagagaagcacttcccagctccagacagaggaaagctgttcagc
ctgctgggcattgacctgccggccatgaaaacccccttccccagcgaggctgcagcagag
cagaagggaaagaagaggaaaggtgccaacataaagaaggcagagaagaggaagagaaag
tcaggtggtctgtcggggaacagctctgacgacagcaaatcagaagagtctcataaggac
gatgcagagagtgacgacagcttcaagtcggtcagctcgggagaagatgacgaagacgac
ttcaatcccttcaaggatgactccagcgaggatgaggaggatgacccctggctgtctgga
aagaggaaaggggtgaagaaatgcaaggagaagaagaagaagaagaagagcattgaccca
gactctatccacagtgccttgttagcctctggcctgggctccatcaggcctgctttcacc
acccccacagtcaagacctccagcacacctgccatagccaaggtagaggtagatgacagc
tgtatgaccagtcaggatgctgtggaagatgctcagcagatgaagagagatctgttggac
cagctagagaagctggctcaggatctacctcccaacactctggatgaactcatagacgag
ctgggaggacctgacaacgtggctgagatgactgggcgtaaaggccgggtggtcagtaac
gacgatggcagcatctcctacgagtctcggtctgagctggatgttcctgtggagatcctc
aacctcacagagaaacagaggttcatggatggagagaagaacatagccatcatctcggaa
gcagccagctcgggcatctccctgcaggctgaccggcgagtgaagaaccagaggaggagg
gtccacatgaccctggagctaccctggagtgcagacagagccatacagcagtttgggagg
acccataggtctaaccaggtgactgctcctgagtatgtgttcctcatctctgagctggct
ggggaacagaggtttgcctccattgtggccaagagactggagagcctgggtgccctcacc
catggagacagaagagcaacagagacgagagatctcagcaggttcaacttcgacaacaaa
tatggcagaaatgctctggagattgtgatgaagtccatcgttaacctggactttccgtta
gtgaatcctccatcgaacttcgaaggggatttctacaaagagatccttcatgggttgatc
ggagtgggtctgatcaatgtggaggacagatcagggatcctgtctctagacaaagactac
aacaacatagggaagttcctgaaccgtatcctggggatggcggtgcaggagcagaacgct
ctgttccagtacttttctgacacgctggcagccgtcatacagaacgccaagaagaatgga
cgctacgacatgggcattctggacctaggttctggggatgagaaggtgaagaagatggaa
gccaaaaagttcctgactccaggctactccacctccggacatgtggagctctacacggtg
agtgtggagagaggcatgtcctgggaggatgctacccatgcctgggccgagcagagtgga
cccgatgatggcttctatgtacagataaggaacaacaagaagactgctatcttggtgaag
gaggtgaacagtaagaagaggctgttcctggtctacagacccaacacaggcaaacagctg
aaactggaggcctatgctgacatcaagaagaagtgtaaaaaggtgctgtcagatgatgcc
aagcagcactggatcgaccagtaccagtcttcagctgagatctgctctcatgcctactgg
cgtggtaactgtaagaaggtgtcgatgggtctgcagtgtgaggtgggtctgcgctgcagg
acgtactatgtgctgtgtggatctgtgctcagtgtgtggaccaaggtggagggagtcctg
gcctccgtcagcggaaccaacatcaagatgcagatcgttcgtctcaggacggaggacggg
caaaggattgtgggcctgatcattccaattaactgcgtctctcctctgaccaacatcctg
tcgtcgtctgaccagtctcagcaactggccgttcagcagcagcagaagtggcagcagctg
caccctcagagcctcagccacatgcataacatgggttcaccacccagtctgacctga
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