Salmo salar (Atlantic salmon): 106568368
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Entry
106568368 CDS
T04363
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106568368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106568368
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106568368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_RFWD3
NBCH_WD40
Beta-prop_VPS8
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106568368
NCBI-ProteinID:
XP_013994136
UniProt:
A0A1S3LTE2
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Position
ssa13:93041870..93075928
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AA seq
845 aa
AA seq
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MPVGSKKGSVIFSDFRALGLYSNHIPHVVRYHKKHREFYAVTAVGNCFHTYNVKNLGIVA
VSNALPEDISYLATDRMLVYVANGRKVTAFARNKEVVHTYTGHGADVHLLLPFGDHVISV
DRDNVVVVWDVESEEEYLQITFDKVSFEVSALMHPSTYLNKILFGSSQGGFQLWNVKSNK
LLYTFPGWAVGVPVLHVIFLAAGSPVGHIGLWDLEEKKLVCQMRDAHNTAIAGLTFLHGE
PLLITNGADNSIQVWIFDTAGGGGRLLRSCLAHCAPPTKVQHHGLNGHHILSAGRDGTLQ
SFSTVHERFNSLGHGSSNKKKSKKKSLRYDELKLPAITIFASEIARQSDWDSIVACHRGY
LMTNTWNYQKGSMGAHRLEPQRFNKNRALNVHATAVGITSCGNFVVVGLSSGHIDVYNMQ
SSMHRGQYGEDKAHKGPVRGVSVDGLNQLIISAGADKLVKIWKFKPRKLVHSIYLGTSPA
STHLHRDSGMLAIALDDFTLNVLDVETKRIVRKFSGHRGQVNDMSFSPDGRWLITAAMDC
TIRTWDLPSGCLVDCFLVDSAAVSLTMSPTGDFLASSHVDSLGIYLWSNNTLCSMVSLGP
LPSDYEPTVIMLPGICPNQDEEGEEEGDLNSEVIDYESPEQLDQQLVTLSLLPDSRWKNL
LHLDIIKKRNKPKEPPKVPKAAPFFMHTIPGLIPQFDLISVPNGSQSNILNFGVLAQKSA
FYQQLESATLCNKYDGLVGMLKEMGPSGIDAELRGLAPDMGGDVSVLQDFLKMVASMLNS
KRDFDLAQAYLALFLKLHLRLITQEPEFMEEASRVSEKLEEMWTSMQTLFNQSLCLLSYT
KSALL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgggtagtaaaaagggaagcgttatattctcagattttagagcattggggctg
tattcgaatcacatcccacacgtggtacgttaccataagaaacacagagaattctacgct
gtgacagccgtgggaaattgtttccacacctacaatgtcaagaaccttggaatcgttgct
gtcagtaatgcacttccagaggacatatcataccttgcaactgatcgcatgctggtctat
gttgcaaatgggagaaaagtaacagcatttgctaggaacaaagaggttgtccacacgtac
actggccatggagctgatgttcacctcctgcttcctttcggggatcacgttatttctgtg
gacagggacaatgttgtcgttgtctgggacgtggagtcagaggaggagtacctgcagata
acatttgacaaagtgtcatttgaagtgtctgctttaatgcacccaagcacttacctgaac
aagatcctgtttgggagtagccaaggaggtttccagctctggaatgtcaagtccaacaaa
ctcctgtataccttcccaggatgggcagtaggagtcccagtgcttcatgtaatatttctg
gcggctggtagtcctgtcggacatattggactgtgggatctagaggagaaaaagcttgtg
tgtcaaatgagagatgcccacaacacagctattgctggactaacattcctccatggcgag
cctcttctcatcaccaatggggctgataacagcattcaggtgtggatcttcgacacggcg
ggcggaggaggccgtctactcaggagttgtctggcacattgcgccccgcccactaaggtc
cagcaccatggcctgaacgggcatcacattctcagtgctggtcgagatggtactctgcag
tcattctccactgttcatgagagattcaacagtttaggacatggttccagcaacaagaag
aaatccaaaaagaaaagcttgaggtatgacgaactgaagcttcccgccatcaccattttc
gcctcagagattgcccgtcagagtgattgggacagtatagtagcatgtcacagagggtac
ctcatgacgaacacctggaactatcagaagggcagcatgggagcacacaggctggaaccc
caacgcttcaataagaaccgtgctctcaacgtccacgctacggcagtaggtatcacatca
tgtggtaactttgtagtggtaggactctcatctggacacattgacgtttacaacatgcag
tccagcatgcatagaggtcaatatggagaggacaaggctcacaaggggccggtgcgtggc
gtttccgtggatggacttaatcagctgatcatcagtgccggagctgacaaactggtcaag
atctggaagttcaaacctaggaagctggtccactccatttaccttggcacctcgcctgcc
tccacacacctgcaccgggacagtggtatgctggccatcgctctggatgacttcacgctg
aatgttctggatgtggagaccaagaggattgtccgcaagttctctggtcatcgaggacag
gtcaatgacatgtctttcagcccagacgggcgctggttgataacggcagccatggactgt
accatcaggacatgggacctcccctccggctgcctggtggactgcttcttggtagactct
gctgcggtcagtctcaccatgtcaccaactggggactttctggcctcctcccatgttgac
agcttggggatatacttatggtccaacaacacactgtgcagtatggtatcactgggccct
ctgccttcagactacgagcccactgtgatcatgctgccaggaatctgtcccaaccaagat
gaagagggagaggaagagggtgatctcaactctgaggtgatagactatgagtctccagag
caactggaccaacagctggtcactctctctctgctgcctgactctcgctggaagaacctg
ctccacctcgacatcatcaagaaaaggaacaaacccaaggagccccccaaggttccgaag
gctgctcccttcttcatgcacaccattccaggattgataccacagtttgatctcatctcg
gtacctaatggcagtcagtcaaatattctgaattttggagtcctggcacagaagtctgct
ttctaccaacagctagaatctgccacactatgcaacaaatatgatggccttgtggggatg
ctgaaagagatgggtccgtctggtattgatgctgagcttcgaggtctggcccctgatatg
ggtggagatgtctccgtcttacaagactttctgaagatggtggccagcatgctgaactcc
aagagggactttgatctggcacaggcctacctggcactcttcctaaagctgcatctcaga
ctgatcacccaggaaccagagtttatggaggaggcatctagagtatctgagaaactggag
gagatgtggacatccatgcagacacttttcaatcagagtctgtgtttgctgtcatacacc
aagagtgcactgctttga
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