Salmo salar (Atlantic salmon): 106568395
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Entry
106568395 CDS
T04363
Name
(RefSeq) sorting nexin-18-like
KO
K17923
sorting nexin-9/18/33
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106568395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106568395
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106568395
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
106568395
Macropinocytosis
Sorting nexins
106568395
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106568395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Vps5
XFP
Motif
Other DBs
NCBI-GeneID:
106568395
NCBI-ProteinID:
XP_013994178
UniProt:
A0A1S3LT70
LinkDB
All DBs
Position
ssa13:95448900..95453894
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AA seq
571 aa
AA seq
DB search
MAFRARALYDFSSENLGEISITENEVVTLYSEQDIEGWLEGTNSRGDIGLFPASYVEILR
NESSDISSNNNGMSADQGQPDSPSSGYDSSYHSQSYSRAENIKDPTHSAYPVQTPQRHGY
QTSQGSDDDWDDDWDDSSTVAAEPGTKHDNDGTSSTAYTVTTSLPGRRDSAQAKSSATIG
KNLNRFSTFVKSGGEAFVLGEAAAFVKDGDKICVVMGQYGPEWQEDPYPFACSIDDPTKQ
TKFKGMKSYMSYRLTPSHTQSQVNRRYKHFDWLYARLVERFPVISVPHLPEKQATGRFEQ
DFVSKRRKGLIWWMNHMTSHPVLARCDVFQHFLTCPSTDEKTWKMGKRKAEKDELTGANF
FLTISTPVVPLDLQDVENKVDGFKAFTKKMDDNCLVVNATINEFARKQITGFKKEYQKVG
QSFKLLGQAFEMDQQSYSVGLNRAIAFTGEAYEAIGDYFAEQPRQDLDPISDLLDLYKGH
LANYPDIIHVQKGALTKVKECQKQEGEGSTINERCNIISCATLAEIQHFHRTRVRDFKSQ
MQHHLQQQIIFFQKITGKLEEALQKYDEDII
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagggcaagagccttgtacgactttagttcggaaaatctaggagagatatcg
attactgagaacgaagttgttactttatacagcgaacaagacatagagggatggctagag
ggaacaaacagcagaggggatattggtctttttccagcctcatacgtggagattctcaga
aatgaatcatctgacatctcgtccaacaataatggcatgtcggcggatcaaggtcaaccc
gactccccatcaagtggatatgattcatcataccattcccagtcctactctcgtgctgag
aacattaaagatccgacccactccgcttatcctgtgcaaactccccagcgccatggttac
cagaccagtcaaggtagtgatgatgactgggatgatgactgggatgacagctctactgtg
gcggctgagcctggaactaaacatgacaatgatggaactagttccacagcatacacggtg
actacttcgttgcctgggagacgtgacagtgcccaagccaaaagttcagcaacaataggt
aaaaacctcaacaggttctcaacctttgtgaaatctggcggagaggcttttgtattgggc
gaggcggctgcctttgtcaaagatggggacaagatctgtgttgtcatggggcagtatggg
ccagagtggcaggaagacccatacccgtttgcctgctccattgatgaccccaccaaacag
acaaaattcaaaggcatgaagagttacatgtcatacagactgactccctctcatacccag
agccaggtgaatagaagatacaagcactttgactggctctacgctcgacttgtggaacgc
ttccctgtcatctcagtcccccatctgcctgagaaacaggccactgggcgctttgaacag
gactttgtctccaaacgcagaaaaggtttgatatggtggatgaaccacatgacgagccac
cctgtcctggctagatgtgacgtcttccagcacttcctcacctgccccagcacagacgag
aagacgtggaagatgggcaagagaaaggcagagaaggatgagttgactggcgctaacttc
ttcctgaccatctccacccccgttgttccactggacctacaagatgtagagaacaaggtc
gatgggtttaaagccttcaccaagaagatggatgacaactgcctagtggtgaacgccacc
atcaacgagttcgcccggaagcagatcaccggatttaagaaagagtatcagaaagtgggt
cagtctttcaaactgttgggccaagcctttgagatggaccagcagtcctattctgtagga
ctgaaccgtgccatagcattcacaggagaggcctacgaggctataggagactactttgct
gagcagcccagacaggatttggaccccatatcggatctgctggacctgtacaagggacat
ctggccaactatcctgatatcatccatgttcagaaaggtgcccttaccaaagtgaaggag
tgccagaaacaggaaggggagggatcaaccatcaacgagcgttgtaacatcatttcctgc
gccacactggctgagatccagcactttcaccgtacacgcgtacgtgacttcaagagccag
atgcaacaccacctccagcagcaaatcatcttcttccagaagatcactgggaagctagaa
gaggcactgcagaagtacgacgaggatatcatataa
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