Salmo salar (Atlantic salmon): 106568459
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Entry
106568459 CDS
T04363
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106568459
09124 Replication and repair
03420 Nucleotide excision repair
106568459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sasa03051
]
106568459
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106568459
Proteasome [BR:
sasa03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106568459
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106568459
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
CUE
Ubiquitin_4
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
106568459
NCBI-ProteinID:
XP_013994302
UniProt:
A0A1S3LTM9
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Position
ssa13:97814566..97835264
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AA seq
375 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKTLKERIENEKGNDGFPVAGQKLIYAGKILNDDTAIK
DYKIDEKNFVVVMVAKPKAAPAAAQPSGSAATTTTSSTTAPTVPTAASPGSDNPPEGSKP
AEERPCNTSAPASTPTSSSGLLTNVNMFEEATSALVTGQSYENMVTEMMLMGYEREQVVA
ALRASFNNPDRAVEYLLTGIPAGEESHAGADPVVPSVGGGTPALNTGSMTTPASVATGAN
PLGFLVNQPQFLQMRRIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPAQE
GGQGGGGEGGGGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNE
NLAANFLLQQNFDDD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactttgaaaaccctccagcagcagacatttaaaatcgacatagacgaagag
gagacggtaaaaaccttaaaggaaagaattgagaatgagaagggaaacgatggttttccg
gttgcagggcagaaattgatatatgcagggaaaatcctaaatgatgacactgctatcaag
gactataagattgatgagaagaactttgtggttgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccggttctgccgccaccaccaccacctccagcactacagcc
cccacagtacccactgctgcctccccaggctcagataacccaccagaggggtccaaacca
gccgaggagaggccctgcaacacttcagccccagcatcaacccccaccagttcctctggt
ctattgacaaatgtgaacatgttcgaggaggcaacttctgctctggtgacaggccaatcg
tatgagaacatggtgacagagatgatgctgatgggctacgagagggagcaggtagtggca
gcgctcagagccagcttcaacaacccagacagagctgtggagtacctgcttacagggatc
ccagctggggaggagagccatgcaggtgctgacccagtggtgccctctgtgggtggagga
actccagctctcaacacaggcagcatgacgacccccgccagcgttgcaacaggagccaac
cctctggggttcctggttaaccagcctcagttcctccagatgagacggatcatccagcag
aacccctctctgctccctgccttactacagcagatagggagggagaacccccagcttctg
caacaaatcagcagccaccaagagcagttcatccagatgctgaacgagccagcccaggag
gggggacagggtggtggtggagaaggtggtggtggagtgggggttggtggggaggctgga
agtggcatgaactacatccaggtcacaccccaggagaaggaggccattgagcggctaaaa
gctctaggattcccggaaggacttgttatacaggcctactttgcctgtgagaagaacgag
aacttggctgctaacttccttttacaacagaactttgacgacgactaa
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