Salmo salar (Atlantic salmon): 106568467
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Entry
106568467 CDS
T04363
Symbol
capn3
Name
(RefSeq) calpain 3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106568467 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106568467 (capn3)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
106568467 (capn3)
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C2: calpain family
106568467 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
nos_propeller_2
Motif
Other DBs
NCBI-GeneID:
106568467
NCBI-ProteinID:
XP_013994673
UniProt:
A0A1S3LUL0
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All DBs
Position
ssa01:complement(1614959..1669305)
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AA seq
716 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFAALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQGFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNSQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSQHKEPKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLHHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFRSIFQQIAGDEMEITANELKNVLNSIVSKHKDLNTEGFSLESCRSMISLMDVSS
MDGTGRLNLQEFRHLWNKIKQWQGIFQQYNSDQAGSINSYEMRNAVNDAGFRLNNQLYDI
ITMRYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtctggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaagggagcctcagcaagcccctgcgtttcagcggacaggactttgcagcgctg
aaacaggagtgcctcaccaagaagtgcctgtttgaggatgacacctttccagcctccgtg
gagtctctgggatacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggcgccagcaggaca
gacatttgccagggagatcttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagctcctctaccgggtcgttcctcaggaacagggcttctctgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgatgttgttattgac
gaccgcatccccaccttcaacagccagctggtgttcaccaagtctgctgagagaaacgaa
ttctggagtgccctgctggagaaggcctacgccaagcttcacggttcctatgaggccctg
aagggcggcaacaccacggaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tccatgatgggctgctctatcgactccctggttcctgctcgctttgagacccgtactgtg
actgggcttgtgaagggccacgcttactctgtgactgcagttgaagagtgtaagcagtcc
cagcacaaggagcctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaacgggccctggagtgacaactctaaggagtgggtatctctgtctaaaggagagaag
gacaagctccatcatcagagtgctgaggacggtgagttctggatgtcctttgaggacttc
aagaagaactacactaagattgagatctgcaacctgacccctgatgccctggaggacgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtcagaggctgctccgcc
gggggctgtagaaactacccagatactttctggaccaaccctcagtaccgtctgcgtctc
ctggaggaggatgacgacccggaggacaacgaggtggcgtgttccttcgtgatcgctctg
atgcaaaagaacagacggaaagagaggaaaatgggagccaatctcttcaccatcggattt
gccatctacgaggtgccgaaggagatgcacggaaacaaacaacacatgcagaaggacttc
ttcctgttcaactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtacgtgatcatcccgtctacctacgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgaccatccagtgccggccccagccaatgcaggggaggagagt
gaggaagaccagcagttccggagcatctttcagcagatagccggggatgaaatggaaata
accgccaacgagctgaagaatgtcctcaacagtatcgtctccaaacataaggacctaaac
acggagggttttagcctggagagctgcaggagcatgatctctctcatggacgtatcctct
atggacgggactggcagactcaacctgcaggagttcagacatctctggaacaagatcaag
cagtggcagggaatcttccaacagtataactcggatcaggctggtagcatcaacagctac
gagatgagaaatgctgtcaacgatgcaggcttccgtctcaacaatcagctctatgacatc
atcaccatgcgttacgccaacgagggcatgaacatcgactttgacagcttcatcagctgt
ctggtccggctcgaagccatgttcagggcattccaggccttcgaccaggatggagacggt
acgatcagactcagtgtcttggagtggctccagttgaccatgtacgcctag
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