Salmo salar (Atlantic salmon): 106568500
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Entry
106568500 CDS
T04363
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04130
SNARE interactions in vesicular transport
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106568500
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106568500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106568500
Membrane trafficking [BR:
sasa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
106568500
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Motif
Other DBs
NCBI-GeneID:
106568500
NCBI-ProteinID:
XP_013994383
UniProt:
A0A1S3LTR5
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Position
ssa01:complement(137987239..137999779)
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAYDLSSFSFFQKSSVQEFMTFTSDLIVQRSPIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLDRGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgcctacgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgcctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtgaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagttggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggacagaggagagaagctggatgatctagtacagaagtcagaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
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