Salmo salar (Atlantic salmon): 106568642
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Entry
106568642 CDS
T04363
Symbol
ift57
Name
(RefSeq) intraflagellar transport 57
KO
K04638
intraflagellar transport protein 57
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106568642 (ift57)
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
106568642 (ift57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
TPR_IF140_C
HBM
ISG65-75
MCPsignal
DUF3837
Med9
DUF1664
Motif
Other DBs
NCBI-GeneID:
106568642
NCBI-ProteinID:
XP_013994611
UniProt:
A0A1S3LUS7
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Position
ssa14:complement(3978133..3990629)
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AA seq
414 aa
AA seq
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MVDDNRRGDDERGPGAAYQMFVVMEDLLDKLKLLDYEEEVLAKHNMKPLSRHYFASSAYM
PSNPGEQFFMFTIIASWLINAAGRPFEQPQEYDDPNATVSNILSQLRAFGGLVDFPPSKL
KAGSGEHVCYVLDRLAEEALKERVFSWRRPNYPTEEMEEESVMEDDAELTLSKVEEEMTE
EPDDYEEENVMDLEALKSRSNQSEARLSSKPDNILESNMDAAEWNLEVERVLPQLKVTIR
TDHKDWRIHVDQMHQHKDGIKSSLKEAKGYLDKLQEEIGKTLEKVGSREKYINNQLEHLI
QDYRSAQSKLSEARECYKQGSGGVTERTRVLAEITEELEKVKQEMEEKGSSMSDGAPVVK
IKQSLTKLKQEIVQMDIRIGVVEHTLLQAKLKEKSNMTRDMHATNIPEPAIGAY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgacaatagacgaggggacgatgaacggggtcctggagcggcatatcaaatg
ttcgtggttatggaggacctgctggacaaattgaagcttctggattacgaagaggaagtt
ctggcaaagcacaacatgaaacctctatccaggcattattttgcatccagtgcctacatg
ccatcaaatccaggggagcaattcttcatgtttaccataatcgcgtcttggctcatcaat
gcagcagggagacccttcgagcagccccaggagtatgacgaccccaacgccactgtatcc
aacattctctcacagttgagagcttttggaggactggtagactttcctccctccaaacta
aaagctggttcaggggaacatgtttgctatgtgctggatcggctggctgaagaggctctg
aaggagagagtgttttcctggagaagaccaaactaccctacagaggagatggaagaagag
tctgtgatggaggatgatgcagagctgactctcagtaaagtggaagaggagatgacagag
gaaccagacgactacgaggaagaaaacgtcatggatctagaggcacttaaatcaaggagc
aatcaaagtgaggccagactatcttcaaagccagacaatatactggaatcaaacatggac
gctgccgagtggaatctagaggtcgagcgggttctcccacaactgaaggtcacaatcaga
acagaccacaaggactggaggatccatgtggaccaaatgcatcagcacaaagacgggatc
aaatcatctctcaaggaggccaagggctacctagacaaactgcaggaggagatcggtaag
accctggagaaggtgggcagcagggagaaatacatcaacaaccagctggaacaccttatc
caggactaccgcagcgcccagtccaaactcagcgaggcaagggagtgctacaagcaggga
agtggtggagttacagagaggaccagagttctggctgagatcacagaggagttggagaag
gtgaagcaggagatggaggagaagggcagcagtatgtctgatggagccccggtggtgaaa
atcaagcagagtctgaccaagctcaagcaggagattgttcagatggacattcggatagga
gtggtggagcacacactactgcaggccaagctaaaggagaagtccaacatgactcgagac
atgcacgccaccaatatcccagagcctgccatcggcgcatactga
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