Salmo salar (Atlantic salmon): 106568667
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Entry
106568667 CDS
T04363
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106568667
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106568667
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
106568667
NCBI-ProteinID:
XP_013994664
UniProt:
A0A1S3LVQ7
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Position
ssa01:139245472..139448320
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AA seq
1654 aa
AA seq
DB search
MDTPLTTPLLLTLLLRSLSLFHGAMDSCYDDNEGVPSRCMPKFENAAFNRTVMASNVCGS
PPEDYCMQTGSTRSCHHCKVSDPGLSHNASLLTDFHTDEEPTWWQSQSMFYGVQHPNSVN
LTLHLSKAFEITYVRLKFYTSRPESFAIYKRTSEDGPWMPYQYYSASCTKTYGKNAKGYI
RPGDDERMAVCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAILQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTVGV
DCQRCHPFYQDRPWARATGDSANQCMKCNCSGRADVCVFDAEQYRSTASGGRCVDCRDQT
DGPHCERCRENHYRRSPQDPCSPCDCNTMGSVSLQCGVEGKCECRPSVTGEKCDTCQPGF
HSLSPGGCRLCDCDRRGSVGVCSVLDGGCHCRANVEGQACDRCKPGSFNLQENNPAGCTP
CFCFRHSLACRSSNHHAAVNITSDFLEDTDGWSGQFSGGQEYPLLWKEGEVYLLPLSEDD
LGFYRAPERFLGNHLLSYGQLLSLTFTAEAQYLLPHSVTVLLEGSGTTLSADLSPQHGPV
HQPGLAPQHTFTLRLHKEETRLRPSLSAFQFHHLLFNLTAIQISNAGGHNYTSQLSGVTL
ASAAPFSSPVTPSTPPAPWVEVCTCPPGFGGQFCELCAPGFSREVPNGGPLSPCVPCTCH
QHGPCHPETGVCVCIDFTTGPTCERCLDGYYGNALIGTPNDCRPCPCPDRTSCAQMTETG
EVVCTNCPSGQRGIRCEMCEDSFHGDPLGQSGPVQPCEKCDCNDNVDPNALGVCDHMTGH
CLKCLGHTEGDHCQRCRQGYYGDALNRTVAQKCKRCGCSPAGTSGSLEDCDPQTGSCLCL
IHVTGRDCGQCEVGFFNLQSGVGCERCTCNPIGSSSMACHQITGQCVCRLGVEGRLCSTC
RMGFFGFSSRGCRACNCDPMGSSSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQC
EECPVCYGLVKEQAGRLKARLQDLENLLARFDCRSGYGHYHHVREYHMRQLHERQHHERG
HQGEDSLPNALEDFLAIQEAKEALVKQFALMETSTHTLSAQLHNVTPAMNCSASMEEEQE
EEKKEEGKEDRRRTLCSTLADAVSVVRSAQTQLKQATLDLDNMVIPFEVPPVPNRWNLAV
NQSEVLMKSHTEMSGRIESIATKAFMASNQTYSLLMDLLEDNSTKEYISNLTEQLADMQQ
IKENLTAQVNRTLANQLSLEEESADVLVALGNLTSSLLELSQRRPKSTSGTNQSDLRPTQ
GYNQSHPSLAPSANQLEDVELSNRTAELAFNVQSKEELVNKIREEMEPRIQTAHNNMAAV
KDIYKLTAHAQGSKVLALSSVVTGKEMESEAIALWRELEDMQREWPRRQAQTKAALKKET
LLREKVLEDINKKVNQTERVLRPALDNATLSNATAEQAGHTAHALSKEAKATLTKAKYAR
TASAQLSSSVDTALQQLAELENHTAQAQAQLNLEPVETLTSVKGDIQAAKFQLEAYSLTL
TQLISNMDGSMVLEQFDRILSETAVRLGVLRGSVESPALNMKIQTLWSAARDQKSQLTHL
EQDLQEIRQERDSLKDIALHLPQTCTQASGIEGH
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggataccccactgaccaccccactcctcctcaccctcctccttcgctcgctctccctc
tttcatggggccatggactcctgctacgatgacaacgagggtgtcccaagccgctgcatg
cccaagtttgagaacgcagccttcaaccgcacggtcatggcctctaacgtgtgcggttca
cccccggaggactactgcatgcagacgggctcgacgcggtcctgccaccactgtaaagtg
tcggacccaggcctcagccacaacgccagcctgctgacggatttccacacggatgaggaa
cccacctggtggcagagccagtccatgttctacggagtccagcaccctaactctgtaaac
ctcaccctgcacctcagtaaagcctttgagatcacctacgtgcgcctcaagttctacacc
agtcgaccggagagctttgccatctacaagcgaacaagtgaggatggaccatggatgccc
taccagtactacagcgcctcctgtaccaagacctatgggaagaacgccaagggatacatt
cgcccgggggacgatgagaggatggcagtctgtacagacgagttcagtgacatctcccct
ctgaccgggggcaatgtggccttctctaccctggagggacgacccagcgcatacaacttt
gaccagagcgccatcctacaggagtgggtgacagccactgacctgctcatctctctggac
aggctcaacacattcggagatgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctccgatttctccgtaggcgccaggtgtaagtgtaacggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacactgtcggggtg
gactgccagaggtgtcacccattctaccaggataggccttgggccagggccaccggagac
tctgccaaccagtgtatgaagtgtaactgtagtgggcgagcggatgtgtgtgtgttcgat
gcggagcagtatcgcagcacagccagtggggggcgctgtgtggactgtagggaccagact
gatggaccgcattgtgaacgctgtagagagaaccactaccgacggtcaccacaggacccc
tgcagcccctgtgactgtaacaccatgggttctgtgagtttgcagtgtggtgtggagggg
aagtgtgagtgcagacccagtgtgacaggggagaagtgtgacacctgtcaacctggtttc
cactccctcagccctggcggctgcaggttgtgcgactgtgaccgtaggggcagtgtgggc
gtctgctctgtgctggatggtggctgtcactgcagggctaacgtggaaggacaggcgtgt
gacaggtgtaagccaggctccttcaacctgcaagagaacaatccagctggctgtacgccc
tgtttctgcttcagacactcattggcctgcagatcgtccaatcaccatgcagctgtcaac
atcacatcggacttccttgaagacacagatggctggtcaggacagttctccgggggacag
gagtatcctctgctgtggaaggaaggggaggtctacttgctaccactcagtgaggatgat
ctcggcttctacagagctccagagaggttcctggggaaccatcttctgagctacggccag
ctcctttccctgaccttcacagccgaggcccagtacctcctccctcacagtgtcacagtg
ctcctggaaggatcgggaaccaccctgtcagctgacctttcaccccaacatggacctgtc
caccagccgggcctcgctccccagcacaccttcactctcagacttcacaaggaggagacg
aggctgaggccttctttgtctgccttccagttccaccatcttctcttcaacctcactgct
atacagatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcttccgctgcccccttctccagtcctgttaccccctctaccccccctgctccctgggta
gaggtgtgtacatgccctcctggatttgggggtcagttctgtgagctctgtgccccagga
ttcagcagagaggtccctaatggaggacccctgtctccctgtgtgccctgcacctgccac
cagcatggaccctgccaccctgagacaggtgtgtgtgtgtgtatcgacttcaccacagga
ccaacctgcgagcgttgtctggatggttactatggcaacgcgttgattggcacgcccaat
gactgcagaccttgcccctgcccggaccgtaccagctgtgctcaaatgacggagacgggg
gaggtggtctgtaccaactgcccttcaggacagagaggcatcagatgtgagatgtgcgag
gacagtttccacggcgaccccctgggccagtcagggccagttcaaccgtgtgagaagtgt
gactgtaacgataatgtggaccccaacgcgctgggcgtgtgtgatcacatgacgggccat
tgcctgaagtgcctgggacacaccgagggagaccattgccaacgctgccgacaaggttac
tatggggacgccctgaaccgcactgtggcccaaaagtgcaaacgctgtggctgcagtcct
gcagggacttctgggtcgttggaggactgtgacccccagacaggaagttgtctgtgcctt
attcatgtgaccgggcgagactgtggtcagtgtgaggtgggcttcttcaacctgcaatct
ggagtaggctgtgagaggtgcacctgtaaccccattggctcatcttccatggcttgccac
caaatcacaggccagtgtgtgtgtcggctgggagtggaggggcggctgtgcagcacatgt
cgtatgggcttctttggtttttcctcacggggctgcagagcctgtaattgcgacccaatg
ggttccagctccatgcagtgccacaccaacggcacctgtccctgccgccagggcttcgtg
gggtacaagtgtgaccaatgtgagctcaactacttccacaacagagccacacaccagtgt
gaggagtgccctgtctgctatgggctagtcaaggagcaggcagggaggttgaaggctcgg
ttgcaggatttggagaatctcctagcacgcttcgactgccggagtggctatgggcactac
catcatgtgcgcgagtatcacatgcgacagcttcacgagcgacagcatcatgagcgtggg
catcaaggggaggacagcctgcccaatgcgctggaggacttcctggctatccaagaggca
aaggaagccttggttaaacagtttgctctcatggagacgtctacacacactctctcagcc
cagctgcacaatgttaccccagctatgaactgtagtgccagcatggaggaagagcaggag
gaggagaaaaaggaggaggggaaggaggacaggcggagaacattgtgtagtacccttgct
gatgctgtatccgtggtcagaagtgctcagacacagctgaagcaggcaacactggacctg
gacaacatggtcattcctttcgaggtgccaccggtgcccaaccgatggaacttagcggtg
aaccaatcagaggtccttatgaaaagccacacagagatgtctggtcgtatagagtctata
gctaccaaggcattcatggcctccaaccagacctactctctactgatggacctactggag
gacaactctacaaaggaatacatcagcaacctcacggagcaactggcagacatgcagcag
ataaaggagaatctgactgcccaagtgaatagaactctagccaatcaactgtctctggag
gaggagtctgctgatgtcttggttgccctaggtaacctcacctcctccctattggagctg
tcccagaggaggcccaaatccacatcaggaaccaaccaatcagatctcagaccaacacag
ggttacaaccaatcacaccccagcctcgcaccatctgccaatcaattagaggatgttgag
ctaagcaacaggacagctgagctggcgtttaatgtccagtctaaagaggagctggtcaat
aagatcagagaggagatggagcctcgcatacagaccgctcacaacaacatggccgctgta
aaggatatttacaagctgacagctcatgcccaggggtcaaaggtcctggccctgtcatcg
gtggtgacagggaaagaaatggagtcagaggccatcgccctgtggagagaactggaagac
atgcagagagagtggcctcgaaggcaggcccagaccaaggctgctctgaagaaggagacg
ctgctgagggagaaggttctggaagacatcaataagaaggtgaaccagacagagagagtc
ctgaggcctgccctggataacgctaccctctccaacgctaccgcagaacaggcaggacac
actgcacacgccctgtctaaagaggccaaggccaccctgaccaaggccaagtacgcgagg
acagcgtctgcccagctcagctcctctgtggacacagccctgcagcagctggctgagctg
gagaaccacactgcccaggcacaagctcaactcaacctagagcctgtagagactctgacc
agtgtgaagggggacatccaggcagctaagtttcagctggaggcctattcactcacactc
acccagctcatcagtaacatggatgggagcatggtgctggagcagtttgaccgtatcctg
agtgagacagcggtgcggttgggtgttctgcgtggcagcgtggagagccctgccctgaac
atgaagatccagaccctatggtcagctgcccgggaccagaagagccaactgacccacctg
gaacaggacctgcaggagataaggcaggagcgagacagtttgaaggacatcgccctgcac
ctgccccagacctgcacccaggcctcggggatagagggacactag
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