Salmo salar (Atlantic salmon): 106568770
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Entry
106568770 CDS
T04363
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106568770 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106568770 (hnrnpu)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
hnRNP proteins
106568770 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Zeta_toxin
SRP54
6PF2K
Motif
Other DBs
NCBI-GeneID:
106568770
NCBI-ProteinID:
XP_013994929
UniProt:
A0A1S3LWF9
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All DBs
Position
ssa01:complement(14797024..14810168)
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AA seq
790 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRQLSDKGLKADLMDRLQAALNEEALAGGAETGENGGQGEG
AVGLNDMGEEDLAEDLVEERMEADGVEDEDKCEGKAEKECANIDDDMGEEEDAGVDMDKS
DEDEDALLKEEEDDDDEEMDKFDDDDAALGTLPREGDADKDTSAEQKNKKGVKRRREEHG
RGYFEFIEESKYSRAKSPQPPLEEEDEEFDDSTVCLDTYNSDLHFKVSRDRYSASSLTME
SFAYLWAGGRASYGVAQGKACFEMKIIEKIPVKHISSKGMDIHEVLVGWSLANGTLLLGE
EEHSYAFSAKGKKTTNCVTEDFGECFDENDVVGCLINFEGSEVELSFSKNGQDLGVAFKV
DKASLDGRPLLPHVLCHNCAVEFNFGQREAPLFVPPAGYSFLQQVPVGKRVRGPKGPDTK
DDCEVIVMVGLPGAGKTTWVTKHTQEHPGKYNILGTNTILEKMMIASLKRQMKDVTKLTA
ISQRAPLFLGKFIEIAARKKRNYILDQTNVSAPAQRRKMCLFAGFQRKAVVVCPTDDNYK
QRTQKKAETDGKDVPEHAVLKMKGIYTLPEPGDCFSEVSFVELQKDEASKLLDLYKEESR
SALPPEKKANQGGTPPKRGGSHRGRGGRGQGQWGGGQGQRGGRGGFQIRGNFRGGPGPRG
GFSRPPRGFLPPPAFRGGFSNRGNFNRGSGGMPSRGGGPRGGPGRGNMGGNRGGNMHRGS
MTRGGGGGGRGRGDNRGNFTQKFRGRGGNNRSFNKNSNFGMNKAQAFNQSWQQGFWNQKP
WSQQYHPGYY
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatcaacgtgaagaaattaaaggtaaacgagttgaaggacgagttgaagaag
aggcagctgtcggacaaggggctgaaggcggatcttatggaccggctgcaggccgcgctg
aatgaagaggctctagccggaggagcagagaccggggagaacggcggccaaggcgaaggg
gctgtcggcctgaatgacatgggcgaggaggacttggctgaagacctggttgaggagagg
atggaggcggacggagtagaggatgaagataagtgcgaagggaaagcagagaaagaatgc
gccaatatcgacgatgatatgggggaagaggaggatgcgggagtagatatggataaatcg
gacgaggatgaagatgctctactgaaagaagaggaggatgatgatgatgaggagatggat
aaattcgatgatgatgatgctgcactagggactctccctcgagagggggatgcggacaaa
gacacgagcgctgagcagaagaataagaagggtgttaagagacgccgggaggaacatgga
aggggctactttgagtttattgaagaaagcaagtacagccgggccaagtccccccagccc
cccctggaggaagaggacgaggagtttgacgacagcactgtctgcctggacacctataac
agtgacctgcacttcaaggtgtcccgggaccgttatagcgcgtcatccctcaccatggag
agctttgcctacctgtgggctggaggcagggcttcctacggagtagctcagggcaaggcc
tgctttgagatgaagatcattgagaagatcccagtgaaacatatctccagtaaaggcatg
gacatccacgaggttctggtgggctggtcactagccaatggaacactgttactgggagaa
gaggaacactcgtatgccttctctgccaaagggaagaaaaccaccaactgtgtcacagaa
gacttcggagagtgcttcgatgaaaacgatgtcgtcgggtgcctaattaactttgaaggc
tcggaggtggagctgtcgttcagtaagaacggtcaggaccttggcgtggccttcaaggtg
gacaaggcatctctggacggacggcccctcctccctcacgtcctctgtcacaactgtgct
gtggagttcaacttcggccagagggaggcgccactgtttgtcccaccggccggctacagc
ttcctacagcaggtccctgtgggcaagagggtccgaggccccaaggggcctgacactaag
gatgactgtgaggtgatcgtgatggtaggcctgcctggcgctgggaagacgacgtgggta
accaagcacactcaggagcaccctgggaaatacaacatcctgggaaccaacaccatcctg
gagaagatgatgatcgccagtctgaaacgccaaatgaaggatgtcaccaaactcaccgcc
atctcccagcgtgcacctcttttcctgggaaaattcattgagatcgctgcacgcaaaaaa
cgcaactacatccttgaccagaccaatgtgtcggccccagcccagaggaggaagatgtgt
ctgtttgcaggattccagaggaaggccgtggtggtgtgtcctactgatgacaactacaag
cagaggacacagaagaaagccgagacggacggtaaagacgtccccgagcacgctgtactc
aagatgaaaggtatctacaccctgccggagccaggggattgcttcagtgaggtgagcttc
gtggagctgcagaaggacgaggcctccaagctgctggacttgtacaaggaggagagtcgc
tctgccctgcccccagagaagaaggccaaccaggggggcacgccgcccaagagagggggc
agccaccgcggccgtgggggcagagggcaggggcagtggggaggaggtcaggggcagagg
gggggcagaggaggcttccagatcagaggcaacttcaggggaggcccaggccctcgtggt
ggattcagtcgtccccccagaggtttcctccctcctccggccttccgagggggcttctcc
aaccggggcaacttcaacagggggagtgggggcatgcccagcagggggggtggacccagg
gggggtcctggaaggggcaacatggggggtaataggggtggcaatatgcaccgaggcagc
atgacccgcggaggaggtggaggtggaagaggacgtggggacaacaggggcaacttcaca
cagaagttcagaggcagaggaggcaacaatcgcagcttcaacaagaacagcaactttggc
atgaacaaggcccaggccttcaaccagagctggcagcaggggttctggaaccagaagcca
tggagccaacagtaccacccaggatactactga
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