Salmo salar (Atlantic salmon): 106568813 Help Entry 106568813         CDS       T04363                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sasa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     106568813  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sasa00536]     106568813 Glycosaminoglycan binding proteins [BR:sasa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106568813 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  106568813 NCBI-ProteinID:  XP_013994958 UniProt:  A0A1S3LVE9 LinkDB All DBs Position ssa01:139967288..140104174 Genome browser AA seq 2028 aa AA seqDB search MDTHIRWKVKRRIKDSQITLAILLLFVTSQASSVEPADLLKILDFPSLPEGVTKTTGFCA HRKSTKGADVAYRVSKEAQLSAPTKQLYPADVFPEDFSILATVKPKKGSQSFLLSVYNEQ GIQQLGVEVGRSPVFLYEDHMGKPSPEDYPLFRGLNLADGKWHRVAISVHKQSITIILDC KKKTTQKLSRSPHPIIDTKGIVVFGTRILDEEVFEGDIQQLLIVADHRAAYDYCEHYSPD CEVPVPEQPQAQDPNTDEYNTEEDSYYYEYPYYEDMDGKPSESTSETETDEQAGPATEDV KVSVPESGRVVTSVKEVVSSVKDTTSQGVEGKVLTAISAGSASAGAAGAGATGEEAYGEE TSPYDGYDTDSYGNYESYYDESTATPDGTRRVTISSSSTGTGAGVELDLGLGSKFDLGTG AEFEKVITSSGGVTITRNKTSAGTGYDDNYGEGYDLSYGEGEGEEYSIGGGGHDSRTSSS SSTVEIGTGGGGGGSVSVGGGSVSVGGGSVSVGGGSVSVGGGSVSVGGSASAGGGTARAG AGAGDSVATGAGGQGVAIEGDYTDLEGDRFKEESISEYGDADYGYGDLDYGGQEEKVLPA ETDEYYGQVDGSRGEKGQKGEPAIIEPGMLVEGPPGPEGPTGLPGPPGSSGPPGSHGDAG ERGPNGRAGLPGADGLPGPPGTVLMLPFRFSSGGDSGQKGPQVSAQEAQMQAIMQQARLA MRGPTGPMGLTGRSGPLGSPGVAGLKGESGESGPQGPRGPLGSHGPSGKPGRRGRAGSDG ARGMPGQTGTKGDRGFDGLAGLPGEKGHRGESGPHGPPGPTGEDGERGDDGEIGPRGLPG DPGPRGLLGPKGPQGPPGSPGVTGMDGHPGPKGNIGPQGEPGPNGQQGNPGAQGLPGPQG AIGSPGEKGPTGKSGLPGIPGADGPPGHPGKEGPNGEKGHLGPAGPQGPIGYPGPRGVKG ADGVRGLKGGKGEKGEDGFPGFKGDMGIKGDRGELGPAGPRGEDGPEGPKGRSGLPGDAG PLGPNGEKGKLGVPGLPGYPGRPGPKGSQGFQGFPGANGEKGTRGLAGKAGPRGQRGPTG PRGERGPRGPTGKAGPKGTSGSDGPPGPPGERGLPGPQGPTGFPGPKGPPGPAGKDGLPG HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGSAGKEG AKGDPGPAGPAGKDGPPGLRGFPGERGLPGPVGAHGLKGNEGPNGPPGPAGSPGERGPAG PAGPTGLPGRPGPQGPPGPAGEKGGPGEKGPQGPAGRDGVQGPVGLPGPAGPLGPPGEDG DKGEIGEPGQKGGKGDKGEHGPPGPTGPQGPVGAPGPAGADGEPGPRGQQGLFGQKGDEG SRGFNGPPGPVGLQGLPGPAGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPPGGIG NPGSVGEKGDSGENGEPGLQGELGGPGPRGERGEKGESGPAGSAGPPGPKGPPGDDGPKG SPGPSGFPGDPGPPGEIGQAGLDGPPGDKGDDGEAGQPGSPGPTGESGPSGPPGKRGPHG TTGPEGRQGEKGAKGESGLEGPQGKTGPVGPQGAPGKQGSEGLRGIPGPVGEQGLPGSSG PDGPPGPMGPPGLPGLKGDSGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGTSGPKG DNGIAGPSGPLGPLGPPGLPGPPGPKGAKGSSGQTGPKGETGIPGQPGPPGPPGDVIHPL PMQSSPKRSRRNIDASQMMDDANADANYKDYDDGMEEIFGSLNSLKLEIEQMKHPLGTQG NPARTCKDLQLCHPDFPDGEYWIDPNQGCSRDSFKVHCNFTAGGESCIYPDKKSEGTRLT SWVKEIPGSWFSEFKRGKLSKMAKWPKDSPGSWYSRYKRGSLLSYVDAEGNPIGVVQMTF LRLLSAAARQNLTYNCYQSVAWHNQDGDSYDKAIRFLGSNDEEMSYDNNPYIRAVVDGCA LKKGYEKTVLEINTPKVEQVPFVDIMFNDFGGATQKFGFEVGPVCFIG NT seq 6087 nt NT seq  +upstreamnt  +downstreamnt atggatacacatataagatggaaagtaaaacggaggataaaggactcgcaaatcacttta gcgatacttctactttttgtcacatcacaagccagttcagtggagccagcggacctcttg aagattttagattttcccagtttacctgaaggcgttactaaaaccacaggtttctgtgcg cataggaagtcaacaaaaggagccgatgtagcctacagagtatccaaagaagcccagctc agcgcccccaccaaacagctgtaccctgctgatgtgtttcctgaggacttctccatcctg gctacagtgaagcctaagaagggctcccagtccttcctgctgtctgtgtataacgagcag ggtatccagcagcttggggtggaggtgggacgctctcccgtcttcctgtatgaggaccac atgggtaaacccagcccggaggactaccccctcttcagaggtctcaatctggccgatgga aagtggcaccgagtggccatcagtgttcacaaacagagcatcaccatcatcctggactgt aaaaagaagaccacccagaaactgtccaggagcccacaccccatcatcgacaccaaagga attgtggtcttcggaactagaatacttgatgaagaagtctttgagggagacatccagcag ctgttgattgtggcggaccaccgtgctgcctatgactactgtgaacactacagccccgac tgtgaggtccctgtcccagagcagccccaggcccaggaccccaacacagacgaatataac acagaggaggacagctattactatgagtatccttactatgaggacatggatgggaaacct tccgagtccacctccgagactgagactgacgaacaagctggacctgccacggaagacgta aaggtgtccgtgccagagagcggccgtgtggtcacctcagtcaaagaggtggtgtcatca gtcaaggatacaaccagtcagggagtcgagggcaaagtgttgaccgccatttctgccggc agcgcctctgctggagccgcaggagccggagccaccggcgaggaggcctatggggaagag accagcccttacgacggctatgatacggatagttatgggaactacgaatcatactatgac gagtccacggccacgcccgacggcactcgcagagttaccatcagcagctcgagcacgggg accggcgcaggggtggagctggacctggggctggggtcaaagtttgacctgggcacggga gcggagtttgagaaggtcatcaccagtagtggaggagtcaccatcacacgcaacaagacc tcggctggaacaggctacgatgacaactacggtgagggctatgacctgtcctatggagag ggagagggagaggagtacagcatcggtggcggtggccacgacagcagaaccagcagcagc agcagtactgttgaaatcggtactggtggtggtggtggtggatctgtatcagtcgggggc ggttctgtttccgttgggggcggttccgtttccgttggtggtggttccgtttccgttggg ggcggttccgtctctgtaggtggatctgccagcgccggaggtgggacggcaagagcagga gctggagctggggattcggttgctacgggagccgggggccagggtgtggctattgaggga gactacactgatctggagggtgatcggttcaaagaggagtccatctctgagtatggggac gcagactatggttatggagacctggactacggtggacaggaggagaaggtgctgccagcc gagacagacgagtactacggacaggttgatgggtctcggggagagaagggacagaaggga gaacctgctatcattgagcctggaatgctggtggagggtccgcccggtccggaaggccca acaggtctccctggacccccaggttcctccggccccccaggcagccacggagacgcagga gaaaggggtcctaatggtcgtgctggtcttcctggcgctgatggtctgccaggacctcca gggactgtcttgatgctgcctttccgcttcagttctggaggagactctggacagaaggga cctcaggtgtctgctcaggaggcccagatgcaagccatcatgcaacaagctaggctggcg atgcgtggtcctactggccctatgggtttgacaggtagatctggtcctctgggttctcca ggtgtggctggactgaagggagagtctggagagtccggtcctcagggacctcgtggacca ttgggttctcatggaccctctgggaagcctggcagaaggggacgtgctggttctgatgga gccagaggcatgcctggtcagaccggaaccaagggagacagagggtttgatggtttggct ggacttcctggtgagaagggacacagaggtgaatctggaccccatggacctcccggaccc acaggagaggatggagagagaggagacgatggagagatcgggccacgggggctgcctggt gacccaggacctcgtgggttgctgggacctaagggacctcaaggacctcccggatcccct ggtgtaactggaatggatggccaccctggacccaaaggaaacattggaccacaaggagaa cctggccccaatggacagcaagggaaccctggtgctcagggacttccaggtcctcaggga gccatcgggtctccaggagagaaggggcctaccggaaaatcaggactgccaggaattcca ggagctgatggacccccgggtcaccctggcaaggaaggacccaatggagagaaaggacat ttgggtcccgcaggcccccaaggcccaatcggttatcccgggccccgaggcgtgaaggga gccgacggtgtacgaggcctgaaaggaggaaagggtgaaaagggagaagatggattccct ggcttcaagggagatatgggaatcaagggtgacaggggtgagctgggacctgctggaccc agaggagaggacggacctgaggggcccaagggtcgctccggtcttcctggagatgctggc cctcttggacccaacggtgaaaagggcaaactgggtgttccagggttgccaggatatcca ggaagaccaggaccaaagggatctcagggtttccaaggtttccccggagccaacggagag aaaggaacaaggggacttgcagggaaagctggcccaagaggacagagaggaccaacggga cctcgtggagagaggggaccaaggggaccaacaggaaaagctggaccaaagggtacctca ggaagtgatggccccccaggacctcccggtgagaggggtcttccagggcctcaaggacca acaggattccctggaccaaagggcccacccggacctgctgggaaagatggtctgcccgga caccctggacagagaggagagactggtttccaaggcaagactggcccacctggaccccca ggagtggttggacctcagggccccacaggtgagactggaccaatgggagagcgtggccat cccggacccccaggcccacccggtgagcagggtcttcctggatctgctggtaaagaggga gctaagggtgaccccggtcccgctggcccggctggtaaggatggtccccctggtctgaga gggttcccaggagagagaggtctgcctggcccagtgggggctcacggcctgaaagggaat gaaggccccaacggcccacctggacctgctggttcccctggtgagcgtggtcctgctggc ccagccggacccactggtctccctggacgaccaggacctcagggaccccctggacccgct ggagagaagggtggaccgggtgaaaaaggaccccaaggccctgccggtagagatggtgtc cagggacctgttggtctgcctggcccagctggacctctcggacccccaggagaggatgga gacaagggagagattggagagccaggtcagaagggaggtaaaggagacaaaggagagcat ggtccacctggtcctactggtccccaaggcccggttggagcgcctggtcctgctggagct gatggagagcccggtcccagaggtcagcagggtctgtttggccagaagggagatgaagga tccagagggttcaatggaccccctggcccagtgggactgcagggattacctggtccagcc ggcgagaaaggagaaaccggagacgttggtcagatgggtcctcccggtcctcctgggccc agaggcccctccggacccccaggagctgacggccctcagggacctcctggtggtattgga aaccctggatctgttggagagaagggtgactcaggtgaaaacggagagcctggtcttcag ggagaacttggcggacctggcccaagaggagagcgaggagagaagggagagtccggtcct gcaggttctgctggaccccccggccctaaaggtccccctggagatgacggtcctaaagga agtcctggtccaagtggtttccctggtgatcctggtccccctggcgagatcggacaggct ggtttagacggtcctcctggtgacaagggagacgacggagaggctggtcaacctggttct cctggacccaccggagagtcaggtccttctggcccaccaggaaagagaggcccccatggt acaactggacccgagggcaggcaaggagagaagggagccaagggagagtctggtctggag ggcccacagggcaagacaggccccgttggtcctcagggagcacctggcaagcaaggttct gaaggtctcagaggtatccctggcccagttggggaacaaggtcttccagggtcctcaggc cccgacggaccccctggacccatgggtcctccaggattaccaggtttgaagggagactct ggcattaagggagaaaagggccaccctggtctgatcggtctgatcgggcccccaggagag cagggagagaagggtgacagaggtctgccaggcccccaggggacatcaggacccaaagga gataatggtattgctggcccctcaggtcctcttggtcccctgggacctccaggattacca ggtcctcctggtcctaaaggagctaaggggtcatcgggtcaaactggtcccaagggagag actggtattcctggacaacctgggcctcctggtccacctggggatgtcatccacccactg cccatgcagtcgagccccaagcggagccgcaggaacatcgatgccagccagatgatggac gatgccaatgcagatgccaactacaaggactacgacgatggaatggaggagatcttcgga tcccttaactccctcaagctggagatcgagcagatgaagcacccgctgggaacacagggc aaccccgcccgcacctgcaaggacctgcagctctgccaccctgacttccccgacggtgaa tactggatcgaccccaaccagggttgctcgagggactctttcaaggtccactgcaacttc acagcaggaggagagagctgtatctaccctgataagaagtcagaagggactaggctcacc tcctgggtaaaggagatccctggctcctggttcagtgaattcaaacgtggtaaactgagc aaaatggcaaaatggcccaaagactccccaggctcttggtatagtcgctacaagcgaggt tccctgctctcgtacgtggacgctgagggaaaccccattggtgtggtccagatgaccttc ctgcgtctgctgagcgcggccgcccgccagaacctcacctacaactgctaccagtcggtg gcctggcacaaccaggacggggactcgtacgacaaggccatccgcttcctgggctccaac gatgaggagatgtcctacgataacaacccctacatcagagccgtggtggacggctgtgcg ttgaaaaagggctatgaaaagacagtactggagatcaacacaccaaaggtggaacaggtg ccttttgttgacatcatgttcaatgatttcggcggggctacgcagaagtttggattcgaa gtgggtcctgtctgtttcatcggctaa

DBGET integrated database retrieval system