Salmo salar (Atlantic salmon): 106568841
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Entry
106568841 CDS
T04363
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
sasa04517
IgSF CAM signaling
sasa04520
Adherens junction
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106568841
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106568841
09144 Cellular community - eukaryotes
04520 Adherens junction
106568841
04530 Tight junction
106568841
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106568841
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106568841
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
106568841
NCBI-ProteinID:
XP_013995028
UniProt:
A0A1S3LVM0
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Position
ssa14:complement(18454517..18697827)
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AA seq
1396 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTNSLERKGNGPDTYRSLPRDAGTCANQREFQRETARSSLSANHPMV
DHWLERREQDEEEENNRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPFS
ARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSPV
IMFHVVPNLMKAQYEQLSHSERNPNVAYSGRFSPDSLASERGSTTSGLDHTPQSRGPHPH
HHPEQGDAYTPIPHPHGGSMGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLKKGPE
GLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEEVVA
LLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLRRSVREALSATEPHWLTEKVEEDDL
VLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRL
RVNDQLIAVNGESLIGKTNQEAMETLRTSMSVEGNKRGTIQLIVARRVTKRSELEAPGSP
LGPEQALLNSSLLEDRERRISHSLYGGIEGLDDNLMPQQALMDRMMGNYQLSPTVNMPQD
DTVIIEDDRPPVLPAHLSDQSSSSSHDDMGFHVEVPPTWAKEIPIQNESTLSPDDTDPDG
AFQREGFGRQSMSEKRTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRD
VGPSLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPA
ATEEDDEGMETLEEDTEESSRSGRDSVSTVADLTPLPNTERSLVNGNRTNEDKKKDKGGK
DKKKPDRDKEKDSKNKAKKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRM
KLEQERIQAKTRELRERQARERDYAEILDVNLSRDDEHPYAGIGPLDTSLDSGHSRPQSP
RDNHHQDSSMYTQVGKTRNANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRR
RTYSFEQPWPNNTNTGPSPYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLP
RQPRKNPSSISQDSWDKVYPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQE
LLRQEQRRREQEAKGKQLLLAPPQEHPGNKTYDGYSAHKDPVSPKGPYRQDVPPSPSQLA
RLNKLQGPEKGRPFYS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccatgcggagatggaaat
atcaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttggagcatggagacggaggcattctagac
ctcgatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggtggcgacggcaccagcgccagctccacgggaacccagagc
cccgacctgttcgccaccgagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctacatgtg
cgtcgcagcagtgacccggccctggcaacgatcaatgggccattcagcgacccccgcgtg
accctgccgccggagaaaccgtccaggaagaaccccacccgctggtccaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcaccggcactggcaccaatagcctggagaga
aagggtaatggtccggacacgtaccgtagtcttccccgggatgcaggcacctgcgccaac
cagagagagttccagagagagacggcccgttcctccctgagcgccaaccaccccatggta
gaccactggctggagagacgggagcaggatgaggaggaggagaacaataggatcgagccg
attggccgagctgattcctgtatggaccacacccctctgaggtccctagatgacattgta
aagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttcagt
gcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaaggcg
caggagcagggtctgttccaggagaacgactgcatcgtgcgcattaataatggagacctg
cggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttccccggtc
atcatgttccacgtggttcccaacctgatgaaggcccagtatgagcagctgtcacacagc
gagaggaaccccaacgtggcctactctggacgtttcagccccgactcgctagctagcgag
agaggcagcaccacctcaggcctggaccacaccccacagtcccgtggtccccatccccac
catcacccggagcagggtgacgcctacacccctataccccacccccatgggggctccatg
ggcaagcccccatccggccacgccccctcccctcacagggtgttaaactcaacccccacg
gcgggattcaccaaaaaggttggcaggagactcaacatccagctcaagaaaggtccagag
ggtctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcggcgcccatctac
gtgaagaacatcctgccccgaggcgctgccatccaggacggacgcctcaaagctggagac
aggctgctggaggtgaatggagtggacttggttggtcggacccaggaggaagtggtcgct
ctgctgagggccacgcctatgggaggagctgtggggctggtggtgctacgacaggaggag
accttcctgaatgcagagccccagatgcagagccccagagatttgcgtcgctcggtgagg
gaggccctgtcggccacggagccccactggctgactgagaaggttgaggaggatgacctg
gtgttgacccctgatggtaccagggagttcctgacctttgagatccctctgagtgactcg
gggtcggcagggttaggggtcagcgtcaagggcaaccgctccaaggagaaccacgctgac
ctaggcatcttcgtcaagtccataatcaacggaggagctgcctgcaaggatagacggctg
cgggtcaacgaccagctgatagcggtgaacggggagtcattgataggcaagaccaaccag
gaggccatggagacgctaaggacgtctatgtcggtagagggcaacaaacgcgggacgatt
cagctgattgtggccaggagggtcaccaaacgcagtgagctggaggccccagggagcccc
ctgggaccggagcaggccctcctgaactcctccctgctggaagaccgggagcgtcgtatc
tcccactccctgtacggaggcatagagggcctggacgacaacctgatgccacagcaggct
ctgatggacaggatgatgggtaactaccagctctcccctacggtcaacatgccccaggac
gacactgtcatcatcgaagacgatcggccacctgtacttcctgcccacctctctgaccaa
tcgtcttccagttcccatgacgacatggggttccatgtggaggtccctccaacttgggcc
aaagaaattccaattcagaatgagagcaccctgagccctgatgacaccgacccagacgga
gcctttcagagggagggcttcggcagacagagcatgtcagagaaacggacaaagcagttt
ggagatgccagtcagctggagatcatcaagacacgcaagtccaagagcatggatctagta
gccgacgagattaacctcacccctcgcaaagagaacacaccagggtcttccaccagggac
gtgggtccctccctaggcctcaagaagtccagctctctggagagtttacagaccgccgtt
gccgaggtgacgctcaacggtgacatgcccttccacaggccacgcccacgcataatcagg
gggcgtggctgtaacgagagcttccgggccgctattgacaagtcttacgacaggccagca
gccaccgaggaggacgacgagggcatggagacattggaggaggacacagaggagagctct
cggtccgggcgcgactctgtgtccactgtggcagatctgaccccactgcccaacacagag
agatcgctggtcaacggcaaccgcaccaatgaagacaagaagaaggacaagggagggaaa
gacaaaaagaagccagaccgggacaaagagaaggacagcaagaacaaggctaagaaaggc
atgctgaaaggactgggagacatgttcaggtttggaaaacaccgcaaggacggagagaaa
ctagagcgtaaagggaggctggaggagctgcaggcctcagaagaagagacactgaggatg
aaactagaacaggagaggatccaggctaagacccgggagctgcgggagcgccaggcacgg
gagagggactacgctgagatcttggatgtcaacctgagccgagacgacgagcacccctac
gcaggcatcgggcccctggacacgtccctggacagcgggcacagccggccccagagcccc
cgagacaaccaccaccaagactcctccatgtacacacaagtcggcaaaacccgcaatgca
aatggacgccctccctccgccgacagcaacagactagcgcctagcaaccacgaccggata
cagcggctgaggcacgagttccagcaggccaggggggacgacgaccctgacgaccggaga
cgcacctacagcttcgagcagccctggcccaacaacaccaacacaggcccaagcccgtac
cagacagacggacaacagacaggccgacactctgtgtctgtagaggtgcagagacagaga
cagaggcaggaggagagagacgccttccaacaggcgcagagacagtacagctccctgcca
cggcaacccaggaagaaccccagctccatctctcaggactcctgggacaaggtctacccg
ccgggtgatggcttccagacggccaaggagaaccctcgctactctagctacaagggctcc
agaaacggctacccggggatgagcggcgtgaatgcccgcgtcctcctggaagcccaggag
ctgctgaggcaggagcagagacgcagagagcaggaggccaaagggaagcagctactccta
gcgcccccgcaggagcacccagggaacaaaacctatgacgggtactcggctcacaaggac
cctgtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccagctggcc
aggctcaacaagctgcaggggcccgagaagggaaggcccttctactcctga
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