Salmo salar (Atlantic salmon): 106568873
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Entry
106568873 CDS
T04363
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106568873
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106568873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
106568873
NCBI-ProteinID:
XP_013995106
UniProt:
A0A1S3LW85
LinkDB
All DBs
Position
ssa14:complement(16177280..16257718)
Genome browser
AA seq
3219 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPAVNGMASPHSRYHNNPQQPGGGHHVYPGA
QGDGRGQPFPDGGAVWGPQAGPGQGRPPFQQQQAATQAPSHQQHGPSGPQGHGHQMGPYM
GRADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQ
PPQQHPQPPAQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPG
AVTSSGQYPPYPQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQR
YTGPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMR
GMGTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQTPNPMAPPQRNPTPMGTQQPHPHLQH
HTQHPSHPQQHPHMPPGQQLYPGMPPNQRVPLGQVRPPGPMAHGEPPGPQDQRLLPLQQQ
APRPGQQLQPPPMAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSP
PTPQKVPHIQHSPSDPSSVTTASDRTSASGANLQPAYRDQQPTDTEPKPKKKKKKKANVI
EEKGGEEEKGGEEEKKQKKKKKKKKGVMEEGDEERKPDVGDSCGPEADPLTGALEESPAA
DKKTKKKPKEKEPKEPKPPKAPKMPKTPKEPKEKKARSTTPKAKMPKKHSSTKKVEAAEG
SGSSVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEFRI
SDEDHDGDSPAPKSPSNNSEQQEVVETEGPVVEKIMAMRMGKKEMESGEEMEVEEFYVKF
KSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQAIATFVTEMDDEPFNPDYVEVDRVLDE
SESTDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVAARQPETKRVERPPT
DGWQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEI
YLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQGRV
IKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKV
LLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPN
LLNTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKLLP
KLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSY
EREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDEGS
KFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAEL
DMDAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDRAQ
GYPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGDEN
IKSFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPALPAPPQLPRAEWLASCNP
DLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQPFH
AEVPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGADM
MADGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRGAG
RLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLISMVTDGGGA
YVHEGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVSTFG
VIYDTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPTLI
IDPITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDLLL
GASKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTASEQAAAEKPSH
VKEEQEEEEGGKEVQEEGGKEVQEEGGKEVKEEGDNDLPCTKAEKPDEEEGKDKEMEEEK
AASPKKELKDEKAKEEGEDLKDKEDQELKEKMEVNGDADRETSKEAEPEKDDTPNEDVGD
QDKNPEFQEKPESSKASEDQETRKEKEGSPAKSPNPVAEKGPEEEDEEKMEEDDKSEKSS
QAEVGATSEQKNFDEESNASLSTTARDETRDGFCPEDGEPSAIQRTFFSFWPKDRVMINR
MDNICEAVIKGKWPANRRQFFDIPGLLPGYPGPMASECPLQRRGLAELSMVAAAQTSFSG
SEDLTLSPQVNEDALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQS
QAMDLTKGMHHHKAVSSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPT
RRRRGRRKNVEGLELLFVNNKRGTTEDSEGTKASVEGVQIPPRSYRHNIPSASARVPSVS
AMEDGDAGTPSDKDLRDWLRQHPTYTMDIPTAYTPKSEELLLSSQFPKPKQKRHRCRNPN
KIDINTLTGEERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGF
LPEAMFHRLLTGPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLF
GGMDLTSLQGLQSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGMPNMFGLGG
LFGNNLAAAAASAAATPAAASNGTNDEGDSDETSKRDDGEGGEEGDEDKEKDTGMEAESS
EANRDAAALNAAAAAMAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFP
PTTLADLQSAMAGAMGAASGAQGQEKEPSQAGPAPDRPAAATADPETADDSDSAESLEKT
AESSAPEDEASALAEEADSPQDLAAEDEEEGEDAPEKSD
NT seq
9660 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgacgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagcccaagatgggccacccctacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgccgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctatcccggagcg
cagggtgacgggcgcggccagccattccctgacggaggagccgtgtggggcccccaggct
ggccccgggcaaggaaggcctccattccagcagcaacaggccgcaacccaggccccctcc
caccaacaacatggcccctcagggccccagggccacggccaccagatgggcccctacatg
ggccgggccgactatgcgaccatgcagggccactctggccagacccagacgccccctagg
atcaaccacttcccccaaggtatgggccaggagcccagccactacatgggccacgtgggg
ctccagcagaaccccagcatgacaggtccccccatgcgccacccagcccagcaacagcag
cctccacagcagcacccgcaaccgcctgcccagcagttcctccaccggcccagccaggaa
cctatggcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctg
gccgggaggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggt
gctgtaaccagctcagggcaataccccccctacccccagtacggcaaccttaatcaggga
ttagccggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagt
aacgccatggggcctgcccaggtccagcgctaccccaacgtaggtggacccccacagcgc
tacacgggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagcct
atgcacccttcccagcccatgcacccctcccaggcccaggccaccccccaacagcagccc
cacctccccacaccgcctcagggatcctacggctctcccccctccatgtccccaatgagg
ggcatgggaacccctgggggcacacctccgcctcaacagggtcgcccccctagtgccggc
ctggctccagaggtagggggctacccaggagtcccactccagacccctaaccccatggcc
ccacctcagagaaaccccactcccatgggtactcagcagccacacccccacctgcaacac
cacactcagcacccttcccacccgcagcagcacccccacatgcccccgggccagcagctc
taccccggcatgccccctaaccaacgagtcccactcggccaggtgagacctccaggtccc
atggcccacggtgagcctccaggaccccaggaccagcggctgctccctctccagcaacag
gctcccagacctgggcagcagctgcagcctcctcccatggctttccagcagctgcagcag
gtgcaccccgcccaggctgctttgcccccgtcacaggcccagacgcacctggccggcccc
caccaccagaactctccacccaaccagccaccctgggcgccgccgccacaccagtcgcct
ccaaccccccagaaagtgcctcacattcagcattccccttcagatccatcatccgtgacg
acagcttccgacaggacatccgcctcgggggcgaacctccagccagcctaccgtgaccag
cagcccacggacacagagccgaagccaaaaaagaagaagaagaagaaagccaacgtgatt
gaggagaagggaggagaggaggagaagggaggagaggaggagaagaagcagaagaagaag
aagaagaagaagaaaggagtgatggaggaaggtgacgaggagaggaagccggacgtcggg
gacagctgcgggcctgaggctgaccctctgacaggcgccctggaggaatcgccggcggcg
gataagaagaccaagaagaaaccaaaggagaaggagcctaaagaacccaagccacccaag
gctccgaaaatgcccaagacccccaaagagcccaaggagaagaaggccaggagcaccacc
cctaaggccaagatgcccaagaagcacagcagcactaagaaggtggaggcagcagagggc
agtggcagcagtgtgaaggagaccaagaggaagagagaaccgtcagtgtcggtcaactcc
gatgtggaaaagtcaccccctcctccctctgatgaggaggacgacgacggtgtccagaag
cgtcgctccagtcgtcaggttaagagaaagcgctacaccgaggaactggaattcaggatc
tcggatgaggaccatgatggagactccccggctcccaagtccccctccaacaactctgaa
cagcaggaggtggtggagacggaggggcctgtggtggagaagatcatggccatgcgcatg
gggaagaaagagatggaatcgggagaggaaatggaagtggaagaattctatgtgaagttc
aagagtttctcctacctgcactgtcgctgggcagatctggaggagctggagaaggacaaa
aggatccaccagaaggtcaagcggttcagggccaagcaggctatcgccaccttcgtgaca
gagatggatgacgagcctttcaaccctgactatgttgaggtggaccgggtcctggatgag
tcggagagcacagatgagaacggcgagcctgtcaacctgtacctggtgaagtggtgctcc
ctgccctatgaggacagcacgtgggagctgaaggccgacatcgacctggccaagatcgag
gagtacgaggccgtggcggcccgccagcccgagaccaagcgcgtggagcgacctcccact
gacggctggcagaaatccgagagttccagggattataaaaacgacaacgcactcagggaa
taccagctggagggagtgaactggctgctcttcaactggtacaatacacggaactgcatc
ctagcagatgaaatgggcctgggaaagaccatccagtcaatcacattcctctatgagatc
tacctgaaggggatccacgggcccttcctggtcatcgcccccctctccaccattccaaac
tgggagagggagttccgcacctggaccgaactcaacgtgatcgtctaccatggcagccag
gccagccgcaagaccatccaggcctacgaaatgaactaccgtgacgcgcagggtcgtgtg
ataaagggagcgtacaaatttcatgccgtcatcaccacgtttgagatgatcctgacggac
tgcccggagctgcgcagcgtcccgtggcgctgtgtggtcattgacgaggctcaccgcctc
aaaaacaggaactgcaaactgctcgagggactcaagatgatggacatggagcacaaggtg
ctgctgaccggaacgcccttgcagaacactgtggaggagctcttcagtctgctcaacttc
cttgagcctgaacgcttcccctcagagaacaccttcatgcaggagtttggagacctcaag
actgaggagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcgtcgtctc
aaggaggatgtggagaagaacctggcccccaaggaggagaccatcatcgaggtggagctg
accaacatccagaagaagtactaccgggccatcctggagaagaacttctcctttctgtct
aaaggaggaccgggaggaggtggtggtgcatggggaggcggaggggctcaggtccccaac
ctgctcaacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaacggt
gcagaggagaagatcctggaggacttccgtgagaaccaccacgccgagatggcccagttc
cacctgcaggccatgatccaggcggcaggcaagctggtgctgatcgacaagctgctgccc
aagctgaaggccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggac
atcctggaggactacctcatccagaaacggtacccgtacgagcgtattgatggccgcgtg
aggggtaacctccggcaggctgcgatcgaccgcttctctcgaccggactctgaccgcttt
gtcttcctgctgtgtacccgggccggaggcctgggcatcaacctgactgctgcagacacc
tgcatcatctttgactcggactggaacccccagaatgacttacaggcccaagccagatgc
cacaggattggccagagcaaggcagtgaagatctacagactgatcaccaggaactcctat
gagagggagatgtttgacaaggccagcctcaagctgggccttgacaaagctgtgctgcaa
tccatgagtggccgagagaacgcagccaatggggtgcagcagctgtctaagaaggaagtg
gaggacctcctccgcaaaggagcttacggagctctgatggacgaggaggacgagggctcg
aagttttgtgaggaagacattgaccagatcctccagagacgaacccagaccatcaccatt
gagtccgagggcaaggggtctaccttcgccaaggcgagcttcgtggccgctggaaacagg
acggacatttccctggaggacccggacttctggcagaagtgggccaagaaggcggagctc
gacatggatgccatcaatggacggaacaccctggtgattgacactccgagggtacggaag
cagacacgccactacagctcaatgaaggaggacgagttggcggagttctctgagctggag
agcgacggtgagaacgagaagcccttgaccaaacccaggcggccacaggaccgagcccaa
gggtacccccgcagcgagtgcttcagggtggagaagaacctcctggtttatgggtggggt
cgctggggagacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaagacgtg
gagaccatctgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaac
atcaagagcttcatctgggacctcatcacgcccaccgaggacggacagagccgcacgctc
accaaccactccggtctgtctactccagtaccacggggtcgtaaggggaagaaggggaaa
ccagccctgcctgcccctccccagctccccagggcagagtggctggccagctgtaaccct
gacctgctcctgcaggaggacagctacaagagacacctcaaacaccactgtaataaagtt
ctcctgagggtccgtatgctctactatctgcgacaggaagtcatcggtgaccaagccgac
cggatcctagagggaacagactcaagtgaaatggatatctggatccctcagcctttccac
gccgaggtccctgctgattggtgggacagcgagtcagacaaatcgctcctcatcggcgtc
ttcaaacacggctatgagaagtataactcggtgcgcgccgaccctgcgctgtgtttcttg
gagcgggtgggcatgcctgacgccaaggccatcgctgcagagcagaggggggcggacatg
atggcagatggtccggagggagaggatgaggaccccgagtacaagcctctccgcatgccc
tttaaagatgaaatggatgacttcactaactctccccttgatgacaaagaggaagctatg
gacgttgagagtggtgaatctaaaccaggtgagaatggagcaggcagcagaggggcgggt
cgtctgtactggcctgcagcctcggccctcaccgctagactccgccgcctcatcactgcc
taccagcgcacgcacaaacgagagcagctccgccaggaggccatggcccggcccgacgga
cgccggcgccggcggccccgagaacagctaatctccatggtcacagatggtggaggggcc
tacgtgcatgagggcggagccttcatggcagagggcagtccttatatggccaagggcgga
gcgttcattcccgaggcgacggctctcctggctgaaggaggggccttcttcaaagagagg
cgtcaaaggtggaccaggcgtgaggaagccgacttttaccgcgtggtgtccacgtttggc
gtgatctatgacacggcccgtcagcgctttgactggacacagttcagggccttcgcccgt
ctggacaagaagactgacgagagcctggagaagtactacttctccttcgtggccatgtgc
aaacgggtgtgtcgcatgcaggtcaagaccgacacagagctcccagaccccaccctgatc
attgaccccatcacggaggagcgcgcatcacgcaccctttaccgcatcgagctgctgcgc
cgcatccgcgagcaggtgttgccccaccccctgctgggcgagcgcctgcgcctctgccaa
cccagctctgacctgccggagtggtgggactgtggcaggcacgaccgcgacctcctcctg
ggcgcctccaagcacggcgtgagccgcactgactaccacatcctcaacgacccagccttg
ggcttccttgaggcccacaggaagttcaccaaggggggatcggctggggcgcctcagccg
ccccgcgatggagctccctctactgcctctgagcaggccgctgctgagaaaccctcccat
gtcaaagaggagcaggaggaggaggaaggtggcaaggaggtgcaagaggaaggtggcaag
gaggtgcaagaggaaggtggcaaggaggtgaaagaggaaggtgacaacgaccttccatgt
actaaagctgagaaaccagacgaggaggaaggcaaggacaaagagatggaggaagagaag
gctgcttctcccaagaaggagttaaaggacgagaaagcgaaggaggagggagaggaccta
aaagacaaggaagaccaagaactgaaggagaaaatggaggtcaacggtgatgctgacaga
gagacttccaaggaggccgaacctgagaaagacgacactcccaatgaggacgtcggggac
caggacaagaatccggaattccaggagaaaccggagtcttccaaagcatcagaagaccaa
gaaaccaggaaggagaaagaagggagtccagccaaatctcccaatccagtggctgagaaa
ggccccgaagaggaggatgaggagaagatggaggaagacgacaagtctgagaagtcgtct
caagctgaagttggtgccacctctgagcagaagaactttgacgaggagagcaatgcctca
ctgagcaccacggccagagatgagacccgcgatggtttctgccccgaggatggagaaccc
tcagccatccagagaaccttcttctctttctggccaaaggatcgagtgatgatcaatcgc
atggacaacatctgcgaggcggtcatcaagggcaagtggcccgccaaccgccgtcagttc
ttcgacatcccgggcctgttgcctggataccctggccccatggcgtcagaatgccccctg
cagaggcggggcctggccgagttgtcgatggtggcggctgctcagacgagctttagcggc
agcgaggacctcaccctctcgccacaggttaacgaggatgctctgagcatgtcgttgcca
aagcagcgtcgtcgcaggcggaggaaggtggagattgaggcggagcgcgccgccaagcga
aggaacctgatggatatggtggctcagctcagagagtctcaccaacctgagtcccagagc
caggccatggacctcaccaagggcatgcaccaccacaaggcagtgtcgtccctggcgggc
tactccagcagcagcatggtgccttctgctaccctcaaggctcaaatggagctgctacag
gcagccacgccttccagacatagggccaatggctcattggccgacgctgacctgcccacc
cggaggagacgaggccgcaggaaaaatgtggaagggctggagctgctgtttgttaacaac
aagagaggaaccacggaggattctgaggggaccaaagcgtcggtggagggggtgcagatc
cccccgcgttcctaccgccacaacattcccagcgcctccgcccgcgtcccctctgtcagc
gctatggaggacggggatgctggtaccccctctgacaaggacctgagggactggctcaga
cagcaccccacgtacacaatggacatacctactgcatacacaccaaagagtgaggagttg
ctcctctcctcccagttccccaaacccaagcagaagcggcaccgctgccgaaaccccaac
aagatcgacatcaacactctcaccggagaagagagggttcccgtggtcaaccggagaaac
ggcagaaagatgggtggagccatggcgccgcccatgaaggaactgccccgatggctcctg
gagaacccagagtttgccatcgctcctgactggaccgacattgtcaagcaatcgggcttc
ctccctgaggccatgttccaccgtctcctgacggggcccgtggtgcgcgaagagggcgtc
cgtcgtcgggggagacgccccaaatcggagattgccaaggcgacagcggctgccgcggca
gctcaggcccaggctgcatcgtccgggggcctgaaccctctgctgatgaatggcctgttt
ggaggcatggacctcaccagcctgcagggcctacagagcttccagagtcttcagctacag
ctcatgggcttccccggcatggggggggctgactctaaacacgcctcggccatgctgcct
ctcatgctgcctggtatggctggtatgggcggcatgccaaacatgtttggcctgggaggc
ctgttcggaaataacctagccgccgcagctgcctcggctgcagccacgcccgctgcagcc
tccaacggcaccaatgacgagggcgattcggacgagacgtcgaagagagacgacggggag
ggtggagaagagggggatgaggacaaggagaaggacactgggatggaggcggagtcgagc
gaggcgaacagggacgccgctgctctgaacgcagccgctgcggcaatggccgcctccggc
atgtcggccagctccctggccttcaaccccttcctgctgtccaccatggcccctgggctc
ttttccccctacatgttcctcccccctggcctgggaggtctcactatgcctggcttcccc
cccaccaccctggctgacctgcagagcgccatggctggagccatgggggctgcttctgga
gctcagggccaggagaaggagcccagccaggctggccctgccccggaccgccctgccgcc
gctaccgcagacccagagacagccgacgacagtgactcagcagagagcctggagaagacg
gccgagtcgtcagccccagaagacgaggcctccgcattggctgaggaagccgactcgccg
caagacctagcggccgaggatgaggaggaaggagaggatgcccctgagaagagtgactga
DBGET
integrated database retrieval system
