Salmo salar (Atlantic salmon): 106568959
Help
Entry
106568959 CDS
T04363
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106568959
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106568959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
IRK
Motif
Other DBs
NCBI-GeneID:
106568959
NCBI-ProteinID:
XP_013995322
UniProt:
A0A1S3LWK7
LinkDB
All DBs
Position
ssa14:complement(12557555..12624687)
Genome browser
AA seq
963 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRIGIHACQPQHGDPPPLTSYDIAQRPSRWVCEPAGQPAHLQQNLWAAAGSQPQS
EQPVFQSCHCNFSEEASLSHQRLPLAHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDNYQ
QASNVERCRGGGGGGGHRDQKQVLQQQQHSRLQHRDPSPEATRANSQKGRTINVCESIEA
NRRAFESQTQDPQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELSRNNQAPLLQQHQQD
ALGRPQHCDQDRNKPGRTNQANQPQHPSQPQHHCRDSRVNPPTQPYGGNSSATGSSSKSS
PNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSNPSLSESSGRLPQIAMNTCK
HNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPGKASNESLVRD
GNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKESS
YSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCA
IHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASS
RSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSNF
LGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKH
VHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKL
RSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLDSVTGSLQ
ALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWNSTARRRRSPSTAPHTSS
DSG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaatcaccaccaactgcct
tgtctgagcaagccctctcggataggtatccatgcctgtcagccgcaacacggcgacccc
ccgcctctgacaagctacgacatcgcccagcgaccttcacgctgggtctgtgaacccgcc
gggcagccagcgcacctacagcagaacctttgggccgcagccggctcccagccgcagtcg
gagcagcctgtttttcagagctgccactgcaatttttccgaggaggcgagcctttctcac
cagcgcctgcccctcgctcacccgccgcagccctccccatctttgccgccgtcgtcctct
ctgctgtttttgcaggaatctaatcacggggataatttgcaaagcagtgacaattatcaa
caggcgagcaacgtggaacgctgccggggtggaggaggaggaggagggcaccgagaccag
aagcaggtgttgcagcaacagcagcacagtagactccaacacagggacccctcccctgaa
gcaacccgagcaaactcgcagaaggggcgcactataaatgtatgcgagtcaatcgaggct
aatcggcgagcattcgagtcccagactcaggacccgcagcagctacagcaactcccacaa
ttgcgagctcaacaacagctactggtggggagcagcttccctgtctactactgcgccaac
ggttcaggagagctttctcggaataaccaggcaccactgctgcaacagcatcagcaagac
gcactggggcgtccgcagcactgtgaccaagaccgcaataagccagggaggacgaaccaa
gccaaccagccacagcaccccagccagccgcagcaccattgccgcgactctcgtgtaaac
ccaccaacgcagccgtacggagggaactcgtctgcgactggcagtagcagcaagagcagc
cctaactacggctccagctatcacctgtggcccgagagcccgcataagggagaagagagg
atactcatcgatcatcatcaggcaaccactgagcaaaagaagctgagccatgctggatcc
aacccctccctctccgagagcagcggccgactccctcagatagccatgaacacctgtaag
cacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcggcgcaacctagca
gagctcgactcggaaacacagcccctccagacgctgcacagctctggcctggaggtggtg
gtttccaagggcaacggtgaggaccccggcaaggcgtccaacgagagcctggtcagggac
gggaacggtgctcctgtgaagaagaacaaagacatcggctataggctcggccaccggagg
gcgctctttgagaagcgaaagagactcagtgactacgcactcatcttcgggatgtttggg
attgtcgtcatggtgacggagacggaactgtcctggggagtttacggcaaggaatcttcg
tactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtcttata
ataatgtaccatgcccgggaaatccagctgttcatggtggacaatggggcggacgactgg
aggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctgctggtgtgcgcc
atccaccccatcccaggccattaccgcttcacgtggacggcgcggattgccttcacctac
acgccgtcgacggccaacgccgacgtggacatcatcctctccattcccatgttcctgcgc
ctctacctgatcggccgtgtcatgctgctgcacagcaagctcttcacggacgcctcgtcg
cgcagcatcggcgccctcaacaagatcaacttcaatacgcgcttcgtcatgaagaccctc
atgaccatctgccccggcaccgtgctgcttgtcttcagcatctcctcctggatcattgcc
gcctggacggtgcgcgtctgcgagaggtatcatgacacacaggaagtgaccagtaacttc
ctgggagccatgtggctcatctctattaccttcctctccattggctacggagacatggta
cctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatgggagcgggctgc
actgcgctggtggtcgccgtggtagccaggaagttggagttgaccaaggctgagaagcat
gtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagctgccaat
gtactcagggaaacatggctcatctacaaacacactaagctggtcaagaagatagatcac
gctaaggtgcgcaaacaccagcggaagtttctacaggccatccatcaagctcagaaacta
cgcagtgtaaagatggagcagaggaaactcaacgatcaggccaacacgctagtggacctg
gcgaagacccagaacgtgatgtacgacctggtgtcggagctgcaggagcgcagcgaggag
ctggacaagcgcatcggcatgctggaggacaagctggactcggtgacgggcagcctacag
gcgctgccctgcctcatctcccaagccataacccagcagcagcaggaatttctggacggt
ttcctgcaccgcttccggcctgcctcgctgggctcagagcgctccgaacgctcagagcgc
tcctggaactccaccgcccgccggcgccgctcgccctccacggcgccgcacacctcctct
gacagcggctag
DBGET
integrated database retrieval system
