Salmo salar (Atlantic salmon): 106569075
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Entry
106569075 CDS
T04363
Name
(RefSeq) tenascin-R-like
KO
K06252
tenascin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106569075
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106569075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106569075
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106569075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
DUF4998
Motif
Other DBs
NCBI-GeneID:
106569075
NCBI-ProteinID:
XP_013995519
UniProt:
A0A1S3LXY9
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All DBs
Position
ssa14:22348648..22470658
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AA seq
1380 aa
AA seq
DB search
MVLTPWCFTMAPARGWLLGLALALLLLGSQAAPSLSGEEQKLVRTTRVRRQAPPGGPTSP
LNNQTIKEQPMVFNHVYNINVPLESLCSVDLESAAPPPSQASRGAMSSGGGEDPTEFTEQ
TVDTDSQVTFTHRINIPKQACACPAANTMQQLATRIEMLEREVSLLRVQCSSGNCGCEES
SAMGRLDFIPQCSGHGSFNMDLCGCVCEYGWTGKNCSEPRCPDDCSGQGECMEGECVCDR
DFGGDNCSEPRCPADCSGRGLCIDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQC
RPGYVGEDCSLAYCANNCSQKGICKEGFCACQEGFAGDDCSLVAPDLNLHVRGVTERTID
LEWEGSVLMTDYLVTYVATSPGGVQLEIRVPGNTTTCSIPDLEPGIEYNINVYAVLNNVI
SVPANAQVSTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLP
STITSFHQTGLRPGEEYTVNLVALRDQGRSQPVSAIVTTLIDGPTQLIVRDVSDTVAFVE
WTNPKAKIDQIVLRYGLVGGDGPKTTFRLQPTLSQYSLQVLRPGSRYEVSINGVRKGNES
GTISTEFSTVLLFLSEIDAPKNLQVLSKASTTLELEWDNSEAEVEGYQVVYSTLAGDRYE
KVIVPRNDGPTSRTTLTDLLPGTEYGIGISAMLGTNQSSPATMNARTGLDVPMDLIVTAS
TDNTITLLWGVVQGPIDHYMVTYTSSSGLTMEVTVPKDVTTTTLNDLEPGTEYTITVASQ
RGRQQSTAATIDAFTGFSPVIALYLSDITWDSVTVAWSAPAPPADLYILSYSSEDGTDTS
KVTLDGSKTRSSVEGLLPSTQYTVSLITIQGEVTSEAVTATLTTGMDPPKEMTVSYVTED
SVIISWLRPFAPFDKYKMSYQSARGRVDSIAIDNDVTNYTLSSLHPATEYEINLNAVSGS
QESKSITTSVFTAMDMPMELTALNITPQGALLQWNPPLSSVDNYVLTLTCNQVTADTFLV
EGGKQEHQLTKLLPSTTYSVALYATKGPLTSGTVIANFATPMDAPLNLTASEVNHRSALI
SWQPPIADIDNYMLTYKSADGSRKELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSD
IISTAFTTGNRLFATPQNCAQHLLNGESLSGVYTIYINRDANQGVQVYCDMTTDEGGWIV
FQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKLAAQGRYELRIDMKDGQESVYA
NYDKFAIGDARNLYKLRIGEYNGTAGDALIYHQGRPFSTKDRDNDIAVTNCALSYKGAWW
YKNCHRANLNGKYGESRHSQGINWHNWKGHEFSIPFVEMKMRPFNYRSISGKRRRSTPPE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggttctaacgccgtggtgttttaccatggcgcctgcacgtggctggctgctgggcctg
gctctggctttactccttctggggtcccaggctgctccatccttatccggtgaggagcag
aagctggtccggaccaccagggtcagacgacaggcccctccaggtggccccaccagccca
cttaacaaccagacaatcaaggagcagcccatggtcttcaaccatgtgtacaacatcaat
gttcccctggagtctctgtgctctgtggatcttgaatcagcagcgcctccacccagtcag
gcctccaggggagcaatgtccagtgggggtggggaggaccccacagagttcacagagcag
acagtggacacagacagccaggtcaccttcacccaccgcatcaacatccccaaacaggcc
tgcgcctgtcccgcagccaacaccatgcagcagctggccacccgcatcgagatgctggag
agagaggtgtcgctgctcagagtccagtgcagctctggcaactgtggctgtgaggagagt
tcagccatgggtcgcctggacttcatcccccagtgcagtggccatggcagcttcaacatg
gacctgtgcggctgtgtgtgtgagtacggttggacgggcaagaactgctctgagcctcgc
tgcccagacgactgctccggacagggagagtgtatggagggcgagtgtgtctgtgaccgt
gacttcggaggtgacaactgctcggagccccgctgcccggcggactgctccggtcgaggg
ctgtgcatagacggggaatgtatatgtgaggagaatttcactggagaggactgtacgctt
ggtcgctgcctcaacgactgctctgaccaaggcctgtgcaccaatgggacctgccagtgt
cgcccgggatacgtgggagaagactgctctctggcctactgcgccaacaactgcagtcag
aagggcatctgtaaggagggcttctgtgcctgccaagagggctttgctggagacgactgc
tctttagtggctccggatctgaacctgcatgtgcggggagtgacagagcgtaccattgac
ctggagtgggaggggtcggtgttgatgacagactacctagtcacctacgtggccaccagc
ccaggtggggtccagctggagatcagggtccctgggaacaccactacctgcagtattcca
gacctggagcctggcatcgagtacaacatcaacgtctacgctgtgctcaacaacgtcatc
agtgttcctgccaatgctcaggtgtcaacctatctctcaaatccagacggtttagtcttc
aaatccatcacagagacgtccgtggaggtgcagtggcaaccattctactactcgtttgat
ggctgggaaataagcttcattccaaaggacaatgatggagggatgacagcccagctgccc
agcaccatcacttcattccaccagacaggcctgagaccaggggaggagtacaccgtcaac
ctggtagctctcagggaccagggccgcagccagcccgtatccgccatcgtcaccacattg
attgatgggccgactcagctgatagtgcgcgacgtctcggacacggtggccttcgtggag
tggaccaatcccaaggctaagatcgaccagatagtactgcgttatggcctggtggggggg
gacgggcctaagaccaccttccgtctgcagcccaccctcagccagtactccctgcaggtg
ctgagaccaggctcgcgttacgaggtgtccatcaatggtgttcgcaagggcaatgagagt
ggaaccatctccacagaattcagtaccgttctgttgttcctctcagagatcgacgcaccc
aagaacctgcaggtgctgtccaaggcctccaccaccctggagctggagtgggacaacagc
gaggcggaagtagaggggtaccaggtggtctacagcaccctggcaggggaccggtacgag
aaggtcatcgttccacgcaacgatggtcccaccagcagaaccacactcacagacttgttg
ccaggtacagagtatggcattggtatttcggccatgcttggcaccaaccagagttctcct
gccacaatgaacgccagaactggtctagatgtccccatggacctgattgtgacagcatcc
acagacaacaccatcaccctgctgtggggggtggtccaggggcctatcgaccactacatg
gtcacctacacctcctcatctgggctgaccatggaggttactgtccccaaggacgtgacc
accaccactctcaatgacctggagccaggcacagaatacaccatcactgtagcttcccag
agaggcaggcagcagagcactgcagccaccatcgacgccttcacaggcttcagccctgtc
attgcgctctacttgtctgacatcacgtgggactcggtgacggtggcatggagcgccccg
gccccacccgcagacctctacatcctcagctacagctctgaggacggcactgacacctcc
aaggtcaccctggacggatccaagacccggtcctctgtggagggtctcctgccctccaca
cagtacacagtcagccttatcaccatacagggagaggtgacgtctgaagctgtcacagcc
acgctcaccacaggaatggacccacctaaagagatgactgtgtcatatgtcactgaagac
tctgtcatcatatcatggttgagaccttttgccccctttgacaaatacaagatgtcctac
caatcagcaagagggcgagtggacagcatcgcgattgacaacgatgtgaccaactacacc
ctgtccagcctccacccggcaacagagtatgagatcaacctgaacgccgtgagtggaagc
caggaaagcaagtccatcaccaccagtgtcttcacagcgatggacatgccaatggaactg
acagccctcaacattaccccacaaggagctttattgcagtggaaccctcctctgtccagc
gttgacaactacgtgctcaccctcacctgcaaccaggtgacagccgacaccttcctggtg
gagggtgggaaacaggagcaccagctcactaagctcttgcctagcaccacctactctgta
gccctctatgctaccaagggacccctgaccagtggaacggtcatcgccaactttgcaaca
cccatggacgctcctttgaacctaacggccagcgaggtgaaccaccgcagtgccctcatc
tcctggcaaccgcccatcgcagacatcgacaactacatgcttacatacaaatcagccgat
ggcagcagaaaggagctgatcctggatgcagaagacacgtggatccgtctggagggtctg
gcagagaccacagaatacactgtgaggttgcaggctgccaggggattagagaccagcgat
atcatctctacggccttcacaacaggaaaccgtctgtttgccacccctcagaactgtgcc
cagcatctgctgaacggggagtccctgagcggcgtctacaccatctacatcaacagagac
gccaatcagggagtgcaggtctactgtgatatgaccacagacgaaggaggctggatcgtg
ttccaacgtcgtcagaatggccttaccgacttctccaggaagtggagtgactacagggtc
ggctttgggaacctagaggatgaattctggctcggtttggataacatacagaagcttgca
gctcaaggacgctacgagctccggatcgacatgaaggatggccaggagtctgtctatgcc
aactatgacaagttcgccatcggagatgccaggaatttatacaaactcaggataggagag
tataatggcacagctggggacgcactgatctatcaccaaggccgtcccttctccaccaag
gacagagacaatgacattgctgtgaccaactgtgctctgtcctacaaaggagcctggtgg
tacaaaaactgccatcgggccaacctgaatggaaaatatggcgagtcgagacacagtcag
ggtatcaactggcataactggaagggtcatgagttctctatcccatttgtggagatgaag
atgaggccatttaactaccgcagcatcagtggcaagcgaaggaggtccactcctccagag
taa
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integrated database retrieval system