Salmo salar (Atlantic salmon): 106569243
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Entry
106569243 CDS
T04363
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106569243
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106569243
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
RIFIN
Motif
Other DBs
NCBI-GeneID:
106569243
NCBI-ProteinID:
XP_013995898
UniProt:
A0A1S3LYB1
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Position
ssa14:24303148..24343322
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AA seq
806 aa
AA seq
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MITRNGLLLVFWFLLDKGFLASLHAPPQSRMGREQHLRGVEGLGLRRHVASGVQRVKRGW
VWNQFFVLEEYMGSEPQYVGKLHTDLDRGDSDVKYTLSGEGVGTIFTIDQTTGDIHALMG
LDREVKSYYTLRAQAVDMHTGRPLEPESEFIIKIQDVNDNEPKFLDGPYTASVPEMSPGG
TFVMQVTATDADDPSYGNSARIVYSILHGQPYFSVDSKTGVIRTALPNMDREVKELYQVL
IQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSSVGSAVGKIRAHDL
DSEKNAEVEYSIVPGDEGHMFNITSNGHSQEGIIVLSEHLDYETKRSYTFKVEASNAHLD
PRFLHRGPFKDTATVMVNVLDVDEPPVFTKTSYTIDVYEDTPVSTIIGSVTAQDLDASNS
AVRYSIEWKRPVDGCFDIDTVEGTISTNEMLDRESNRQHNISVVATKVNNPLLSNKVTVT
VNVLDVNEFPPELTILFDTFVCENAKVGQVIQTINATDKDLPTVGQKFFFKSPREIRNRN
FTVRDFGNNTAGIVTKRVGFQRRVQEYYMVPVVVEDSGYPAQSSTGTLTVRVCACETDGS
LLSCTAEAVFLPVGLSTGAVMSILLCMVILLVIVVLYVGLRRQKKRETLMSSKEDIRDNV
IHYDVEGGGEEDTHAFDMGTLRNTKAIKENMLRRGTGSWSDVTTQTEINGSTPTTEGSTD
IIRDYIHQRLQENHLGFSAPPYDSLATYAYEGDGSVAESLSSIESWTVDGREDFRYLGEW
GPSFKTLAGILDKDKADPPTAEVEES
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaggaacggtctgctgttggtcttttggtttctcttggacaaaggtttcctg
gcttccctccacgctccgccccaaagcaggatgggaagagagcaacacctgaggggtgtg
gaaggactgggactgaggagacatgtggcgtcaggggttcagagggtgaagagaggatgg
gtgtggaaccagttctttgtactggaggaatatatgggatcggaaccacaatatgttggg
aagcttcacactgacctggacaggggcgacagcgacgtgaaatacactctatcaggagaa
ggagtcggaaccatcttcaccatagaccagacgacaggtgacatccatgccttgatgggt
ttggaccgagaggtgaagtcttactacacgttacgagcccaggctgtggacatgcacaca
ggcaggcctctggagcctgagtctgaattcatcataaaaattcaagacgtcaatgacaat
gaaccaaagttcttggacggcccatatacagccagtgtcccagagatgtcaccagggggt
acttttgttatgcaggtgactgccacagatgctgacgacccctcctatgggaatagcgca
cggatcgtctacagtatccttcatggacagccttacttttcagtcgactccaaaactggg
gttattagaactgcgttgcctaacatggaccgtgaagtgaaggagctttaccaggtcctt
attcaggcaaaggatatgggcggtcagctgggaggactagccggaaccaccaccatcaac
atcaccctcagcgatgtcaacgacaacccacccaggttttcaaaaagtatattccacctc
cgggtcccagagtcttcgtcagtgggctcagcagtggggaagatcagagctcatgacctg
gactccgagaagaatgcagaggtggaatattctattgttcctggagatgaaggacacatg
tttaacatcacctccaacgggcacagtcaagagggaatcattgtcctcagtgagcatctc
gactacgaaaccaaaagatcgtacacctttaaagtggaggcctccaatgctcacctggac
ccccggttcctgcaccggggtcccttcaaagacactgccaccgtcatggtcaacgtgctg
gatgtggatgaaccccctgtgttcactaagacctcttacaccatagacgtgtatgaggac
actcctgtgagcaccatcattggatctgttacagcgcaggacctagatgcaagtaacagc
gcagttagatactctattgagtggaagaggcctgtggatggctgctttgacattgatact
gtggaagggaccatctccaccaacgagatgttggacagagagagtaataggcagcacaat
atctctgttgtggccactaaagttaacaaccctctcctatccaacaaggtcacagtcaca
gtcaatgtgctggatgtcaacgagttccctccggagctcaccattctctttgacacgttt
gtctgtgaaaatgcaaaagtaggccaggtaattcagaccatcaatgctacagacaaggat
cttcccactgttggacagaagttcttcttcaagtcccccagggaaatcagaaacaggaat
ttcactgtgcgagactttggaaacaacacagcggggatagtgaccaagcgtgtggggttc
cagaggcgggtccaagagtactacatggtgcctgtggtggtagaggacagtggctaccca
gcccagagcagcactggcaccctcactgtccgcgtgtgtgcctgtgagaccgacggttcc
ctcctgtcctgcacggcagaagcagtcttcctaccagtgggtctcagcaccggggcagtg
atgtccattttactgtgtatggtcatactcctggtgatcgtggtgctctacgtaggcctg
agacggcagaagaagagggagacattgatgtcgtccaaggaggacatccgggacaacgtg
atccactatgacgtcgaggggggcggtgaggaggacacccacgccttcgacatgggcacg
ctgaggaacaccaaggccatcaaggagaacatgctccgccggggcacagggtcatggtca
gatgtcaccactcaaactgagatcaatgggtcaacccctaccacagagggcagcactgac
atcatcagggactatattcaccagcgtctccaggagaaccacctgggtttctctgctccc
ccgtatgactcgctggctacatacgcctacgagggggatgggtcagtggcagagtcactg
agctccatcgagtcgtggacggtggatggccgtgaggacttcagatacctcggcgagtgg
gggccgtccttcaaaactctggcggggatattagacaaagacaaagcagatcctcccact
gcggaagtggaggagagctga
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