Salmo salar (Atlantic salmon): 106569440
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Entry
106569440 CDS
T04363
Symbol
acin1
Name
(RefSeq) apoptotic chromatin condensation inducer 1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106569440 (acin1)
09122 Translation
03013 Nucleocytoplasmic transport
106569440 (acin1)
03015 mRNA surveillance pathway
106569440 (acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106569440 (acin1)
03041 Spliceosome [BR:
sasa03041
]
106569440 (acin1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106569440 (acin1)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
EJC/TREX
106569440 (acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
106569440
NCBI-ProteinID:
XP_013996268
UniProt:
A0A1S3LZB4
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Position
ssa14:complement(34740415..34756853)
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AA seq
869 aa
AA seq
DB search
MAATEGGEPKVPSMPQKALRDNQPAESGTPLSLSLATSLSPQSSFKKFRFLRDPIVLSQS
SASRVIKRPRTFSESPHPQSLALQSPSKPGEPEQKGTQQGAQPSAGQAAPKKPARQGVLV
SGADTSGTTGPERETPVMATLGKSPEEEKGKSLVSEEHVQAHREETDKQAVGETTREANA
PSGPAGAVLPPSPQPVEGKAEKGRTRSQKKEEKLGRRSSSSNDSSDSDSGSSSSGSSGSS
SSQGKTHITPSGRRPEKPQTNTISQDTETVSQPEDPTEAPKAPQHKKRVSGEEEEDINID
GARHRKKPFLGIHAGEDNGQKDSEGGEVKTDTTREVNEAAMAEPKKAPESSEECETPKAF
TARRISLSSSKASPGAVSAEGETESGAGRKRRWGSSTAVTAKKSSMSITTDSLKSLIPDI
RLCPGQKMVVDLHPEEDHLSGVEEGGRERGEQDLKIRRTVTQVVPSVTQENGQKESKRSE
HEEEDREDGGEAKGDREEKMDGSFQRDSTETQCHSPPSHDMEMKTVTPSDTLIRRSISQQ
KSGVSITIDDPVRTAKQPSPPRGKVSNIVHLSNLVRPFTLGQLKELLGRTGTVLEDGFWI
DKIKSHCYVTYSSAEESIATRAALHGVKWPQSNPKFLSLDFIQQEELDFHRGLPPPKRAG
EGERGAAAVPGQGAALPEREQWAEREREMEHRERTRAEREWDRDKVRDFGPGKPGEEAVS
RRSCSRERKRKERKMDKKEKAADEPPVKLLDELFNKTKAAPCIYWLPLTEEQFAQKETAR
QERMKEREKRRKEQQEEVEKKREEERKERMKAASAASGERGEGERYRERERDWGRDGESD
KHREDCYRSAGGARRSRSRSDPPPRDRRR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacagagggtggggagcccaaagtgccatccatgccccaaaaagcattaaga
gacaaccagccagctgaatctggtacgcccctgtcactatctctagcaacgtctctgtca
ccccagtcgtccttcaagaagttccgtttcttgagagaccccatagttctatcccaatct
tctgcatccagggtcatcaagaggccccgtacattctctgaaagcccccatcctcagtcc
ttagctctccagtcccccagcaaacctggggaaccagagcagaaaggtactcagcagggg
gcccagccttctgctggacaagcagcaccaaagaagcctgcaagacagggggtccttgtt
tctggagcagacacgtcggggacgacagggccagagagggagaccccagtgatggccaca
ctgggcaagagtcctgaagaagaaaagggtaagagcctggtgtcagaggaacatgtccaa
gcacatagagaggagacagacaaacaggcggtgggagaaacgaccagagaagcaaatgcc
ccctcaggtccagcgggagctgtgctacctccctcaccccaaccagtggaaggcaaggca
gaaaaaggaaggacgagaagtcaaaagaaagaagaaaagctgggaagacggtcttcctcg
tcgaatgactcttcagattctgactctgggtcgtcgtcctcaggttcgtctggttcatca
tcatcccagggcaaaacacacatcactcccagtggtagaaggcctgagaaacctcagaca
aacaccatatcccaggatacggaaacggttagtcaacctgaggatccaactgaggcccca
aaagctccacagcacaaaaagcgagtatctggggaggaggaagaggacataaacattgat
ggagccagacacaggaagaaaccattccttggaatacatgctggagaagacaatgggcag
aaggacagcgagggaggggaggtaaagacagacactacaagggaggtgaatgaggctgcc
atggctgagcctaagaaggctcctgagagcagtgaggagtgtgagacaccaaaggcattc
acagcccgtaggatctcccttagcagcagcaaggcctctccaggagctgtcagtgcagag
ggcgagacagagtctggggctgggaggaagaggcgatggggatccagcactgcagtcaca
gccaagaaatcatccatgagcatcacaacagactctctgaagtctctgatcccagacatc
agactgtgtccaggccagaagatggtggtggatctgcacccagaggaggatcacctctct
ggggtggaggaggggggcagggagcggggtgagcaggacctcaagatcagacgcacagtc
acacaggtggtcccgtcagtgacccaggagaatggacagaaggagtccaagaggagtgaa
catgaggaggaagaccgagaggatggaggggaggctaaaggagacagagaggagaagatg
gatggctcattccagagagactccacggagacacaatgccactctccccccagccatgac
atggagatgaaaacagtgacccccagtgacacattgatccgtcgctccatcagccagcag
aagtctggcgtgtccatcaccatagatgaccctgtccgcacagccaagcagccctctcct
ccacgaggcaaagtgtccaacatcgtccacttgtccaacctggttcgtccgttcaccctg
ggccagctgaaggagctgctcgggaggaccggcaccgtgctcgaggacggtttctggatc
gacaagatcaaatctcactgctacgtcacatactccagtgcagaggagtcaattgccact
cgtgcagcactgcatggggtgaaatggcctcagagcaaccccaagttcctcagtttggac
ttcattcagcaagaggagctggatttccacagaggcctgcctccccctaagagggctggg
gagggtgagcggggggctgcggcggtgcctggtcagggagcggccctgcccgaacgggag
cagtgggcggagcgagagcgtgagatggagcacagggagaggacccgggctgagagggag
tgggacagggacaaggtccgggactttggtccaggaaagcctggagaggaagcggtctcc
agacgatcctgctccagagagaggaaacgcaaggagaggaagatggacaagaaagagaaa
gctgcagacgaacctcctgtcaaactgctggatgaactgtttaataaaaccaaagcagcc
ccttgtatatactggctccccctcacagaagagcagtttgcacagaaggagacagctcga
caagagaggatgaaggagcgagagaagaggaggaaggagcagcaagaggaggtggagaag
aaaagggaggaagagcgcaaagaaaggatgaaagccgcaagtgccgcatctggagaaaga
ggcgagggggagcggtacagagagcgagagagagactggggcagagatggagagagtgac
aaacacagagaagactgctaccgcagtgcagggggggccagacgctcccgtagccgcagt
gaccccccacctcgtgacagacgacgctag
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