Salmo salar (Atlantic salmon): 106569495
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Entry
106569495 CDS
T04363
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106569495
09142 Cell motility
04814 Motor proteins
106569495
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106569495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106569495
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106569495
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106569495
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106569495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_RFWD3
CCD97-like_C
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
106569495
NCBI-ProteinID:
XP_013996366
UniProt:
A0A1S3LZZ2
LinkDB
All DBs
Position
ssa14:complement(37267352..37278774)
Genome browser
AA seq
657 aa
AA seq
DB search
MADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKRGGEGGAAGAPDSSD
LEKKRREAEALLQSMGIAPDITNAQPLRVITEDTCLFHYLVPAPMSPSAKSMCSETGSQD
SGDGNSRTLHWDPDPSTLQLHSDSQLLGRGLRLGMAKVTQVDFPPKQSVSYSKETQTPTC
TQTHTQAKPAEEEEEEEEMSEPKPAEESQEEKADQEEKQEEVPPKDLSEEEKMQLLHSEE
FMTFFDRGSRIVERALSERVDVCFDYSGRDLEDKEGEMQAGTKMSLNRVFSDEHWSKNRV
VTCLDWSPQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKTTPEYTFHCQSAVMSAAFA
RFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISI
STDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACR
HGSKAGISDVFEGHHGPVTGLSCHSAGGPVDFSHLFISASFDWTVKLWTTKSTRPLYSFE
DSCDYVYDVMWSPTHPALFACVDGSGRLDLWNLNNDTEVPSASVCVNGSPALNRVRWAHS
GREIATGDSDGQVLVYDVGEQICVPKADEWTRLVHTLVEINENRDEGEELAAQRLVA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaacaggataagagtgagctgaaggcggagctggagaggaagaaacaacgc
ctggcccaaatcagagaggaaaagaagagaaaggaggaggagaagaacaagaagaaggat
gggtctgactctaagcggggaggggaggggggtgcagctggggcaccagactcgtctgac
ctggagaagaagaggagagaggctgaagctctattgcagagcatggggatcgcccctgat
ataaccaatgcccagcctctgagagtaataacagaggatacgtgtttgtttcactatcta
gtccccgcccctatgtctccctcagccaaatcaatgtgcagcgagacaggaagccaggac
tctggagatggaaactctaggacgttacactgggatcctgacccctctactctgcagctg
cactctgactcccaactactggggcgtggtttgaggcttggcatggcaaaggtgacccag
gtggatttcccacccaaacagtctgtgtcctactccaaggagacacagacccccacctgt
acacaaacacacacacaggccaaaccagcagaggaggaggaagaggaggaggagatgtcc
gagcccaagccagcagaggagtcccaggaggagaaagctgatcaggaggagaagcaggaa
gaagtccctcccaaagatctgagtgaagaggagaagatgcagcttctccactctgaggaa
ttcatgacgttctttgatcgagggagcaggattgtggagcgggctctgtctgaacgagtg
gacgtctgctttgactacagcggccgagacctggaagacaaggagggtgagatgcaggcg
gggactaagatgtctctgaacagggtgttctctgacgaacattggtccaagaacagagtg
gtcacctgtctggactggtctcctcagtaccctgagctgctggtggcctcctacaacaac
aacgaggaggctcctcatgagcctgacggagtggctttggtctggaacatgaagtataag
aagacaacacccgaatacaccttccactgccagtctgcagtgatgtcagcagcgttcgcc
aggttccatcctaacctggtcgtgggcgggacttactcaggccagatcgtcctatgggac
aacaggagcaacaagagaacacctgtacagagaactcctctttctgcatccgctcacacg
cacccagtgtactgtgtgaacgtagtggggacccagaatgctcacaacctcatcagcatc
tcgactgacggaaagatgtgctcctggagcctggacatgctgtctcaaccacaggacagt
ctggagctggtgtttaagcagtcaaaggcagtagcagtgacatccatggcttttcctctg
ggtgacgtcaacaactttgtggtcgggagtgaagatggatcagtctacactgcctgccgc
cacgggagtaaagcaggtatcagtgatgtgtttgagggacatcatggtccggtcactggg
ttgagctgtcacagtgctgggggtcccgtggatttctcccatctgttcatctctgcctcc
ttcgactggaccgtcaagctgtggaccaccaagagtacccgtcctctgtattcatttgag
gacagctgtgactatgtgtatgatgtcatgtggtctcccacacaccccgccctcttcgcc
tgtgtggacggatctggacgcctggacctgtggaacctcaacaacgacacagaggtgccc
agtgccagtgtgtgtgtgaatgggtctcctgctctgaatcgtgtgcgctgggctcactca
gggagagagatcgctacaggagactcagacggacaggtgctggtctatgacgtaggggag
caaatctgtgtgcccaaggcagatgagtggacccgtttggtgcacacgctggtggagatc
aacgagaaccgtgacgaaggagaggagctggccgcgcagcgcctagtcgcctga
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