Salmo salar (Atlantic salmon): 106569543
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Entry
106569543 CDS
T04363
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106569543
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
106569543
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
106569543
NCBI-ProteinID:
XP_013996476
UniProt:
A0A1S3M0C4
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Position
ssa14:complement(38889562..38960881)
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AA seq
1204 aa
AA seq
DB search
MPNVMDKNEVSPGSSAATMKKKAAGGSGCSHISAPKAATSNCTRSKSSNCVDSAPAAAAS
QSAPNVKQPGVASNAVIDEADVGEDESKFQYPRLRRTGGSGSCGGGSIRMKNFTPGGGAA
ATATRKNSTNNETILLQTEGAPAATKPTVASKATDTTTCPGDAAGRCDTNRAAGAEASGA
VVAVEVLNAAAGDACNNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGRAEDAS
LRRGACNSARASMDGSATGSMTQGQGEGSANPGVTPVSTGVPEKKDSRVSFSNAPSRKAS
SSLHGSTQTQATQQPRNSVTFQKPEDGPQIQAEDAEADGSTFMQRQFSAMLQPGVNKFSL
RMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIVIPVGITFFNDGT
TTPWIIFNVISDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKTYLKTWFIVDFVSSIP
VDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDL
ASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSLNKMVNDTWSELYSFAVFK
AMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKY
KQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEDSILEELNEPLREEIVNFNCRKLVA
SMPLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFIQHGVCNVITKGTLGMK
LSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRL
DRIGKKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKLVDLQRPRTMSMTSSVP
GGMFSPAGPSGVGALASLQQAVAMSFCPQGMGPMGGMGMPGMGMGPMGMGMGMGPGPMGP
GPMGPGSASGSGSGTLQSPRMLRRFQVVHSLSQSPVSASPLQSQPPQMAHATGVFGSAIS
SPPVQSPLAHPGRTFQYMGGAGPSGSQLSLVQHHVPSPTHTIQRPSSHKSTHSLHSGTLS
QDARVLSASQLSLPQDGTPPAGPSPPQSTHPSTHASSTSIGPPQPTHPSQPGPSGVGVQV
GGRPAGVPQRVAFASTPPPGGAPGMGAAAAAAGSGLPASGAPKKDSIVSIPELDSARNRL
SSNL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgtcatggacaagaatgaggtttcaccaggctcatctgctgcgaccatgaaa
aagaaggcggcaggcggcagcggatgtagccacatcagcgcgcccaaagctgccacgtcc
aattgcacgagaagcaaaagcagcaattgtgttgactctgccccggctgctgctgccagc
cagagcgccccgaatgtgaagcagcccggcgtggccagtaacgctgtcatagacgaggcg
gacgtcggtgaggacgagtccaagtttcagtatccgcggctgcgccgaaccggggggagc
ggcagttgcggtggtggtagtatcaggatgaagaactttacgccaggagggggagccgcg
gccacggctaccagaaagaactccaccaacaacgagaccatcctactgcaaacagagggt
gcgcctgctgctactaagcccactgtagcatccaaagcgactgataccacaacctgtccg
ggagatgctgccgggcgctgcgataccaacagagcggcaggggcggaggcgtctggagca
gtggtcgcagtagaggttttaaacgcggcagcaggtgatgcttgtaacaacagcaccgct
ccaatttcaagaatgaaatgcaacaaaaacggagaatgcaggagggactccggcaccggg
agcctgcgctcgatcatatccaacaagactgccggggcggggagggccgaggacgcgtcc
cttaggcgcggtgcctgtaactcagccagggccagcatggatggctccgcgacaggctcc
atgacgcagggccagggggaaggtagcgcaaaccccggcgtcacccctgtttccaccggc
gtccccgagaaaaaggactccagggtgtccttctccaacgcgccaagtaggaaagcctcc
tcgtcgctgcacggctcgacccagacccaggcgactcagcagcctagaaactctgtcacc
ttccagaagccggaggatggaccccagatccaggccgaggatgccgaggctgacggaagt
accttcatgcaacgacaattcagtgccatgctgcagcctggagttaacaaattctcctta
cgcatgtatgggagtcaaaaggcggtggagagggagcaagagcgggttaaatcagcgggc
aattggattatccacccctacagtgatttcaggttctactgggatttcacgatgcttctc
ttcatggtgggtaacctgattgtcatcccggtgggcatcaccttcttcaacgatgggacg
accaccccttggatcatcttcaacgtcatctccgacaccttcttcctcatggacctggtc
ctcaacttccgcactggcatcatcatcgaggacaactctgacatcatcctggaccccaag
accatcaagaagacgtacctgaagacctggttcatcgtggactttgtctcctccatcccc
gtggattatatcttcctgatcgtggagaaggggatcgactctgagatgtataagacggcc
agggccctgaggatcgtacgcttcactaagatcctgagtctgctgaggctgctgaggctg
tcccggctcatccgctacatccaccaatgggaagagatcttccatatgacctatgacctg
gccagtgcagtaatgcgtatcttcaacctgattggtatgatgctgctgctgtgtcactgg
gatggctgtctgcaattcctggttcccatgctacaggacttcccccaggactgctgggtc
tccctcaacaagatggtgaatgacacatggtctgagctgtattcatttgcagtgttcaag
gcgatgagccacatgttgtgtatcggctacggtcggcaggccccggagagcctgtctgat
atctggctcaccatgctcagcatgatcgtaggggccacctgctacgctgtgttcataggc
catgccaccgcactcatccagtccctggactcgtcccgacgacagtaccaggagaagtac
aaacaagtggagcagtacatgtccttccacaagctgccatctgacttccgacagaaaatc
catgactattatgagcaccggtaccaggggaagatgtttgatgaagacagcatcctggag
gaactgaacgaaccactcagagaggaaattgtcaatttcaactgccggaagctggtggcg
tccatgccgctgttcgccaacgcagagcccaactttgtgacagccatgctgatcatgctc
cgctttgaggtcttccagcctcgtgattacatcatcagagagggcaccattggcaagaag
atgtactttatccagcacggagtctgtaacgtcatcaccaagggaaccctgggaatgaag
ctctctgatggctcctactttggagagatctgtttgctgacgcggggtcggcgtacggcc
agcgtcagagcggagacgtactgccgtctctactccctgtctgtggacaactttaatgag
gtgctagaggagtaccccatgatgagacgggcctttgagaccgtggccatcgaccgactg
gaccgcataggcaagaagaactccattctgatgcacaaagtgcagcacgacctcaactcc
ggcgttttcaacaaccatgagaatgagatgatccaggagattgttaagtacgatcgtgaa
atggtcaaactggtggacctccagagaccccgcaccatgtccatgacatcctccgtccct
gggggcatgttctcccccgcaggcccatccggggtcggggccctcgccagcctccagcag
gctgtggccatgagcttctgcccccaggggatggggccgatggggggaatggggatgccg
gggatggggatggggccgatgggtatggggatggggatggggccaggtccgatggggcca
ggtccgatggggccagggtcagcgtctgggtcagggtcagggacgctgcagtccccccgc
atgttgcggaggttccaggtggtccatagcctgtcacagagccctgtttccgcatctcct
ctccagtcccagccaccacagatggctcatgcaacaggagtgtttgggtcagctatttcc
agcccaccagtccagagccctctggcgcatccaggacggacattccagtacatgggggga
gcggggccgtctgggtctcagctgtccctggtgcagcaccacgttcccagccccacgcac
accatccagaggccctcctcacacaaaagcacccactcgctccactcaggcaccctgagc
caagacgcccgtgtcctctccgcctcccagctctccctacctcaggatggaacccctcct
gccggccccagccctccccaatctacccacccatccacccacgcctcctccacctccatt
ggcccccctcagcccactcaccccagccagcctgggccctctggagtgggggtccaggtt
ggggggagacctgcgggagttccacagcgggtggccttcgcctccactcctcccccagga
ggagcacccgggatgggggcggctgcagcggcggctgggtcggggctcccggcctctgga
gctcctaagaaggattcgatcgttagcataccggagttagactcagcccggaaccggctg
tcttccaacttgtga
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