Salmo salar (Atlantic salmon): 106569674
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Entry
106569674 CDS
T04363
Symbol
PR38B
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106569674 (PR38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106569674 (PR38B)
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106569674 (PR38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
106569674 (PR38B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
106569674
NCBI-ProteinID:
XP_013996713
UniProt:
A0A1S3M0K6
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All DBs
Position
ssa14:complement(43564838..43573379)
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AA seq
497 aa
AA seq
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MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPVEPVPEEGRA
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKEREGKDGDRRGGDR
ERERGERGEKERDRGGERERRRSRSRERKGERKDREKEREGGGENDRSRRKDRGSDRGRE
RSKDKRSKGETEDRRHKEERDERRGHREERKAKRSSRSGSRERRHKEKSKKREVQEESGS
KSRAEVGEKEKSRKRERSHERGEGEQRSHKRSRSKERSHRPREPSNGKDHGKHRERRRSQ
STERGERTTQSARAESP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtacgt
ggagtcgggactggcggcattgtgtccacggccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgatcactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacactcagcctcctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggtggctgcgtt
atgaccatcggtgagatggtccggtcgttcctcaccaagctggagtggttctccacactc
ttcccacgcatcccggtgcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggttccagagaaggtggaggagccggtagaacctgtgccagaggagggacgggcg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgagctggaaagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacaga
gagagggaaagaggagagaggggggagaaagagagggacaggggaggagaaagggagagg
cgacggtccaggagcagggaacgcaagggagagcggaaagacagggagaaagaaagggag
ggcggcggggagaacgacaggagcaggaggaaagacaggggcagcgacagagggagggag
aggtccaaggacaagaggagcaagggagagactgaggacaggagacacaaagaagagcgg
gatgagaggagggggcacagggaggagaggaaggccaagcgctccagtcggagcggaagc
agggaaaggagacacaaggagaagtccaagaagagagaagtccaagaagagagcggaagc
aagagcagggccgaggtgggggagaaggagaagagcaggaagagagagcgcagccatgag
aggggggagggcgagcagcgctcacacaaacgcagccgcagcaaagagcggagccaccgg
ccacgagagcccagcaatgggaaagaccatgggaaacacagagagcgcaggaggagccag
agcacggagagaggagagaggacgacacagagtgctagggcagagtccccgtag
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