Salmo salar (Atlantic salmon): 106569758
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Entry
106569758 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106569758
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106569758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
zf-Nse
zf-RING_10
Prok-RING_4
SOGA
zf-RING_6
Sina_RING
DUF4200
Apolipoprotein
ALMT
Gp58
Motif
Other DBs
NCBI-GeneID:
106569758
NCBI-ProteinID:
XP_013996821
UniProt:
A0A1S3M1A7
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Position
ssa14:46855472..46862636
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AA seq
463 aa
AA seq
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MASGSSFQEEDLSCPVCCDIFKDPVLVSCGHSFCKTCLRGNWKQRESWECPVCRRKCSKD
WYPPNLSLKSLCEAFSQSHIDSQKSTSKISSVLCSLHGKTLELEDKQPVCLVWQDTRQHN
HKPLDEVVQNHKEELQTALKPLQEKLEVFSKVKLTCNQTAWHIKSQAQDTERQIKEEFQK
LHQFLREEEEASVATLREEEEQKSQMMKEKIKEMNIQISSLSDTIRAIEEEMRSEDISLP
LNYKTTVKRARFTLPDPQLVSGALIDVAKHLGNLQFRVWEKMQGIVKYTPVILDPNTAYR
YFILSEDLTSLRFCVSQQLPDNPERFDYDALVLGSEGFNSGTHSWDVEVGDSTVWSVGVI
QESAQRKGNMKPESWIVYYSGGKYRASPPLGPGIPITMRPKPKRIRVLLDRDRGQLSFSD
PDNNTHMHTFTHTFTEQVFPAVGHVSKVHHLRIVPGKISIKKE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggttcatctttccaagaggaagatctctcctgtcctgtgtgctgtgacatc
ttcaaggatcccgttcttgtgtcgtgtggccacagcttctgtaaaacctgtctgcgggga
aactggaaacaaagggaatcttgggaatgtccagtctgcaggagaaaatgttccaaagat
tggtaccctcctaacctttctctaaagagcctgtgtgaggccttctcacagtcacatata
gatagtcagaaatcaacaagcaagataagctctgtgctctgcagtctgcatggaaaaacg
ctggagctggaggataaacagcctgtctgtttggtgtggcaggatacaagacaacataac
cacaaaccactagatgaagttgtacagaatcataaggaggaactccagactgccctgaag
cccttacaggagaagctggaagtctttagtaaagttaaactaacctgtaatcaaacagct
tggcatattaagagccaggcccaggacacagagaggcagattaaggaagagtttcagaag
cttcaccagtttctacgagaggaggaggaggccagtgtagcgacactgagggaggaagag
gagcagaagagtcagatgatgaaggagaagattaaagagatgaacatacagatatcatca
ctttcagatacaatcagagccatagaggaggagatgagatctgaggacatctcattgccg
ctgaactacaagaccacagtgaaaagagcccgtttcacactgccggatccacagctggtc
tcaggagcgctgatagatgtggccaaacacctgggcaacctgcagttcagagtctgggag
aagatgcaggggattgtgaaatacactcctgtgattctggacccaaatactgcttaccga
tatttcatcctgtctgaggatctgaccagtctaagattctgtgtgagtcagcaacttcct
gacaacccagagaggtttgattacgatgcgttggtcctgggctccgagggctttaactca
gggacacacagctgggacgttgaggttggggacagtacagtctggtccgtgggtgtcata
caagagtctgcccagaggaagggaaacatgaagcctgaaagttggattgtgtactatagt
ggaggtaaatatagagcaagccccccattagggccaggtattcccatcacaatgagacca
aaacccaagaggatcagagtgctgctggacagggacagaggacagctgtcattctctgac
cctgataataacacacacatgcacacattcacacacacctttactgagcaagtctttcca
gccgtaggtcacgtctctaaagttcaccatctgaggatcgtaccagggaagatctctata
aagaaggagtag
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