KEGG   Salmo salar (Atlantic salmon): 106569799
Entry
106569799         CDS       T04363                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    106569799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106569799
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     106569799
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 WDR54 WD_LRWD1 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 106569799
NCBI-ProteinID: XP_013996894
UniProt: A0A1S3M204
LinkDB
Position
ssa14:48955850..48973881
AA seq 681 aa
MAAHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDSYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAQKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDKKVFCTDLRNPDIRVLICEEKAPVLKM
ELDRTADPPPVIWVSTTKSSVNKWCLKGIHNFRASGDYDNDIITPLTPLCTTPEQVIKGG
ASIIQCHILNDKRHIVTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKQVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTHIN
PMDEEENEVNHAAVNGEQETRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETE
SMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVME
HVYEKIINLDTESQTTASSLAANDKPGETEKDEDMALMAEEKIELMCQDQVLDPNMDLRT
VKHFIWKSGGDLTLHYRQKST
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcggcccaccacagacagaatgccgctgggcgaaggaaagtacaggtatcttatgtg
ataagagacgaggtggagaagtacaatcgcaatggggtgaatgctcttcagctggaccct
gcactgaaccggctcttcacggctggaagagactctatcatcaggatatggagtgtcaac
cagcacaagcaggactcttacatcgcttccatggagcaccatacagactgggtcaatgac
atcgtcctctgttgcaatggaaagacattgatatctgcttcatcagacaccacagtgaaa
gtgtggaacgcacagaaaggattctgcatgtcaacgttacggactcacaaggactatgtg
aaggcattggcatatgctaaagacaaggagctggtggcgtcagcagggctagacagacag
atcttcctgtgggatgtcaacacactaacagcactgactgcctccaacaacactgtcacc
acgtcgtccctcagtgggaacaaagactccatctacagcttggctatgaaccagatgggg
acagtcatcgtgtctggctccactgaaaaggtcctgagagtatgggaccctaggacgtgt
gctaagctgatgaagctgaaaggccactccgacaacgtcaagtcactgttgctgaacagg
gacggcacacagtgtctatcaggcagctcagatgggaccatcaggttgtggtctctgggg
cagcagagatgtattgctacgtatcgggtccacgacgagggagtgtgggccctgcaggtg
aacgaagccttcacacacatctactctggaggcagagacaagaaggtcttctgcaccgac
ctgaggaaccctgatatcagagtactcatctgtgaggagaaggcccctgtactgaagatg
gaactggacaggacagctgaccctcctcctgttatctgggtctccaccaccaagtcatct
gttaacaaatggtgtctaaagggaatccacaacttccgggcatctggggattatgacaat
gacatcatcactcccctgaccccactgtgtacaacgcctgaacaggtcatcaaaggaggg
gccagtataattcagtgtcacattctgaatgacaagaggcacatcgtcaccaaagacacc
aacaacaatgttgcattctgggacgtgctgaaagcctgtaagggagaggacctggggaaa
gtagagtttgatgaagaaatcaagaagaggttcaagcaggtctacgtcccaaactggttc
tctgtcgacctcaagacagggatgctgaccatcacgctggatgagagtgactgcttcgct
gcctgggtgtctgctaaggatgctggcttctcaagctccgatggatcagacccaaagttg
aaccttggtggactgctacttcaggccctgctagagttttggcccaggacgcacatcaac
cccatggatgaggaggagaacgaggtcaaccatgcagcagtgaatggggagcaggagacg
cgggtgcagaaggggaatgggtacttccaggtgcctccccacactccagtcatcttcgga
gaggcaggagggaggactctgttccgactgttgtgtagggactcgggtggggagacggag
tctatgttactgaatgagacagtcccacagtgggtcatagacatcaccgtggacaagaac
atgccgaaattcaacaagatcccgttctaccttcaaccccactcttcttctggagccaag
acactgaagaaggaccgtctgtctgccagtgacatgctgcaggtgaggaaggtgatggaa
cacgtctatgagaagatcattaacctggatactgagtcccagaccactgcttcctccttg
gcagccaatgacaagccaggagagacagagaaggatgaggacatggccctcatggccgag
gagaagattgaactcatgtgtcaagaccaggtcctggacccaaacatggacctgcgaact
gtcaagcattttatctggaagagcggaggagacttgacgcttcactataggcagaaatct
acgtga

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