Salmo salar (Atlantic salmon): 106569805 Help Entry 106569805         CDS       T04363                                  Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sasa03021]     106569805 Enzymes [BR:sasa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      106569805     5.6.2.5  RNA 5'-3' helicase      106569805 Transcription machinery [BR:sasa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      106569805 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 SEN1_N AAA_19 AAA_30 AAA_22 ResIII AAA_16 AAA_7 nSTAND3 Rad17 TIP49 HH_CyaD FapA Motif Other DBs NCBI-GeneID:  106569805 NCBI-ProteinID:  XP_013996910 LinkDB All DBs Position ssa01:144167589..144217630 Genome browser AA seq 1975 aa AA seqDB search MMSMCRWCTSLGDDVAKLLQRYCAGSWLTEDEEAVNEEKALNDDLDKCLECVVAYHRAKE ELPGLHRRLWELETSRLLNLFSHAAKDAQPAQDLSYVEEDGREIGVSNISPAVYEDRLGV PLSEVLKYPYLLASPELSEMCVEAICKMEEYNSFRVCSKDPGIYLLLVHPNETVRRWAIG AARSLGKVDRDDFYDLQDIFTCMFYIVELRIPQNFPDMDTSYDPTTKMTLLQPHLYDSKN AKNYWLGICMLLTQLDAQAMDSLFLGPEKQANILLCILNALKDEEPSNEMDPFWPVLQCF MVILDCLGSRFWGQIEPSQAFQAITQSPSYSAELESIRQQTMISRVKTETTYDDDMVTCS QMVYDSNTKVSKGSKRSRGVDSNVVYEDMSSLVNLLHSEVGQALRVHDSTFLWFIPFVKS VMDLDEHSVLYITEVVHYLCGEISTDLPKPQVRICDKVTEFFTLILVHIIELHLGIGRMN MLYYCAPKWVGVLVKCATLPGDAFVHTSEGPVSHSVSSTSSLRVSVPRKASTSRAVPQAC MHIIRSLLKEGTRLNPNSKCHHFLNHLNKHLREGQQRDWKLIRPEIQELQICLKDYVKMM MNRPTISTSPPEPLAIEAGPVAPTTPPLQSSKDPSGPSSLAEFNPPIKREGLWDDVEGST SGGGDSKGVQRGWDIDLALLKKEPLNPDEEFVEPTNDSRPTQDNLTSLRADPEKIQVIKS RLGQLMTKKSKSERARPSVGLSEFGKEKPENLLTSRREEASNLHGISRHPPCLQESMDNV PLSVLKSNLQGKEGSKSSRDRSKGNSRQFDRPQSPPKLTSDVIVISDDEATLDVGRARRT ECFSETSQIKNEPDASDQNPSPCRDYNGDMSESQVFEFETQEDMASAWSNRDSESNMPPE NPKEDSPVSPTTRETLSSWECDTQPIYDEDIQRACQQVEKELEKPKTLPQGLKRATVVKK RNLLVDAKPLASKCLSKKPTVVEKQIKEPVKDAPHAVTPPLRKSSSTVRSKRLEPETHSS LTTSAISHKTSLTPAIVPPKRVRKATEPVSTVEKLGLKKKVRKAFDLSQGSRDSVGDLRH HGATVNVPQAKKPTRQTKRSKVTFPQKRVVKGSNNKLFQFFRQSKQALGAGISAKAEPMK RNPKKIDEIQTPRFVTEEDDEDEDLQCSQLEPARHEQLTVNHSSQRANENKPASSNTVSS VLSNMDRQISPYFQRNDDVTPGPSGQVPKSNGGEDFDADWMYLTQMEPTEMEMCSQMEEE DEFFYTQRDPIDMDIDADSQIPFEEKGGSSDCTWPKQADEGQGAPLAAQTFKKPATPPPS RSSLTKDDDRLFLKPGMSPMSVKKAKPSTTKIYATSSSRSASLVQEMERTANAPFSASSA PAGRGRPARPVVPAQRHCVPQPHLEVGQSLPLNQLLYKPITPQLPPKQPPSRPEQKLPRA PDQPLRPILQSNIGSTLQPSTSKTYTRPDAPFRSQMPNPEVGFRFDTNYLIQHILKWTFD MFSNYKQFGIPSEVCELPLKKVGFSFSSYDEYYKTFYPLLLTNTFEELAGEWLKNKESGK VITQNLKVVANEYSHSVWNVSFTASITASDDSRQMYPREEDLVILWLPQNRGAYSWHEQG FLDPQEQFGYVQRSNVCNGGVGQCPTLNLMIKTLGNVTLANKQAVRCDVVGSLVSTLREF KAICLLNGSSMLKPLLAPQVSYFQPGPEVIPSLNLPDYNLDQVRAVRTGLSVIRNQQLSP KICLIHGPPGTGKSKTIVGLLQKLFSEGVQSMAPPVNRQSKPRRMRVLLCAPSNAAIDNL MKKIILVFKEKCKNIQGNCGDINLVRLGNERTISKNLKPFSLDSQVKNKTQKALMSQDSD IHRRGTQLDESIDKISKMLPKLQKKEEMYHKLAAQKSRLLQERQTLSSQLKQSRSRKQET QAQVLQDAHVVCCTLSTSGSTVLESAFRRLGHKPFSCVIVDEVRIWSSYTLAAFQ NT seq 5928 nt NT seq  +upstreamnt  +downstreamnt atgatgagcatgtgccgttggtgcacgtcattgggtgacgatgttgcaaaactgctccag aggtactgtgctgggtcttggttaacagaggatgaggaggcagtcaacgaggagaaggca ctcaacgatgacctcgataagtgcctggagtgtgtggtagcgtaccatcgggcgaaggag gagttgcctgggctgcaccggaggctatgggagttggagacgtccaggctcctgaacttg ttttctcatgcagcaaaagacgcacagccggctcaggacctcagctatgtagaagaggac ggccgggaaatcggagtgtccaacatcagccccgcagtgtacgaggaccgtcttggagtt cccctgtcagaggtcctcaaatacccctacctactggcatcccctgaattgagtgaaatg tgtgttgaggcaatttgtaagatggaggaatataactccttccgggtgtgttctaaagat ccagggatctacctcctcctcgtccaccccaacgagacggttaggcggtgggcaattggt gctgcaaggtctttagggaaggtggaccgagacgacttttatgaccttcaggacatcttc acctgcatgttctacattgtcgagctgagaatcccccagaacttcccagacatggatacc tcctatgatccgacaactaagatgaccttgctgcaaccgcatctttacgattccaaaaat gccaaaaactactggttgggtatctgtatgcttctgacacagctggatgcccaggctatg gactccctgttcctggggccagaaaaacaggccaacatactgctctgtatccttaatgcc ttgaaggatgaagaaccatccaacgagatggatcccttctggccagtcttgcaatgtttt atggtgatcttggattgtttgggctccaggttttggggtcagattgagccatcccaagcc ttccaggccatcacacaaagccctagctactctgcagagctcgagagcatcagacaacaa accatgatatcacgtgttaaaacggaaactacatatgatgatgacatggtgacctgcagt cagatggtatatgacagtaacaccaaagtgagcaagggaagcaaacgctcacgtggtgtg gatagcaatgtggtctatgaggatatgagttctttggtcaacctcctgcattcagaagtg ggacaggcattgcgtgtgcacgacagcacatttctctggttcatcccctttgtgaaatct gttatggaccttgacgaacacagcgtcctatacattactgaggttgtccactacctatgt ggggagatcagcacagacctcccgaagccccaggttcgcatatgtgacaaggtcacagag ttcttcactcttattctggtccatatcatcgaattgcacctggggattggccgcatgaat atgctctattactgcgctcccaagtgggtgggcgtgttggtgaaatgtgccaccctgcct ggtgacgctttcgtccatacctcggaaggtccagtttctcactcggtgtcttccacatcc tccttgagggtcagtgtgccccgaaaggcctctactagcagggctgttccacaggcatgc atgcatatcatccggtccctgctgaaggaagggaccaggctgaaccccaacagcaagtgc caccacttcctgaaccatctgaacaagcacctcagagaagggcaacagagggattggaag ctgattaggccggagattcaagagcttcagatctgtctgaaggactatgtcaagatgatg atgaacaggccaaccataagtacttctccacctgaaccgctggccattgaggcagggcct gtggcaccaaccacaccaccacttcagtcaagcaaggacccctcgggacctagcagctta gctgaattcaaccctcctataaaacgggaagggttgtgggatgatgtcgaaggcagtaca tctggtggtggggattctaaaggagttcagagggggtgggacatagacctagcgttgctg aaaaaggagcccctaaaccccgacgaggagtttgtcgagccgactaatgattctagacca acccaagacaacttaacttccttgagggcagatccagagaaaatacaggtgatcaaatcc agactcggccagcttatgaccaagaaatccaagtctgagagagcaaggccctctgtaggg ctcagtgaattcggtaaagagaaacctgaaaatctgttgaccagccgtagagaggaggca tccaacctccacggcattagcagacaccctccatgcctccaagaatccatggacaatgtg cccctctctgttttaaaaagtaatcttcaaggaaaagaaggctccaaatcctcacgagat cggagtaaaggaaactcgagacaatttgaccgaccacaatccccaccaaagttaacttca gatgtaattgttatatctgatgatgaggctacattagatgttggtagagcaagaaggact gagtgtttttctgagacctcccaaataaaaaatgaaccagatgcctctgaccagaatcct agtccttgtcgtgattacaatggagacatgagtgaatctcaggtgtttgaatttgaaaca caggaagatatggcctctgcctggtccaatagagattcggaaagtaacatgccacccgaa aatcccaaagaagatagccctgtcagtccaactacaagagagactttatcaagctgggaa tgtgatacacaaccgatctatgacgaggatatccaaagagcctgtcagcaggttgagaag gagcttgagaagcctaagaccctacctcaaggactcaaacgggccactgttgtcaaaaaa agaaatcttcttgttgatgcaaaaccattggcctccaagtgcctgagcaagaaacctacc gtggtcgaaaaacaaatcaaagagcctgtgaaggatgctccccatgcagttacaccacca ttgagaaaaagcagttcaacggtacgttcaaagagactggaacctgagacacactcttcc ttaaccacatcagccatctcacacaaaacgtcattaactccagccattgtccctcctaaa agagtcagaaaagccacagagcctgtgtccacagttgagaagcttggccttaagaagaag gtgcgaaaggcctttgatctctcccagggatcacgtgattctgttggtgatctgaggcac cacggcgctaccgtcaatgtcccacaggccaagaagcctacccgacagaccaagaggtcg aaggtgaccttccctcagaagagagtggtcaaagggagtaacaataagctgttccagttc ttcaggcagagcaagcaggcattgggagccggaatttctgcaaaggcagagccaatgaag agaaatccgaaaaagattgatgaaattcaaactccccgttttgttacagaggaggacgat gaagacgaggacttgcagtgttcccagctcgaacctgcccgtcatgaacagctgacggtc aatcacagctctcaaagagccaatgagaacaaaccagcatcctccaatacagtgagtagt gtgttgtccaacatggacaggcagatctctccatactttcaaaggaatgatgatgtcaca cctggaccttctggtcaagtccccaaaagcaatggaggtgaagattttgatgcagactgg atgtacctcacacaaatggagccaactgaaatggagatgtgctcgcagatggaggaggaa gacgagttcttctacacacagcgggaccctatagacatggacattgacgcagacagccag ataccctttgaggaaaaaggagggtcttcagactgcacatggcctaaacaggcagacgaa gggcaaggggctccacttgccgcacagacttttaagaaaccggctactccgccaccctcg cgctctagcttgactaaggatgatgatcgcttgttcctgaaaccaggaatgtcccctatg tcggttaaaaaggccaagccgtccacgactaagatctacgcaacctcaagctccaggagt gcctccttggtgcaagagatggagaggaccgccaatgctccattttcagcttcttctgcc cctgctggaagaggtaggcctgcccggccagttgtgcctgcacaaagacactgcgtacca caacctcatctagaggttggtcagtctcttcctctgaatcaactcttatacaagcccatc acaccacaactaccaccaaaacaaccaccatccagacctgaacaaaagctcccccgtgca cctgaccagcccctccgcccaatcctgcaaagcaacataggttccaccctccagccctcc acctccaagacctacaccaggcccgacgcccctttccgaagtcagatgcccaacccagag gttggcttcagatttgataccaactacctcattcaacacatcctgaaatggacctttgat atgttcagtaactacaagcagtttggtataccctctgaggtatgtgagttaccgctgaaa aaagtaggcttcagcttcagctcttatgatgaatactacaagaccttttaccccctgctt ctcaccaacacttttgaggagcttgcaggtgaatggctaaagaacaaggaatcagggaag gtgataactcagaatttaaaagttgtcgcaaatgagtacagccacagtgtttggaatgtc agttttacagcgagcattactgccagtgatgactcccgtcagatgtaccctagggaggag gatctggtcattctgtggctgccccagaatagaggtgcttactcatggcatgagcagggc ttcttggatccccaagaacaatttggctatgtgcagagatccaatgtctgcaacggaggc gtgggccagtgcccaactctgaacctgatgataaagaccctgggcaatgtgacgttggcg aacaagcaggcagtgcgctgtgatgtggtgggctccctggtcagcaccttgagggagttc aaggcaatctgtctgctcaatggcagctctatgctcaagcccctcctggccccacaggtc tcctacttccaacctggcccggaggtcatccccagcctcaacctgcctgattacaaccta gaccaggtgagggcggtgagaaccggtttgtccgtcatcaggaaccagcaactatcccca aaaatctgcctgatacacggacccccaggaacgggaaagagcaaaaccatcgtgggcctg ctgcaaaagctgttctctgagggagtacagagcatggctcctccagtgaacaggcaatct aaaccccgccgcatgagggtcctcctgtgtgccccgtcaaacgccgccatcgacaacctg atgaagaagattatcctggtcttcaaggagaagtgcaagaacatccagggtaactgtggg gacatcaatctggtgaggcttgggaacgaaaggaccatctccaagaatttaaaacctttt agcctggacagtcaggtgaaaaacaaaacacaaaaggcactgatgtcacaggactcagac atccaccggcgcggaacgcagctggacgagagcatagacaagatctccaagatgttgccc aaactgcaaaagaaagaggaaatgtaccataagctggcagcgcagaagtccagactgctt caagagagacagacactcagctcccaactcaaacaatctcgcagtaggaagcaggagacc caggcccaggtactgcaggatgcccatgtggtctgctgcaccttgagcaccagcggcagc accgtcctggagtcggcgttccggcgcctgggacacaagccctttagctgcgtcattgtg gacgaggtcagaatttggagctcctatactttggctgcatttcaatag

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