Salmo salar (Atlantic salmon): 106569926
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Entry
106569926 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 16A-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106569926
Membrane trafficking [BR:
sasa04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
106569926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
106569926
NCBI-ProteinID:
XP_013997146
UniProt:
A0A1S3M284
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Position
ssa14:60085473..60115186
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AA seq
1389 aa
AA seq
DB search
MEKVSKTTPDDTGFPNELLESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVF
LLTARVPTKIEQTFNYLDIQGITSNKPTQLLLEYDRGQLSLKLGSVEDVDEVVAHIGSCL
HRICPGLSPAKVMKKLTLKPPERMAVLQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPF
REEVQWDVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSTKDFKLSTDV
CEQILRVVARSSRLEELVLENAGLRSDFAQKLANALTCNPASALHTLNLTNNSLEDKGVS
ALSAQLAKLPMGLKHLNLSKTSISQKGVNSLAQALSANPAVPTTLTHLDLCGNSLRGDDL
SNLYNFLGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLRHLSVLNMSKSVFSHRRSKDVPH
SFKQFFGTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQIL
EGCIAEIPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDN
LVHMIQEEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKA
LQINTKLRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDAL
LKMEQYLLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVIQ
EDMKVAKNLMKDARNSKRLLPNLYHVRGSPGGMGGPIQDKLESMAGEMARVMDGQLQTLL
QSMVDTAEGLCPHVMKRSNLHQELMKGGAGRMTVPHSFITTTLLEQSGVDIINKISEVKL
SMASFLSDRIVDEILESLSRSQNTLAEHLNRKPQPLLHQDPNKMEVLEETVLQPEAQTQE
QSPHHAERLEEMDTCVMTPKSKRKSILCRMLRPVSVAFEMEFDLDKALEEVPIYEEDPPP
PPPLDKKPTYFGELPTMEVQKLEHHTKLRPKPKKRTKPSRAPREPICTSPPPEVEQNDLL
GKVDEGVDEFFYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKS
HGAAAIPTPASATVSTVTEEPLSPKAPLWVHSEISPGHSQKPPTPEPTEEQHSESDSKGS
PHGGRHFGVPVMGPIMGMDLLAEMRKMHEKIVAHKSDSSDKADDKQGKLKGPTSLIDLSS
IAPRSKPTSVTPRPPAPQSIKPHMGPHTLGPLSPRASSSHCPDDSCLGNVSPKGPLPAPR
LKRAPSDYEREEESSHINVELTGDSSTFDLDQEMDRSAIGGKQWSSLKRSTSVVQEVEGR
ERTKSLPASVRPSSMVDLVHCQSPGVFEKDNTEEDFPPTPDMDQRQDLRPDNMEEDTMTT
SQCRKKSYI
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaagcaaaacgaccccagatgatacggggtttcctaacgagttgctggag
agtctgagagatgccgtgggtaggaagatcaagctcaccctgaagaagaggttgaaactg
gaggtcaaaggtgacaaactggagaaccgagtgctggctttggcatcccatcgggtcttt
ctgcttactgcaagggtccccaccaagattgaacagaccttcaattacctagatatacag
gggatcactagtaacaagcccactcagttgttgttggagtatgaccgaggccagctgtcc
ctgaagcttggctctgtggaggatgtggatgaggtggtggcccacattgggagctgtcta
cacagaatctgtccaggtctctccccagcgaaggtgatgaagaagttgaccctgaagcct
cctgagaggatggccgtcctacagtctctatgggaggaccaggccaccacagacctaggg
ccatgtggtggtttctcccacatgtactggtgtctctgtgaccagctgggtctgccattc
agagaggaggtgcagtgggatgtggacacaatctatcagacccaggacaccagagaactg
aacctgcaggattttgtacatcttgataaccgagatttggtggccatcattgtggtcctg
gagtataaccaatggttcaccaagctctccacaaaggacttcaaactgtccacagatgtg
tgtgaacaaattctgcgagttgtggcccgctccagtcgcttagaggagctggttttagag
aatgcaggtctcagaagtgattttgcgcagaagctagccaacgctctgacctgcaaccct
gcctctgcacttcacaccctcaacctcacaaacaactccctggaggacaagggcgtatct
gctctcagtgcacagctggccaaactcccaatgggtctcaagcatctgaacctttcaaag
acctccatatcgcaaaagggggttaacagtcttgcccaggcgctgagtgccaaccctgct
gtccccactaccctcacacacctggacctctgtgggaactcactccgaggagacgacctc
tcaaatctgtacaatttcctgggtcaacataacagtctagtaactctggatctgtccagc
agtgactgctgtctggaccaagtctgcacttcacttctacgaggttctctcaggcacctc
tcagtgctcaacatgtcgaagagcgttttctctcacaggagaagtaaagatgtcccgcat
tccttcaagcagttctttggcactgcgctggcgctgagcagtgtcaacctgtctggaacc
aagctccccctggaggcactcaaagcacttttactaggtcttggctgcaatcctaatctc
agtgaagtatcactggatctcagcagctctgagctaagatctggaggctctcagattctg
gagggctgcatagctgagattcccaacatctccagcctggacatctcagacaacggtttg
gattcagacctgaccactctcttggtgtggctggccaaaaatcgctccatccgccacctc
tcactgggcaagaacttcaataacatcaagtccaaaaatttgtctcaagtcttggacaac
ctggtgcacatgatacaggaggaggaatcgcccctgacgtccctctccctggccgactcc
aagctgaagggagatctgtccatcgtgctgaacgctctgggcagcaacaccagcctgatc
cgggtggacatcagtggcaacggcatgggagacatgggggccaagatgctggccaaggcc
ctacagatcaacaccaagctccggacagttatgtgggacaaaaacaatgtcagcctacaa
ggcctccaggatgtggcagctgctttagaaaagaaccacaccattcgcttcatgcctatc
cccatcatcgatgctgcccaggccctcaaggccagccctgagaaaacagaggacgcccta
ctaaagatggagcagtatctcctaaggaaccacgagactcgaaaatacctccaagagcaa
gcttaccggctccagcaaggcattgtcacgacaaccacacaacagatgatggacatgatc
tgtgtgaaggtgcaggaccacctgaactccctgaggtatacagagaccgacgtcatccag
gaggacatgaaggtggccaagaacctcatgaaggacgccaggaactccaaaagactgctg
cccaatctgtaccatgtgaggggatctcctggtggcatgggcggccccattcaggacaag
ctagagtccatggcaggagagatggccagggtcatggatgggcagctacagacgttgttg
cagtctatggttgacaccgctgagggcctctgtccccatgtgatgaagcggagcaacctg
caccaggagctgatgaagggtggtgcaggcaggatgaccgtcccacatagcttcatcacc
accacactactggaacagtcaggagtcgacatcatcaacaagatcagtgaagtgaagctc
agtatggcgtccttcctctcagaccgtatcgtggatgagatcttggaatctctgtctcgt
tcccaaaacactctggcagaacacctgaacaggaaacctcaacctcttctccaccaagat
cccaacaagatggaggtgctggaggagacggtcctccagcctgaggcccagacccaggag
cagagtcctcaccatgctgagaggctggaggagatggacacctgtgtgatgacacccaag
tccaagaggaagagcattctctgcaggatgctgcggcctgtatctgtggcctttgaaatg
gagtttgacttggacaaggccctggaagaagtgcctatatatgaggaggatccgccccct
cctcccccattggacaagaagccgacgtactttggtgagctgcccactatggaggtccaa
aagctagagcaccacaccaagctccgccccaaaccgaaaaagaggaccaaacctagccga
gcaccacgggaaccaatctgcacctctccaccaccagaagtggagcagaatgacctcctg
gggaaagtggatgagggtgttgatgagttcttctacaagaaaatcaccaaacttagtttt
aaacgacccaccctgaggggctcctccaacatccaggaggggtcggagaagaaacgggaa
tcccggaaaagcggcttccttaacctcatcaagtctcgcacctcgaagtccgagaagagc
catggagcagctgccatccccaccccggcttcagcgaccgtcagcactgtgacagaggaa
cccctgtcccccaaggctccgttgtgggtccactctgaaatctcccctggccactcacaa
aagccgccaacccctgaacccactgaggaacagcactccgagagtgacagtaagggtagt
cctcatggtggccggcactttggggtccccgtaatgggccccataatgggaatggacctc
ctggcggagatgagaaaaatgcatgagaaaatagtcgctcataagtctgactcttcagac
aaggcagatgataaacaaggaaagctaaagggtccaacatcgttgatagacttgtcgtcg
atagcgcccaggtctaaacccaccagtgttacacccagacccccagcaccccagagcatc
aagccccacatgggaccacacactttgggacccctgagccctcgcgccagcagcagccac
tgcccagatgactcctgtctaggaaacgtatccccaaaaggaccactgcccgcccctcgc
ctgaagagagcgccctcagactatgagagggaggaggagagtagccacattaatgttgaa
ctcacaggagactccagcacatttgacttggaccaagagatggacaggtctgctattggt
gggaaacagtggtcctccctgaagcgctccacttctgtggtacaggaagtagaaggtcga
gaacgcaccaagtccctccctgcatctgtgagaccttcatccatggtggaccttgtccac
tgccaaagccctggggtgtttgaaaaagacaacaccgaagaggacttccctcctacccct
gacatggaccaaagacaggatctcaggcctgacaacatggaggaggacaccatgacgaca
tcccagtgtagaaagaaaagctacatctag
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