Salmo salar (Atlantic salmon): 106569962
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Entry
106569962 CDS
T04363
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106569962
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C1-set
Ig_2
I-set
MbhD
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
106569962
NCBI-ProteinID:
XP_013997225
UniProt:
A0A1S3M2G4
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Position
ssa14:complement(59041174..59053860)
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AA seq
437 aa
AA seq
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MTNISTILQSFLAFSYFMHVYGASCPVLECWFVQEKPGGGFHAAMSQEKSLLYINTDPDS
EETRSKQGLSTDHDRVYYVTDPAATLCSSSMHPPEGSVQKPQCEINPFMPQPSTVQWTVP
LTDSAHSPIYLQADWYTAALQGFDGQLRLSNVMRAPMATKEPKVLLSVSSRTFMIRSRLG
EPVVLDCGFWVDASSPLSGSGFAVEWRYQFRGDGRLVLAYDGKTDRFAEIQEEGAGLDFT
ALHETGNASLILQEAEVRHSGTYICTVYLPYLLAQVAVELEIVEPPSLSIFPSPLPLSMP
GQVVTVQCEASGFYPLSLEFHWVLTGPGGRVSPLGQGSVTGHRQGPDSTYSQTSRVELDS
AKLDLGRGGEVTCVAVHRGGTRRASVTLNITGVSAPSIEDYMAMVAVALGIYGLIKVVSW
TFSSGSDVAYTQEKKVK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatatatcaacaatattgcaatcctttcttgcctttagttacttcatgcacgtc
tatggagcaagttgtccagttctggagtgctggtttgtccaggagaaaccaggtgggggc
tttcatgctgctatgagccaggagaagtcactactttacatcaatacagacccagacagt
gaagaaaccagatcaaagcagggactatctacagaccatgatagagtctactacgtcact
gacccagcagctaccctctgcagttcttctatgcacccaccagaaggctcagtccagaag
ccacagtgtgagatcaaccccttcatgccccagccatccaccgtccaatggacagtccca
ctcacggactctgcccacagtccgatctacctgcaagccgactggtacactgctgccttg
cagggctttgacggacagctgcgcctctccaatgtcatgcgggctcccatggcaaccaag
gaacccaaggtgctgctcagtgtgtccagtagaaccttcatgatccgttccagactcggg
gaaccagttgttctagactgtgggttctgggtggatgcctcttctcctctctctggctct
ggcttcgctgtggagtggcgctaccagttcaggggcgatggccgtctggtcctggcttac
gacggcaagacagaccgatttgcagagatccaggaagagggagcggggctagacttcacg
gctctgcacgagacaggaaatgcatcactgatcctgcaggaagctgaagtgcgccactca
ggaacctacatctgcacggtgtacttgccctatctcctggctcaggtggcagtggagctg
gagatagtagagcctccttccctctccatcttcccctccccgctccctctctccatgccc
ggccaggtggtgacggtgcagtgcgaggcgtcaggattctaccccctctccctggagttc
cactgggtgttaacagggccgggcggtagggtcagccccctgggtcagggcagtgtgacg
ggccacagacagggcccagacagcacctacagccagaccagccgtgtggagttggactca
gccaagctagacctgggccgcggcggggaggtcacctgtgtggccgtccaccgtggaggc
acccggcgggccagcgtcaccctcaatatcactggtgtcagtgctccctccattgaggac
tatatggcgatggttgctgtggccctggggatctatggtttgatcaaggtcgtctcctgg
acttttagctctgggtccgatgttgcttacacacaagagaagaaagtgaagtaa
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