Salmo salar (Atlantic salmon): 106570003
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Entry
106570003 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106570003
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106570003
04082 Neuroactive ligand signaling
106570003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106570003
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106570003
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
106570003
NCBI-ProteinID:
XP_013997321
UniProt:
A0A1S3M2Q1
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All DBs
Position
ssa14:57762200..57819826
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AA seq
1961 aa
AA seq
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MYCGRRDEGRRECRAPEKQSLFACELPPPLRPPNCAPPPPSPMAAKPALSLLLAVLACTG
PARSSPPLLLRPRERERDLGVVNIAVVHSGSSLLPETASAGGTGATGGPGGPQGRGASSS
LATVSASAPLASASAALVGDSVMTQYGPANVIYLTVNESSPASLLLQLCELLATTPLQGL
VFEEERPPPHNQAPLAPMMEFVSAQTGVPVVAVGGGAGLGREPQESGSIYLQFTCSTAMQ
LDVIFEVLEEFDWTSFSVVATRHHGYEDFLAMVEGLTDGSFIGWEKKGVVMLNVTDDPGG
TRTRRLLKENEAQVRLLYCSQEEAALIFKAAWASGQAGHSHMWFAVGPALSGLGLEGLPK
ALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRKEYGWARGPHYFAGNCQTDGNQTQRVP
DRIRFFSNITLSGRDYSFNSDGYLSNPVLDVISYSEGKGWEEVGTWQNGVLDLIIQPFSR
YGSFLKPLDDTQHLKVVTLEERPFVIVEPADPGTNSCIRDSVPCRLPLNTTNVPVDEKSS
KHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRHGKRGSDGQWNGMVGEVVYKRADMAIGS
LTVNKERSEAVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAV
TVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMV
LVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTE
ENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIG
SGKVFATTGYGIALHKNTRWKRPVDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSK
LDIDNMAGVFYMLLVAMGLSLLVFSWEHLVYWKIRQCLGHSGGMDFLLALSRGMYSCCKF
KDETISGGLKNTLPLYHSVPTMPPPPQSHISAAVTCNTTLAMVQQQQMHQQQQQPQAYSM
LPAASPPTTGHSAMAIGPSNSPLMEGPMPCSTFLPRHDRRLAVVDRWNRPKPSTDKPIGG
SGGIPDMAQFQQGLPPHWAGGAGGGDGGLDEYKRYYGPIDPEGLGANADPQTGGSQTPKM
NQRGTKSSGMPRLPSKGPPPWHFMSKHPLPLPSPPHRPLFWRRGSLPKRKGSGGPLYENI
LPLGRRGGGRYGARDGGGRRSRRPPPLPLPVPVSSPAHTTPTTPSHSALYTSSSCSSTSS
SSSSSSSSVSLSRSNSPSSSNTSYTSSQSFKYRAGSRDVEDIYDSDELTEESSLLLVRRK
GKSRRMSSRSLPCSPPPPPVPPRKPRLQYERERAGSQLAQLQEWWASWGERERRRGTGTR
AEGKEEKRHHKESERERKRRKKGRKKKKREEKERERERKRRKVKKKRKKEEKVKRRDRGK
RSEHEGDGEQRGHLKAITQEAYSSYPAPRRDSMRKKSESSIRSYGWDIPRDEERREREDK
ERDDGDDTRGKERNRSPHSRHRHADRPSSSSKQYQSSSKPSTSVKFWGAGNPSSETPSSA
FLPLIPFSSRRRSKGSDREALGKEGEKRPLLGMNERVEVHSKEGLSFHEWDSEDEDDDSK
EQRRKVEQETRHERRRRTASESERERDKVVGIYSDDDGSSGEFGKFERYWDGHEGRAVGG
IGGGGWFFGTYPAREKAGSINSRDDSLLRHGEGWGGAGVAGEGGWGSGGAWGSRRIGGTQ
WPPPPLTPPAPRRYWSVDKLPVKEEKKGKRKDKGRGDVACNCQSALEHQHAHSKWAKVSS
RSQEELFLHCQRFGSSSNSKRHSSKPDRTQNQPKSGSQSNLSIQRTQRTDRIRQSSTSQA
LIPSLPPPTLPALPAPSSASHPIHVPLPTSSSSVSSPSVVSSIPGAPQPSSMASASAKLL
YQRLRSVPQPQRLQSPHLPLKSKSLCSRRGSAHFSSVESQV
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtggacggagagacgaggggagaagagagtgtcgggctcctgaaaaacagtcc
ctcttcgcctgtgaactgccgccaccactccgcccaccaaactgcgccccccctcctccc
tcccccatggcggccaagcctgccctctccctcctgttggccgtgctggcctgcacgggg
cccgcccgctcctcccctcccctcctgctccgcccccgggagagagagagggacttgggc
gtagtcaacatcgctgtggtccactcgggctcctccctgctcccggagacggcctctgct
gggggaacgggcgcaacgggcgggccgggggggcctcagggaaggggggcctcgtcgtca
ttggctacggtgtcggcgtccgcgccgctggcgtctgcatcggctgctctggtgggcgac
agcgtgatgacgcagtatggcccggccaacgtgatctacctgacagtgaacgagagcagc
ccggcgagccttcttctgcagctgtgtgagctgctggccaccacgccgctccagggcctg
gtgttcgaggaggagaggcccccgccacacaaccaggctcccctggcccccatgatggag
tttgtctcagcccagaccggagtgcccgttgtggccgtgggaggaggggccggtctgggc
agggagccacaggagagcggctccatctacctccagttcacctgctccacagccatgcag
ctggacgtgatcttcgaggtgctggaggagttcgactggacctccttttccgtggtggct
acgcgtcaccacggctacgaggacttcctggccatggtggagggcctgacggacggatcc
ttcatcggctgggagaagaagggagtggtcatgctcaacgtcaccgacgacccgggaggg
acgcgcacacgcaggctgctcaaggagaacgaggcgcaggtgcgtctcctctactgctcc
caggaggaggccgcactgatcttcaaggcggcctgggcctcgggtcaggccggacactcc
cacatgtggttcgccgtggggccagccctgtccggccttggcctggagggcctccccaag
gccctgttcgcagtgcggccgcagggctggagggacgagccccgcaggaggatcgccaaa
ggggtgtctgtgctgacccacggagccatggctttgaggaaggagtacggctgggctcga
gggccacactacttcgcaggcaactgccagacagatggcaaccagacgcagagggtgcca
gacaggatcaggtttttcagtaacattacgctgagtggccgggactactcgttcaacagc
gatggctacctgtctaatccagtgctggacgtgatttcctactccgaggggaaaggctgg
gaggaggttggcacgtggcagaacggtgttctggatctcattatccagcccttttcacgc
tacggctccttcctcaagccgctggatgacacccagcacctcaaggttgtcaccctggag
gagaggccctttgtcattgtggagccagccgacccaggcaccaactcctgcatccgggac
tcggtgccctgcagactaccactcaacaccaccaatgtgccggtggatgagaaatcatcg
aagcactgctgcaaaggcttctgcattgacgtcctcaagcgattggccaaaatagtgggc
ttctcctatgacctctacctggtgaccaatggcagacacgggaagagggggagtgatggg
cagtggaatggcatggtcggggaggtggtttataaacgggccgacatggccattggctcc
ctgaccgtcaacaaggagaggtcagaggctgtggagttctccgtgcccttcgtggagacg
ggtatcagcgtcatggtctcccgtagcaacggcaccgtctcgccgtcggccttccttgag
ccgtacagcccagctgtgtgggtgatgatgttcgtcatgtgcctgtccgtggtcgccgtc
accgtctttattttcgagttcttcagccctgttggctacaaccgcagcctgcaaagtgca
aagaagacagggggctctaaattcaccatagggaagtctatctggctgctgtgggctctg
gtcttcaataactcagtgcccgtggagaaccccagaggaaccactagtaagatcatggtg
ctggtgtgggccttcttcgctgtcatcttcctggcctcctacacggccaaccttgcagcc
ttcatgatccaggaggagtacatcgacactgtgtctggtctcagcgacaagaagttccag
cagcccactgagcagtaccccccgctacgatttggcaccgtccccaacgggagcacagag
gagaacatccgcagcaactacgccaacatgcacaacttcatgatccgcaacaaccagaag
ggtgtggaggaggccatcgacaacctcaagactggcaaactagatgccttcatctatgat
gcggctgtgctaaactacatggcgcggaaggacgagggctgtaaggtgatgaccattggc
tcgggcaaggtgttcgccaccacgggttacggcattgccctgcataagaacacccgctgg
aaacgccctgtggacttggccctactgcagctggtgggagacgatgagatcgacatgctt
gagcgcctgtggctctctgggatctgtcacaacgacaagattgaggtgatgagctccaag
ttggacatcgacaacatggcgggcgtcttctacatgctgctggtggccatggggctcagt
ctgctggtgttctcctgggagcacctggtgtactggaagatcaggcaatgcctgggccac
tccgggggcatggacttccttctggccctcagcaggggtatgtacagttgctgcaagttt
aaagatgaaaccatctctggaggcctaaaaaatacacttcccctatatcatagtgttccc
acaatgccgcctccaccccaatcccacatctccgcggctgtaacctgtaacactaccctt
gctatggtgcagcagcagcagatgcatcagcagcagcaacaaccgcaagcatacagcatg
cttcctgctgcatctcctccaactactgggcactctgcaatggccattgggccatcaaac
agtccccttatggagggtcctatgccgtgctccacttttctgcctcgtcatgaccgcaga
ttggctgttgtagaccgctggaaccgtcccaagcccagcacggacaaacctattggtggc
agcggtgggatcccagacatggcacagtttcaacagggcttgccccctcattgggctggg
ggagccggtggaggggacgggggcctggatgaatacaagcgatactatggcccgatcgat
ccagagggcttaggggcaaatgctgacccacaaacaggtggctctcagacccccaaaatg
aaccagaggggaacaaagtcctcaggaatgccacggctaccttctaaaggaccgccccct
tggcacttcatgtccaagcaccctctaccgctcccctcacccccacatcggccgctattt
tggagaagaggcagcctccctaaaagaaagggctccggggggcctctgtatgagaacatc
ctccccctggggagaagagggggagggcggtacggcgcaagggatggaggtggcaggcga
agccgtcgccctcccccactccctttgcctgtccctgtctcgtcccctgcccacactacc
cctaccactccctctcactccgccctctacacctcgagttcctgctcctccacctcatcc
agttcatcttcgtcctcatcctccgtctccctctcacgctccaactcaccctcatcctcc
aacacctcatacacatcgtcccagagttttaagtacagggctggcagtagagatgtcgag
gacatctatgactctgatgagctgacagaggagtctagcctcctgctagtacggagaaag
ggcaaatcccgacgcatgtcctctcgctcactgccttgcagtccaccccctccgcctgtg
ccaccccgcaagcctcgtctacagtatgagagagagagggcagggagccagctagcccag
ctgcaggagtggtgggcctcctggggcgagagagaaagacgtagaggaacaggaaccagg
gctgaggggaaggaggagaaacggcatcacaaagagagcgaaagggagagaaagaggagg
aagaaagggcggaagaaaaaaaagagagaggagaaggagagagaacgggagcgcaagcgg
cgtaaagtgaagaagaagaggaagaaagaggagaaggtgaagagaagagaccggggcaag
cgatcagagcacgagggagatggtgagcagagagggcacctcaaagcgataacgcaagag
gcctactcttcctaccctgctccgaggcgtgactccatgcggaaaaagagtgaaagttct
atcagaagttacggatgggatattccaagggatgaagagaggagagagagagaggataag
gaaagagatgatggagacgacactagaggcaaggaaaggaacagaagtcctcactctcgc
cacaggcatgcagataggccttcaagttccagcaagcagtaccagagctccagtaaaccc
tcaacctctgtcaaattctggggagcgggaaacccatcctcagagactccttcatctgca
tttctaccactgatccctttctcatccaggcgcaggagtaagggttcagatagagaggcc
ctaggaaaagaaggggagaagcgccccttgttgggcatgaacgaaagagtagaggttcac
tccaaagaaggtctgtcgtttcatgagtgggattccgaagatgaggatgacgattccaag
gagcaaaggagaaaagtggagcaagagacgagacacgaaagaagaagaaggaccgcatca
gagtccgaaagggaacgcgataaggttgtgggcatctattccgacgacgacggctcctcg
ggagaattcggaaagttcgaaaggtactgggatggtcatgagggtagggcagttgggggc
ataggagggggaggttggtttttcggcacttatcccgccagagaaaaagctggcagcata
aacagtagggatgactcgttactgaggcatggggagggatgggggggagcaggtgtagca
ggggaaggtggctggggatcaggtggagcctggggttcaaggaggataggtggtacacag
tggcctccacctccattgacaccaccagctcctcgaagatactggtccgtggacaagctt
cccgtgaaggaggagaagaaagggaaaaggaaggacaaagggcgcggtgatgtggcttgc
aactgccaatctgccctcgagcatcaacacgctcactctaaatgggccaaggtgagctct
cgtagccaggaggagctatttctacactgtcaacgtttcgggagcagctccaattccaaa
cggcattcctccaaacccgatcggacccagaatcaacccaaatcgggaagccagtccaac
ctcagcatccagcgaacacagcggacggaccgcattcggcagtcctctacatcgcaagcc
ctcatcccttccctccctccaccaacactcccagcccttcctgccccttcttctgcatcc
catcccatccacgttcctcttcccacctcatcctcttcggtctcatctccctctgtagta
tcctccatcccaggcgccccccagccgtcttctatggcttctgctagtgccaaactcctg
taccagagactgcgctcagtgccccagccccaaaggttacagtcacctcacctgcccctc
aagtccaagagcctctgctcacggagggggtccgcacacttctccagtgtggagagtcag
gtgtga
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