Salmo salar (Atlantic salmon): 106570056 Help Entry 106570056         CDS       T04363                                  Name (RefSeq) helicase SKI2W-like   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa03018   RNA degradation Brite KEGG Orthology (KO) [BR:sasa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     106570056  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sasa03019]     106570056 Enzymes [BR:sasa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      106570056 Messenger RNA biogenesis [BR:sasa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      106570056   mRNA degradation factors    3'-5' decay     Ski complex      106570056 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk HTH_23 Motif Other DBs NCBI-GeneID:  106570056 NCBI-ProteinID:  XP_013997472 UniProt:  A0A1S3M2K9 LinkDB All DBs Position ssa14:complement(54830295..54866177) Genome browser AA seq 1250 aa AA seqDB search MERIDLPAVGPTDLPISLLEMGCSGRFELITHPQPNDQPLPPQSSLPHGLPPTSVSLETE VEKRFLRDPAWLPIHDTDAAFHRFLKLAERDVHIDSLLHCALSPLHSGISVVRDPTTGML LDFTEVLLGDTGISAKNSMSLQRPPNPNPSESLRGSNTNYPFMPGGMEELTLEQIKKKSE LEEDIDFENGLLTVPPGLKVGMDFSDKDAKTTKGEINLLSLLSTFDDIIDSQPEAEEKEK GHGSGNAPKLPRTNSLEDLGIKDSPSTPGTTSTEKKDGGTTKPAEGQEEKKRWAIPININ TPCGDFYKRIPNPAFKYPFELDVFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQ KHMTRTIYTSPIKALSNQKFRDFKTTFGDVGLLTGDVQLSPEASCLIMTTEILRSMLYNG SEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNAVEFSEWIGRI KKKHIYVISTAKRPVPLEHYLYTGNSTKTQKEMFLLLDPSGNLQTKGYYAAIDAKKERTS KHAQSFGTKNPSQNTTPNQDRAVWLSLLHFLSQRQQTPVVAFTFSRTRCDDNARSLASMD LTSSAEKSEIHSFFQKSLRRLRGGDRQLPQILFMRDLLKRGIGVHHSGILPIMKEVIEML FSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLD ATGTVIILCKSGVHDMGDLNVMMLGKPTVLQSQFRLTYTMILNLLRVEALRVTDMMRRSF SESHRDTQAYEQQIGQLKQTLSSLPPLDTEGQLSDLLSYYYTVTELRITAEALQCAVLGS VNGLKALSVGRVVVVNNKQHFNALGVVLQVSSDSVNRTFTALIICEKGNEEGRGDSPNGS AFPHLYNTALFTPEGPCSHTVQKLKLQDISAITVKTLKVIPDRIIDNYNKRQQLRFRLDP PGQAISTATQELLRLVEANPGGVMTLDPVNDFQLKSVDVVEGTMRLRVLQDSLKDFSCIH SPTFSEQFLRVQERMSVQEELDKLLFLISDQSLSLLPEYHQRIKVLQSLQYVDSSGAVQL KGRVACQISSHELLLTELLFENALSPLAPEESAALLSCLVFQQKTQVEPHITNTLKEGIE RVLAVAQRIGELQRDCGITQTVEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTV VRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH NT seq 3753 nt NT seq  +upstreamnt  +downstreamnt atggaaagaatagatctgcccgctgtgggccccacagacctccctatatccctgctggag atgggttgctctggcaggtttgagctcatcacacatccacagcccaatgaccagcccctg cctccacaaagttcgctccctcatggactccctcccactagtgtgagcctggagacagag gtagagaagcgctttctacgcgaccctgcctggcttcccatacacgataccgacgctgcc ttccacaggtttctgaagctggctgagagagatgttcatatagactctcttctccattgt gctctgtctcctctgcactctggcatctcagtagtcagagatccaacaacaggaatgttg ttggacttcactgaggtgttactgggggacacaggcatctctgctaagaattctatgtcc ctgcaacgtccaccaaaccctaatccctctgagagcctacgaggaagcaacaccaactac ccgtttatgcccggtggtatggaggagctgacactggaacaaatcaagaagaaatccgag ctggaggaggacatagactttgagaacgggttactcacagtgccccctggactgaaagtt gggatggacttcagtgacaaagatgccaaaaccacaaagggagaaatcaatctcctgtcc ctgctgtccacctttgatgacatcatagactcccagcctgaggcagaggagaaggagaaa ggccacggaagtggaaacgcacccaaactgcccagaaccaacagcctggaagacctgggg atcaaggactctccctctacacctgggaccacctctacagagaagaaagatggaggaacg accaaaccagcagagggccaggaggagaagaagagatgggcaatcccaataaacatcaac accccctgcggtgacttctacaaacgtatccctaaccctgccttcaagtatccctttgag ttggacgtgttccagaagcaggcagtgttgaggctggaggcccatgactctgtgtttgtg gcagctcacacatcagcaggcaaaaccgtggtggcagaatacgccatagcactctcacag aagcacatgaccaggaccatctacacctcccccatcaaggcgctgtccaatcagaagttc cgggacttcaagaccacctttggggacgtggggcttctgaccggtgacgtacagctgagt cctgaagcctcctgtcttatcatgaccactgagatattgaggtccatgctctataacggt tcggaggtcatcagagatttagagtgggtgatctttgatgaggttcactacatcaatgat gctgagagaggagtggtgtgggaggaggttctgatcatgttacccgaccacgtcagcatt attcttctgagtgctactgtccccaacgctgtggagttcagtgagtggatcgggcgcatt aaaaagaagcacatctatgtgatcagcacagcgaagagacctgtgcctctggagcactac ctgtacacaggcaacagcaccaagacccagaaggagatgttcctactgctggacccttcg ggcaacttgcaaaccaaagggtactatgctgctatagatgccaaaaaggaacgcaccagt aaacacgcacagtcctttggcacgaaaaatccatctcagaacactacacccaaccaggac cgggcggtgtggctttccctcctccacttcctgtcccagcgccagcagacccccgtggtg gcgttcaccttctccaggacgcgctgcgacgacaacgcccgctctctagcctccatggac ctcacaagctcggcggagaagagcgagatccactcctttttccagaagagcctgagacgc ctcaggggaggggaccgccagctgccccagatcctgtttatgagggacctactgaagagg ggtatcggtgtgcatcacagtggcatcctgccaatcatgaaggaggtcattgagatgctg ttctcgcggggactagtaaaggttctgtttgccactgagacatttgctatgggagtgaac atgcctgcgaggacagtggtgtttgacagcatacggaaacacgatggcaccggcttcaga aacctgctgcctggtgagtatatccagatggctggtagagcaggtaggagaggtctggac gccacaggcactgtcatcatcctctgcaagtcaggggtacatgacatgggggacctaaat gtcatgatgctggggaagcccacagtgctgcagtcccagttcaggctgacctacaccatg atcctcaacctgctgcgtgtggaggccctccgagtcaccgacatgatgaggaggagcttc tctgagagccacagagacacacaggcctatgagcagcagattggtcagttgaaacagact ctgtcctctctccctcctctggacacagagggtcagctgtctgacctactgtcatactac tacactgtcactgagctacgcatcaccgctgaggcgctgcagtgtgctgttctggggtct gtgaatgggttgaaagctctctccgtgggacgagtggtagtggtcaacaacaaacagcac ttcaacgccctcggagtcgtcctacaggtttccagtgactcagtgaatcgtacgtttact gctctcatcatctgtgagaaaggcaatgaggagggaagaggggacagccccaacggcagt gccttcccccacctctacaacactgccctctttacacctgaaggtccctgcagtcacacg gtccagaagctgaagctacaggacatctcagccatcacagtcaagaccctgaaggtgatc cctgaccgaatcatcgacaactacaacaagaggcagcagcttcgcttcaggcttgatcct ccgggtcaagccatctccacggcaacccaggaactcctgcgattggtggaggccaaccca ggcggggtgatgacccttgacccagtgaacgacttccagctgaagagtgtggatgtggtg gagggcaccatgaggctgcgtgtgctgcaggacagcctcaaagacttcagctgcatccac tcgcccaccttctcagaacagtttctgcgggtgcaggagagaatgagtgttcaggaggag ctggacaaactgctcttcctcatctcagaccagtccctgtctctactgccagagtaccac cagagaatcaaggtgctccaatccctgcagtacgtggacagtagtggtgcggtgcagctg aagggcagggtggcctgccagatcagtagccatgagctgcttctcacagagctactgttt gagaatgccctgagccccctggcccctgaggagagcgccgccctactgtcctgtctggtc tttcaacagaagacccaggtggagcctcacatcaccaacacactgaaggagggtattgag agagtgctggcggtggcccagcgtattggggagctgcagagggactgtgggataacccag acagtggaagaatttgtgggccagttcaagtttggcctgaccgaggtggtctactgctgg gccagaggcatgccatttgcagagattgcccagttaacagacgtccaggagggcacggtg gtgcgctgcatccagagactagacgaggtgctgaaggaggtgcgccaggcggcccgcatc gtgggagactcggtcctgggcagcaagatggagaaggcctccctggccatccgcagagac atcgtgttcactgcctcactctacacacactga

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