Salmo salar (Atlantic salmon): 106570098
Help
Entry
106570098 CDS
T04363
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106570098
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106570098
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
Others
106570098
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106570098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
VirE3
USP7_C2
SNX17-31_F2_FERM
DarA_N
Motif
Other DBs
NCBI-GeneID:
106570098
NCBI-ProteinID:
XP_013997573
UniProt:
A0A1S3M2X8
LinkDB
All DBs
Position
ssa14:52576103..52624032
Genome browser
AA seq
593 aa
AA seq
DB search
MADVEGDEIKSALPSASRNGPAAGSVVGIGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLRREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTIISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDNPLAIHYCFHQALDDVKKGFIKTEDTSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKRVEEEASDKDNQNCS
NNVGKNEWEQSEVGRLLRRGVQEHTYRCMLMSIKEQQPCGPYQGHFLPRHKDE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattaagtcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtatcggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtacgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagcgtggagggggccacccacaagcaggtggtggatctg
atccgggctggggagagggagctggtgctttctgtgctgtctgtgccgccccaggaggca
gatggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatttccatccccaccttcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgttccaagcgctaccgggagttt
gctatcctgaaccagaacctgaggagggagtttgccagttacaccttccccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcgtttcagacgtggagctgcggatagcc
ctgccagacaagaccatcatctctgtcagggtgcgcaagaacagcacaactgatcaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaatcactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacgtcagccgtgccgggcacctgtctggccctccgcaagtgg
cttttcacctctcaggaggaggaacttctcagggacaacccgctggccatccactattgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacacttcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
catgtcatcacggccatcagcatgcaccacttcaaactgcacgcctgcacagaggatggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcatgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacgggttgaagaggaggcctctgacaaagacaaccagaactgcagt
aacaacgtaggtaagaatgagtgggaacagagcgaagttggtcgtctccttaggcgaggt
gtacaggagcacacatacaggtgtatgcttatgagcataaaagaacagcagccatgtggt
ccatatcaaggtcacttccttcccaggcacaaagatgaataa
DBGET
integrated database retrieval system