Salmo salar (Atlantic salmon): 106570138
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Entry
106570138 CDS
T04363
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106570138
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106570138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
106570138
NCBI-ProteinID:
XP_013997650
UniProt:
A0A1S3M3J5
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All DBs
Position
ssa14:complement(58599555..58629557)
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AA seq
2564 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGAVDSGEKRDSDENRDRSPKSQTSPQTSSHSESSQDE
SVTLTARATPEREVHREGPRLPETAAAAAGSLPGKSEDSRPGCVKSLSAHSTDSSSSAAS
AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAASNHGYHGNPGTPPLNSSSAHCGS
NTGSQSSGVSSGPGSTASEGGSLTDINSQTRRPVEDYITIIAPPQDRDNTPGPPPTGDRD
RRGPEGGREISPSPVRCSSTDTASEHDPDVSEPRRPDFPHTNPNTEAHTLDLVQRSTPRT
PTPQSLSDALADALAKGLKNQRVLARQARRRTGKGEEENGRGGGRESMDSVFRAGVVRRV
SGEHGSLEVQLNGEKELYCYPFREGPQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG
GTTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRVGTPTAVWVSRQSL
RLLVPPWDLDLGPSGGGREEGNAAAERGREREREREDRDEIEVEQELCFISHGMGLSAAV
AGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVSGRDWEREKDLVERERELQRKQER
DNRERAKQHHHFMPLTPEEDIEVSHFSMVPMGATGGAAKALTVSQHRHILSKPPPGYLSP
HLSVVRGLGGTPLVGPHLALNPHPPASPTVLMGLESGALAAGAAVIATPQLPPLPSSSSR
GSLDKPPSSNANSHGAPGGGGGSGSASSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNG
KQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLGG
GRTSSEFDWDNTSRDSSEASSRGGDSRPRMVLPSFLPQDLSHFDFDECEAATIMVSLGSS
RSGTPSYSPISNQSPFSPTPSPSPTPLLSFRPATFSPITAPPSLTPRRHRHLSGTKMSTP
GSERHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLPDQQLGETIGLRPATFRVLSP
QSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRRIVPLRDSPV
IVRNPDVPLAKFTEGPLGRRGGGGCSSRDHSQPLHLATGLQAPVPINGAPTNGAVLMRNP
ASTLVLVTSTQSLTPAVTGRPVHSSPAPSGGSASMSSTGSALSSSGSGGREWERKSGGHQ
DGIGGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVEPRSVPVFPW
HSLVPFLEPSQSSAAAQPTDGQQLVNQSNEPRCGVALVSDGRVGPTDAGRGSPSRPPTSS
NDNNPQAERAERGGADSETESDADDPFFPGVANDTAPSTGTMKRRSQSLSALPKDGDRKR
EKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPQEKQKYHDLAFQ
VKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESAEPELVSQGMELKGTSG
PGWPGGSEHHVGAYSGQLPRPRAFSQSAVHSLERRERARDVEKLCQEGTGSFRSRPPTLS
LAQCGGSEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQQAF
QPVVRSSLPSSTNTSHADSHSDSTKGDTRGSDGESSERKRKRGMEGGEEGSGESKRGRGG
GWHVPSNSIPGSAPNTSTPALGYGLTQVLGAVRMAPTMVTNVVCPITSMPIPIASKPMEG
SIALSALPGEKKATLLIGGPGAGGGPFTAGGGYLSSSSPNPVSVGPGGLQVTSLVLGGAF
PNQSIQLIAPPQPILSSTHSSLPLPLPLLQPQFLPAGSLIPPGGAKPGLTQVQYILPTLS
SVSANPKSTSPQLTQQPTGVRMLPSTPPTHVSLANGIHSGAGVEIRYATVGGVSPGERVQ
AQSPVLQSKMLVPMATVRTSSTPQPSSLVAPPLPVQNGALPGSKIIQIAPMPMGQTNVHS
AGAVHPGSPFHVSMATATVMTPGITPPQTVLLTSPPTRITYVQSGTGVVSTATVQTPPSP
GPAYLPSSLATLGFTAIAPAGQALVHPLVAGQPPWLAPALSPGAPGTGRQPLTAIYPAQN
VTLAPDVVSMTSVPPNLAQELSGQSSRSAVGVQGSKDVTRSHEEGMPHLTAEMEHKPQVE
GQAQRKTKTQIKKESIKKEKMTEDVEAHSKPGANSMGTSSSNTPTGSEENGGRASRVKEE
NTDDARDYAKEKQTDVNGERERGIKMECGTPEPERSRETDDWPHEGHNKGDSGNGGHSKG
AGPREPPHLPTGQDTPPPAPQTDRDAPPSAKKTKFRPPPLRKPSDSIDKALSGSYFEERF
AELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAARSR
LSSCSSEPNTPKSDVKCEGDIFTFDRAGAESEDVLGGMDRVPYSSLRRTLDQRRALVMQL
FQEHGFFPSAQATAAFQARYSDTFPSKGCLQLKIREVRQKIMQTATPGTPGISEPGGSTT
GVPGSTDSTSAANGSSNTNTGDGTGTEPGERGRSPEEPRSLGKL
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcaaggaaggcgctcgcccccgtcgacccgggccaaaggtggg
aagagacggggggcggtggacagtggggagaaaagagactcggacgagaacagagaccga
tcccccaaaagtcagacctcaccccaaacctcatctcactcagagtcttctcaggatgag
tcggtgacgcttacggctagggccacgccagagagggaggtccacagagaggggccccgg
ctcccagagacagcggccgcagcagcagggtccctccctgggaagtcggaggactcccgc
ccggggtgcgtcaagtcattgagcgcccacagcacagacagcagcagcagcgccgccagc
gccgccaacagccccaacccctcgtccaaccggaagacggccaccttcaaggcccgcgtc
cccaagaagaagtacacctctgagcactgtgctgctgcagctgctgccgccagcaaccac
ggataccacggcaaccccggcacgcccccactgaacagcagtagtgctcactgtggcagt
aacaccggtagtcagtcttcgggcgtatcttcggggcccgggtcgacggcgagtgagggt
ggttcgctcactgacatcaacagtcagaccaggagaccagtggaggactacattaccatt
atagctccaccacaggacagggacaacacacctggaccccctcccacaggagacagagac
aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca
gacacagccagcgaacacgaccctgacgtgagcgagccacgccgccccgactttccccac
accaaccccaacaccgaagcacacacactggacctggtgcaacgtagcaccccacgcact
ccaaccccacagagcctgtcggacgcgctagccgacgccctggccaaaggtctaaagaac
cagcgggtgctagccaggcaggctcggaggaggactgggaagggggaagaggagaacgga
aggggaggggggagggagagtatggactcagtgttccgagcgggcgtggtgcggcgggtg
agcggcgagcacggcagcttggaggtgcagctgaacggcgagaaggagctgtactgctac
ccgttccgcgagggcccccaggggcccgtggacatcatcatggacgccccgccgcccggc
tcccaggccgtgcccattggcacccctgtgtgcgtgcccttcggaggcaatgaggacggc
ggcaccacagaagcccagcgccagtggtaccgagagggcctggtcacccaggtggactcc
cacccggctgtgtcctacccctatagagtgttgttagaggacagagcgcccccaggggat
gaggagggggatggcagggtgggcactcctacggctgtgtgggtgtcccgtcagagcctc
cgcctgctggtgcccccctgggacctggaccttggaccctccggaggggggcgagaggag
ggcaatgctgccgctgagagggggagagagagggagagagagagagaggacagggacgaa
atagaagtggagcaggagctgtgtttcatcagccatgggatggggctcagcgcagctgtg
gctgggtccgtgttggggaggctttcataccctggaacggcccccgcctcctcgtcttcc
tccactgtcagctcccccgtcacccccgcctcggtgctgagtctggtgtccggaagagac
tgggagcgagagaaggacctggtggagagagagcgggagctccagaggaaacaagagaga
gataaccgagagagggccaagcagcaccaccacttcatgcccctgacccccgaggaggac
atagaggtgtcccacttcagcatggtgcccatgggggcgacgggaggggcggccaaggcc
ctgacggtgtcccagcacaggcacatactctccaagccgcccccgggctacctcagcccc
cacctgtccgtggtacggggcctcggaggcaccccactggtgggcccccacctggccctc
aacccccaccctcctgcctcccccacggtgctaatgggcttggagtcgggagccctggca
gcgggggcggccgtcatcgccacccctcagctccctcctctgccctcctcgtcctcccgc
ggctccttggataagccaccctcgtcaaacgccaactcccacggtgcacctggagggggt
ggaggctcaggttcggcgtcctcgtcgcgctcccgcacccctctcacagcagcccagcag
aagtacaagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaacggc
aagcagtggaggaggctgtgctccagagagggctgctctaaggagtcccagagaagaggc
tactgctcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggcaga
gaccgtggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctgggcggc
ggccggaccagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagc
agtaggggaggtgattcacgcccccgcatggtcctgccctcgttcctgccccaggaccta
tcacacttcgactttgatgagtgcgaggcggccaccataatggtgtctctgggcagctcc
cgctcgggcacgccctcctactctcccatctccaaccagtcgcccttctcgcccacgccg
tcgccctcgccaaccccgctcctcagcttccgcccggccaccttcagccccatcacggcc
ccgccttctctcacccctcgccgccaccgccatctgagcggcactaagatgagcacgccg
ggctcggagcgccacctgtcgggcatcgtacccacgttccagaccaacctcaccttcacc
gtgcccatgagccccagcaagcggaaactggatgcccttcctccgcccctgcccctcccc
gaccagcaactaggggagactataggcctccggccagccaccttcagggtgctctcccct
cagagccagcccaccaccccctcctcgctctccttcccccggccccggagcgccaccagc
cgccccccgtcctccgccgcctccacccctccacccatgctggtgtcccccacccctccc
tccccactgccccaggaccccagcccccgccgcatcgtgcccctgcgagactcccccgtc
atcgttaggaaccccgacgtccccctggccaagtttacagagggacccttagggaggagg
ggaggagggggctgctcctccagagaccacagccagcccctgcaccttgccaccggcctc
caagcacccgtgcccatcaacggcgcccccaccaatggagcggtcctcatgcgaaacccc
gcctccaccctggtccttgtaacctccacccagtccctgactccagccgtcacaggacgc
cctgtccactccagcccagcccccagtggtggctccgcctccatgtcctctactggctcc
gccctctccagctctggatcaggcggtagggagtgggagaggaagtccggagggcatcag
gacggcattggagggacactgccccagccggtagcctgccacccctcgcccactgccctg
ctgcccctaatcctaccagccgagtcccctcaacctgcaccccgcaaggacatcatcatg
ggacggcccgggacagtatggaccaatgtggagccccggtcagtgccagtgtttccttgg
cattcattggtccctttcctggagcccagccaatcgagtgcggctgcccagcccactgat
ggccaacagcttgtcaatcagagcaacgagcctcgttgtggggtggccctagtgagtgac
ggacgggtgggcccaacagatgcaggacgagggtctccatcccgcccaccgacctcctcc
aatgacaacaacccccaagctgaaagagcagaaagaggcggagccgacagcgagacggaa
agcgatgcagatgacccgttctttccaggtgtagcaaatgatactgccccgtctacaggc
actatgaagaggcggtctcagtccctcagtgctcttccaaaagatggagacagaaagagg
gaaaaggaccacattcggcggccaatgaacgcgttcatgatctttagcaagcgtcaccgg
gcgctggtgcaccagaggcaccccaaccaggacaaccgcacggtcagcaagatcctgggc
gagtggtggtacgccctggggccacaagagaagcagaagtaccacgacctcgccttccag
gtgaaggaggctcacttcagggcccacccagactggaagtggtgcaacaaggacaggagg
aagtctatctctgagggccgagggaccccaggggccaaagaagcacgcgagaggagcatg
tcggagagtgcagagcccgagttagtgtctcagggcatggagctgaagggtacgtcaggc
ccgggctggcctgggggctctgagcatcatgtgggggcctacagtggccagctccctcgc
ccccgggccttctcccagagtgcagtacacagcctggagaggagggagcgggccagagat
gtggagaagttgtgtcaagaagggaccggctcgttccgcagccgcccccctactctctcc
ctggcacagtgtgggggcagcgaggacgtgaccagcgacgaggagcgcatggttatctgt
gaggaagagggggacgatgatgtcatggaggactcgtgccctgaaggatccatagacctc
aagtgtaaagagagagtgactgacagtgacgaggacgagccggatggacagcaagccttc
cagccagtggtccgttcctctctcccctcctccaccaacacctcccacgccgactctcac
tccgactctaccaagggggacacaagggggagcgacggagagagctctgagaggaagaga
aaacgagggatggagggaggagaagagggaagtggagaatccaaaagaggaaggggtgga
gggtggcacgttccttctaattccatccctggatcggcgcccaacacctcaacccctgct
ctgggttatggactcacccaggtgctcggtgcagtccggatggcccccaccatggtgacc
aacgtggtatgccccatcaccagcatgcccatccccatcgccagtaagccaatggaaggc
tccattgccctcagtgccctgcctggggagaagaaagccacgcttctgattggaggaccg
ggagcaggaggcgggcctttcacagcagggggtgggtacttgtcctcgtcctctccaaat
cccgtgagtgtggggccaggggggctgcaggtcaccagtctagtgctgggaggtgctttc
cccaaccagtctatacagctcatagccccgcctcagcctattttaagctccacccacagc
agcctgccactccccctccccctgctgcagccccagttccttcctgccggttctctcatc
ccccctggcggtgccaagcctggcctcacccaggtgcagtacatcctgccaaccctgtct
tctgtcagcgccaaccccaagagcacctccccccagctaacccagcagccaaccggcgtc
cgcatgctgccctccactccgcccacacatgtctccctggccaatggaatacattcgggg
gcaggagtggagataagatatgccacagtgggaggggtcagccctggagaaagagtccaa
gcccagtctccagtcttgcagagcaagatgttggttcccatggcaacagtgagaaccagc
tctactcctcagcccagctccctggtggctcctccccttcctgtgcaaaatggtgctcta
ccaggaagcaagattatccagatcgcccccatgccgatgggccagacaaatgtccactct
gctggagcagtgcatcctgggagtcccttccatgtatccatggcaacagccactgtgatg
actccgggcatcacaccccctcagaccgtgttgctaacctcacctccaacaaggatcact
tatgtccaatcgggcaccggagttgtctccacggcaacagtccagacccctccctctcca
ggccccgcctacctgccatcgtccctggcgaccctgggcttcaccgccattgccccggcc
ggccaagcccttgtgcaccctctcgtagcaggccaaccaccctggctagccccagccctt
tcccctggagccccggggactggacgtcaacccctcaccgccatttacccggcccagaac
gtcaccctggcgccagatgtggtttccatgacctccgtgccccccaatttggctcaagaa
ctgtccggccaatcatcacgctcagctgtcggcgtccagggttcaaaggacgtgacccgg
tcacatgaagagggaatgccacacctgactgcagagatggagcacaagccacaggtggag
ggccaggcccaaaggaagaccaagacacagataaagaaagagagcataaagaaagaaaag
atgacggaggatgtcgaggcacatagcaaacccggtgctaactcaatgggtacgtccagc
agcaacacaccaacagggagtgaagaaaatggtggtcgagccagccgcgtgaaagaagag
aacacggacgatgccagagattatgccaaagagaaacagacagacgtgaatggagagagg
gagaggggaataaagatggaatgtgggacacctgaaccagagaggtccagggagacagat
gattggccccatgagggccacaacaaaggggacagcggcaacgggggccacagcaaaggg
gctggaccgagggaacctccccaccttcccacaggacaggacactcctccgcctgcccca
cagactgacagggacgcgcccccctcagccaagaagaccaaattccgccctccgccactc
agaaagccctccgactccattgacaaggctctgtcggggtcctatttcgaggagcgcttt
gccgagctgccagagttcagaccagaagaggtgctgccctctcccaccctccagagtctg
gccacttccccccgagccatactgggcagctaccggaagaagaggaggaactccacagac
ctggactcgtctgcagaggaccccagctctcccaggaggaagactgcagctcggagccgt
ctctccagctgcagctcggagcccaacacacccaagagcgacgtcaagtgtgagggggac
atcttcacctttgacagagctggtgctgagtctgaagatgtcttgggggggatggacaga
gtgccgtactcctctctccggaggactctggaccagcgcagggctctcgtcatgcagctc
ttccaggaacacggcttcttcccttcagcccaggccactgcagccttccaggcccgctac
tcagacacctttccctccaaggggtgtctgcagctgaagatcagggaagtgaggcagaag
atcatgcagacagccacacctggaacccctggaatctctgagcccggcgggtcaacaaca
ggggtcccggggtcaacagactccacctccgccgccaacggctcctcaaatactaacact
ggagatggtacagggacggagcctggagaaagagggaggagtcccgaggagcccaggagt
ttgggtaaattgtag
DBGET
integrated database retrieval system
