Salmo salar (Atlantic salmon): 106570386
Help
Entry
106570386 CDS
T04363
Symbol
zc3h12a
Name
(RefSeq) zinc finger CCCH-type containing 12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106570386 (zc3h12a)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106570386 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
106570386
NCBI-ProteinID:
XP_013998125
UniProt:
A0A1S3M4Z0
LinkDB
All DBs
Position
ssa14:complement(72376613..72391195)
Genome browser
AA seq
611 aa
AA seq
DB search
MHPSGTQCSAPEESGKTATNPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELV
QTGASPEGMEKEGAPTTMSVLIASGETLSSLPLTPPSIWEEAASEEGDDLKPIVIDGSNM
AMSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVSITDQHILRELERK
KIMVFTPSRRVAGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLL
MYSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGIKCKFYHPERVN
QSNRSLADELREKAKLPLSPQKHPTTGPGLAYGLSLEEEMAQKLTVEQWKGSLKKGLTTE
NVLLKGGHRASWRSPAKASTNRHSLTDLESALASGSQERLDSGLGSFESQASDPSRNHCD
HYGNAGYRNCQSQSAPSMKQQRCSLPSNLPCSCCSHAPQPSLGPSAGYQQHHSPHHRMGP
ASTHNPDMMTYYPPCYPNYGTPMYPVSMHQYSHPSDFQQQGRVHRSQQTFWSDPFGTYPQ
TLHSIAQVEQQRHWPPARTQPSPHGEGREREDVRKKLLAIFNGRLVDRAMDMFPHLMDPQ
RLAAEILTLRL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgagtggcacccaatgctctgccccagaggagagcggcaagaccgccacaaac
cctggagaggctcagctggacttctaccgtaaactgggctactccccagcgcaggtccag
accgtgctgcagaagtttggcctgaacacagacactaacagaattctgggggagctggtg
cagactggagccagcccagaaggaatggagaaggagggagccccaactaccatgtctgtc
ctgattgccagtggggagacccttagtagcctgcccctcacccctccatcaatttgggag
gaggcagccagtgaggagggagatgacctgaaacccatagtgatcgatgggagtaatatg
gctatgagccacggaaacaaggaagtgttttcctgcctgggaatccagctggctgtgaac
ttcttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggag
cagcccagaccagatgtctccatcacagatcaacacattttgcgtgagctggagagaaag
aaaatcatggtgttcaccccttcacggcgtgtagcgggcaaacgtgtggtctgctacgac
gatcgcttcatcgtcaagctggcgtacgagtcagacggtgtcatcgtgtccaacgacaca
taccgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctc
atgtactcgtttgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggt
cctaccctggagaactttctacggaaggttcctcggttaccacgcaaacagccatgtcct
tacggaaggaaatgcacttacggaataaagtgtaaattctaccacccggagcgagtcaac
caatccaatcgctctttggctgacgagctgcgggagaaggccaagctgcccttgtcacca
cagaaacaccccaccacaggtcctggacttgcctatggcctttccctggaggaggagatg
gctcagaaactgaccgtagaacagtggaagggctccttgaagaaaggcctcaccactgag
aatgttcttctcaagggaggccatcgcgccagctggaggtccccagctaaggccagcacc
aaccgacattccctgaccgacctggagtcagccctggccagtggctctcaagagaggcta
gattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccactgtgat
cactatggcaacgctgggtacaggaactgccagtcacagtccgcccccagtatgaaacaa
caacgctgttctctccctagcaacctgccttgtagctgctgctcccatgctcctcagcct
tcactgggccccagtgcaggataccaacaacaccacagcccacaccatagaatgggccca
gccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactatgga
acaccaatgtatccagttagtatgcatcagtacagccaccccagtgacttccaacagcag
ggcagggtccaccgttcacagcagaccttctggtcggacccgttcgggacttatcctcag
actctccatagcattgctcaggtggagcagcagagacactggccccctgcccggacacag
ccgagcccccatggggagggcagggagagggaggatgtcaggaagaagctgctggccatc
tttaacggccgtctggtggacagggccatggacatgttcccccatctcatggacccacag
agactggctgctgagatcctcaccctgagactgtaa
DBGET
integrated database retrieval system
