Salmo salar (Atlantic salmon): 106570437
Help
Entry
106570437 CDS
T04363
Symbol
pex1
Name
(RefSeq) peroxisomal biogenesis factor 1
KO
K13338
peroxin-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106570437 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106570437 (pex1)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
106570437 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_22
AAA_16
AAA_14
nSTAND3
TIP49
ABC_tran
RNA_helicase
AAA_28
AAA_5
ATP-synt_ab
AAA_18
AAA_33
DUF815
RuvB_N
AAA_24
Sigma54_activ_2
NACHT
AAA_29
APS_kinase
Motif
Other DBs
NCBI-GeneID:
106570437
NCBI-ProteinID:
XP_013998241
UniProt:
A0A1S3M5I1
LinkDB
All DBs
Position
ssa14:complement(76986129..77006183)
Genome browser
AA seq
1277 aa
AA seq
DB search
MLGNHGIQPVTLIFHNTKNCFLHLPSNLLKQLSLHDNQALELSWGHDARVFLSWTRSRSP
ANQEDHKVALSRQLGEKLGLRDGEQGFLRSCQQVLSVQQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFPDAVFPVWVDQRTVIYIRIASLTPTVPYGRLEQFTELHVSPKIRAGSE
DLSCAPFGSSLSNQNQPLHRQPNFDLSPSSRSSQEFSVQETGLPVEQRPNTAALQSPQQW
GGIADVKSLVRYMLTGNYDPVRETPPIPTIPALLSDSVFRVCRAPPVSPGPLSATHGVVH
ILPWGQQMGGNINGGQPAVTYGLLSKVLSPKEVRERAKQAMEKKKSGGAGGAPQPGGAGG
AGDREEKEDATVVKVVCHLTEGLKGKQVSSRERELHSGKVWIPQSLETSLHINPHSSVRI
KPIKSTPKVATSIHLQPLKPLLAAVSEVEIQTAFLGWLHTQSHEPLACLTGRCNTILLPA
TEGKVEFALTVLKSEPEPESKAPDQLFLLAPCVIQKSDIQVVREPVTMPTVKAMGETPNQ
DLPSLSSLGGVEEQSKTGFDFLSHSLMGRPLSWELVSTGRGLRGGALLITGAKGSGKTAL
SKALCRKTMEDLDAHVEVVDCKKLKGKRAETVRQILEEVFEQAVWRQPSVVLLDDLDHVT
GAPTSPEHEHGPEALLRLHIAQSLRDMVHDVVVRSSLVCLVISSHCEHSLHPSLREVQGS
HFLQGFIHIQPPDQSVCQAQRGEILRCLILSKTAVSKETLHTLDLGIVAKETEGYLPRDL
ALLLERAIHANALHRARSTQGVCLSWRDFVQALKGFTPPTLWGAQLQSPSGAGLERVGGL
HQVRQLLMDTILLPAKYPVLFSSLPIRQRSGLLLYGAPGTGKTLLTGAVAKESGMNFISV
KGPELLSKYIGASEQAIRDIFQRAQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLL
TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQEARVEILRALSHSVP
LADDVDLEQIAGATDTFTGADLKALLYNAQLEAIHSSLGPSLLHDLGSGSDSDISLSSMI
FLNHSSGSDDSTGEGERGCGLDHSMVLLDLGDVPPEDPRGNIWRLYFGSSFESELGNPSP
SGLNSQGVSGPNSNDLTGASVRDPGFSHPPAYMSSLQDGYEELSHEQLDRLRLEISNIKS
NYRRATEDSVPVQGGPIRPGLLLCQAHLTSALDATRASLSKQDWRRYTDLYESFGALGEG
KSQSTVTFKPGQRVTLA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatcatggcatccaacctgtcactctgattttccacaacacgaagaactgt
tttcttcaccttccttcaaacttgttaaaacagctctctctccatgacaaccaggccctg
gagctgtcctggggtcatgatgcccgtgtgttcctcagctggaccagaagcagaagccct
gccaaccaggaggaccataaagtagcgctgagcaggcaactgggagagaagcttggactc
agagatggagagcagggcttcttgcggtcgtgccagcaggtcctgtctgtacagcaggtg
tttgtggaaccactctcctctgacgactgggaaatcctggagctccacagtgcagcgctg
gagcagcagctcctggatcagattagagtggtgtttcctgatgcagtgtttcctgtgtgg
gtggaccagagaacagtcatctacatcagaatcgcttcactcaccccaactgtaccgtac
ggtcgattagagcagttcacagagctacacgtctctcctaaaatccgtgctggaagtgag
gacctctcctgcgctccttttggatcatccttatccaatcagaaccagcccctccacagg
cagccgaactttgacctctcaccctcctccaggtcctctcaggagttcagcgttcaggag
actggacttcctgtagaacaacgtcctaacactgctgccctccagagcccccagcagtgg
ggtgggattgcagacgtaaagagcctggtcaggtacatgctaacagggaactatgaccct
gtgagagagactccccccatccccaccatccctgccctcctcagtgactcagtcttcaga
gtgtgcagagcaccgcccgtgtctcctggccctctgagtgccacccatggggttgtccac
atcctgccctggggccagcagatgggaggtaatatcaatggaggccagccagctgtgacg
tacggcctactgtccaaggtcctctctcccaaggaggtgagagagagggctaagcaggcc
atggaaaagaagaagagtggcggtgctgggggtgctccccagcccggtggtgctggtggg
gcaggagacagggaggaaaaagaggatgccactgtagtcaaggtggtgtgtcaccttaca
gaggggctgaaagggaagcaggtgtcatctagagagagagagctccacagtggaaaggtc
tggatcccacaatccctggaaactagtcttcatatcaatccacactcatcagtgagaatc
aagccaatcaagtcaactcctaaagtagccaccagtatccacctgcagcctttaaaacca
ctgcttgcagcagtgagtgaggtggagattcagactgccttcctgggttggctgcacacc
cagagccacgaaccactagcctgtctgaccggccgctgcaacaccatcctcctacctgcc
actgaaggcaaggtggagtttgctctgactgtgttgaagtcagaacctgagccggagagt
aaagctcctgaccagttgtttctgttggctccatgtgtgatacagaaatcagacatacag
gttgtcagggaacctgtaaccatgcctacagtgaaagccatgggtgagacccctaatcaa
gatctaccctctctcagcagtcttggtggtgtggaggagcagagtaagacggggtttgac
ttcctctcccacagcctgatgggacggcctctctcctgggagctggtgtccaccggtcgg
ggcctccggggcggagccctgctcattacaggggccaagggaagtgggaagacggctctc
tccaaagctctgtgtaggaaaactatggaggacctggatgctcatgtggaggtggttgac
tgcaaaaagctgaaagggaagagagcagagaccgtgaggcagatattggaagaggttttt
gaacaggcggtgtggagacagccctcggtggtcctgctggatgacctggatcatgtgacg
ggggcaccgacctcaccggaacatgaacacggaccagaggctctcctaaggctgcacatt
gcccagagtctaagagacatggtacatgacgtggtggtgcgctccagcctagtgtgtctg
gtcatcagcagtcactgtgaacattccctccacccgtcactcagggaggtgcagggctcc
cacttcctccagggcttcatacacatccagcctcctgatcagtctgtctgtcaggcccag
agaggagagatcctgcgctgtctgatcctcagtaagactgctgtatccaaggagacccta
cacacgctcgacctggggattgttgccaaggaaacagagggctacctgccccgtgacctg
gccctgctgctagagagggccatccatgccaacgccctacacagggcacgcagcacccag
ggggtgtgtctgtcgtggagggattttgtgcaggctctgaagggcttcacccctcccact
ctgtggggggctcagctgcagagccccagtggtgcaggccttgagagggtaggggggctg
catcaagtacgccagttactcatggacaccatcctgctaccggccaagtatccggtgctc
ttctccagccttcccatccggcagcgctcaggacttctgctgtacggcgctccaggcact
gggaaaaccctgctgactggtgccgtggccaaggagagtgggatgaacttcatcagtgtc
aagggtcccgaactcctcagcaagtacattggagccagtgagcaggctatcagagacatc
ttccagagagcccaggctgctaagccctgcatcctgttctttgatgagtttgactccttg
gcacccaggaggggccacgacaacacaggggtcactgaccgggtggtcaaccagctactg
acccagctggatggggtggagggactacagggtgtgtatgtcctggctgccactagtcgt
ccagaccttatagaccctgccctgctgaggcctggccgcctggacaagtccctctactgc
ccccctcctgaccaggaggcgcgtgtagagatcctgagggctctgagccactcggttccc
ctggctgacgatgtggacctggagcagatagccggggccacagacacgttcactggcgct
gacctgaaggccctgctgtacaacgcccagctagaggccatccacagcagcctggggccc
agcctgctgcatgacctgggctcgggttcggacagcgacataagcctgtcctccatgatc
tttctgaaccacagcagtgggtctgatgactcgacgggggaaggggagagagggtgcggg
ctggaccactccatggtgctgctggacctcggtgacgtcccccctgaggacccccgtggt
aacatctggaggctgtacttcggcagctcctttgagtctgagctgggcaacccttccccc
tcaggactgaactcccagggtgtctcggggcccaactctaatgacctgaccggtgcgtcg
gtcagagaccctggcttctcccaccccccggcctatatgtcctctctacaggatggctac
gaggagctcagccatgagcagctagaccgcctccgtctggaaatcagcaacatcaagagc
aactacagacgagctactgaggacagtgtcccagtccagggtggccccatcaggcctggt
ctgctcctgtgtcaggcccacctcacctcagccctggatgccaccagagcctccctcagc
aagcaggactggaggaggtacacagacctgtatgagtcctttggagctttgggagaagga
aagtctcagagcacagtgacattcaaacccggccaaagagtaacgctcgcttaa
DBGET
integrated database retrieval system
