Salmo salar (Atlantic salmon): 106570538
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Entry
106570538 CDS
T04363
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106570538
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106570538
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7615
Motif
Other DBs
NCBI-GeneID:
106570538
NCBI-ProteinID:
XP_013998451
UniProt:
A0A1S3M642
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Position
ssa14:complement(80593766..80633027)
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AA seq
811 aa
AA seq
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MQHPNFETQHPLQPEGEQETGFDPLHNLNRNLSCGGSLDSSTLSESTFLSYRKEWDDLFL
NSNYLTRIRQEGINGRLRSSRFRSVCWKLYLEVLPEDKSQWINKTKELRSQYEKIKETHI
TNPRKAAGQQDLVVNNPLSLDEGSLWNKFFQDNELRGMIKQDVMRTFPEMRYFQEEDVRT
KLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETAHPSEEMMCLLNPM
FQEHDAYAMFSQLMETAEPWFSSFQREVRRGKEEMLTSMPFARPQDLGPSVAIVTKVNRI
QDQLVKKHDVELHMHVTRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLDL
VDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRPANYQ
FQQNLDYYKTRGADLVNSTRAKTAPLNINKVSSSLLSFGRKLIAPAMSGGVASVISPINS
EIRSAPSPLTAAPQAEPLSSGHAPLQTHSQSQHQRLLKSESMPVYLSQGQTSRTVGSSPS
IESLSGGQGHNTASPPLPVSRGSDISTSSPPLSATKKDSFFITRSHSKTMGKKEAEEELE
AQVSFLQGQINDLEAMSKYCAKMMNTHIGRIQEVILQEHLEKEDEVLVSLAGLKQIKDIL
KGALHFNQSLLEAEENEEITIADDHYDHANSHHEDQPYLAAPQRGDADGEQEEELEHAPP
EQQASPPECSLCGGSEGRNWDDYILVSQDGELQPTEGGVERTPPIRQLHGSVRVEPFQDP
LMGAASGSSSPDEDSIHSKDSDFAIVNSQDL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaactttgagacccagcaccctctccagccagagggagagcaggagaca
ggttttgacccactccacaacttaaacaggaatctcagctgtggaggatctctggatagt
agcactttgtctgagtccactttcctctcctacaggaaagaatgggatgacttgtttctg
aacagtaattacctgaccaggatccggcaggaaggcatcaacggtcgattgcggagcagc
cgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaggataagagccaa
tggatcaacaagaccaaggagttacgatcccagtatgagaagatcaaagagacacacatc
accaacccccgtaaggctgcaggtcagcaggacttggtggtcaacaacccactctcactg
gacgaggggagcctgtggaacaagttcttccaggacaacgagttgagagggatgatcaaa
caggacgttatgagaacgtttcctgagatgcgttacttccaagaggaggacgtaagaacc
aagctgacagacatcttgttctgttatgcccgagagaatgaacagttactgtacaaacag
ggaatgcatgagttgttggctcctattgtgttcgtcctacactgtgaccatcaggccttt
cagcacgccagcgagaccgcccaccccagtgaggagatgatgtgtctgctgaatcctatg
ttccaggaacatgatgcctatgccatgttttcccagctgatggagacagcagaaccctgg
ttctccagcttccagagagaagtcagaagggggaaggaggagatgctgaccagcatgccg
ttcgcccggccgcaggacttggggccgtccgttgccatagtaaccaaagtgaaccgcatc
caggaccagttggtgaaaaagcacgatgtggagctgcacatgcacgtcacccgcctggag
atcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggccgtgagttcccc
ctgcaggacctgctggtggtctgggatgctctgtttgctgacagcatcactctagacctg
gtggactatgtcttcgttgccatgctgctctacatcagagacgccttgatagcgagtaac
ttccagacctgtctgggccttctaatgcactacccacctataggagacatccacacccta
ctacacaaggctctgttcctcagagatcccaagaacaatcctcggccggccaactaccag
ttccaacagaatctggactattacaagaccagaggggcagaccttgtcaacagcacccgt
gccaagacggctcctctcaacatcaacaaagtctccagcagcctgctcagctttgggagg
aagctcatcgctcccgccatgtcagggggtgttgccagcgttatctctccaatcaacagc
gagattcgttctgccccctcccccctcactgcagccccccaggccgagcccctgtcctct
ggccacgcccccctgcagacacactcccagtcccagcaccagcgcctactgaagtctgag
agcatgccagtctacctgagccaaggccaaacctccaggacagttggctcctcccccagc
atagagagtctctctgggggacagggtcacaacacagcgtccccgccccttcccgtctcc
aggggaagtgacatcagcacctcgtccccacccctctcagccaccaagaaggactccttc
ttcatcactcgctcccacagcaagaccatgggcaagaaagaggccgaggaggagttggag
gcccaggtgtccttcctgcagggtcagatcaatgacctagaggccatgagcaagtactgt
gccaagatgatgaacacacacattggtaggatccaggaggtgatcctacaggagcacctg
gagaaagaggatgaggtgttggtgtcactggctggacttaagcagatcaaggacatcctg
aagggagcgctgcatttcaaccagagcctgctggaggctgaggagaacgaggagatcacc
atcgctgatgaccactatgaccacgccaacagtcaccatgaagaccagccttacctggcc
gcgccgcagcgtggcgacgctgatggagaacaggaggaagagctggagcacgcaccacca
gagcaacaggcgtctcccccagagtgctctctgtgtgggggctcggaggggaggaactgg
gatgactacattctggtctctcaggacggagagctgcagcccaccgagggaggggtggag
aggacccctccaatcagacagctccatggctcggtcagggtggagccgttccaggacccc
ctgatgggtgcagcgtcgggttcctccagcccagacgaggacagcattcacagcaaagac
tcagacttcgccattgtcaactcccaggacctgtga
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