Salmo salar (Atlantic salmon): 106570648
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Entry
106570648 CDS
T04363
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106570648
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106570648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106570648
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106570648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
106570648
NCBI-ProteinID:
XP_013998594
UniProt:
A0A1S3M6K1
LinkDB
All DBs
Position
ssa14:86020985..86027811
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AA seq
394 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGRSGGGYGRGGRDRYGPPARTDYRLIVE
NLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRK
IRLIEDRPGAKRSKRSYSRSRSRSRSRSRSRRSRKSRSRSESSSRSRSRGAASRSRSRSH
SKKDKTKGSREEERTNGAHKAKEGRGGRDEGRSKSRSRSRSKSKKSSKKEGKKSRKDESR
SRSRSRSAAKDRSRKSGSKSREPAKSDDEGGVAEKGASRSRSHTPAESKPKSKSKSPSPS
PAKARSRSPSVSRSESRSKSRSASRSRSRSLSES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttatattggaagattgagctatcgagcaagggaaaaggacgtcgagaag
ttcttcaagggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctacggc
tcaggaggaggaggaggaggaggaggcggaggaggtggaagaagcgggggcgggtacggg
cgtggtggcagagaccgatatggcccaccagcaaggacagattatcggctgatcgttgag
aacctgtccagccgctgcagctggcaagacctgaaggactacatgaggcaggcgggtgag
gtgacgtatgctgacaccaataagggacgcaggaacgagggagtgatagagttcaggcta
tactctgacatgaagagagccctggagaagctggacggcacagaggtgaacggcaggaag
atccgtctgattgaggaccgccccggggccaagcgcagcaagcgctcctactctcgcagt
cgcagccgctcccggtctcgctccaggagccgtaggtcccgtaagagccgcagccgcagt
gagagcagcagtcgctcccgctccaggggtgctgcctcccgctcccgtagccgctcccac
agcaagaaggacaagaccaagggcagcagagaggaggagcgcaccaacggtgcccacaag
gccaaggaggggcgcgggggccgggacgagggccgcagcaagagccgcagcaggagccgc
agcaagagcaaaaagagcagcaagaaagaagggaagaagagcaggaaggatgagtctaga
tccaggtcccgctccagatcagcagctaaggatcgctcccgcaagtctggctctaagagc
cgcgagccagccaagagcgacgacgagggaggtgtagccgagaagggggcctcccgctct
cgctcccacacccctgccgaatccaaacccaagtcaaagtccaaatctccatctccctcc
ccggccaaagcccgctcccgttccccctccgtctctcgctcagagtcccgctccaaatct
cgctccgcgtctcgttctcgctcccgctctctatcagagtcctga
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