Salmo salar (Atlantic salmon): 106570704
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Entry
106570704 CDS
T04363
Name
(RefSeq) homeobox-containing protein 1-like
KO
K24885
homeobox-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106570704
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106570704
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HlyD_D4
HTH_3
Motif
Other DBs
NCBI-GeneID:
106570704
NCBI-ProteinID:
XP_013998651
UniProt:
A0A1S3M650
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Position
ssa14:complement(88362695..88387148)
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AA seq
523 aa
AA seq
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MRQWCLPAAAPRTEPLPTGRLSPPLSDVRMECCEVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALASLERLDPDHRPPYCNDTHTANPTTNTTPTTASAPAPSSSSSSSSSLSLASVTTQT
PGLDVASLSPSNSYETSPPPLYPPAVGVQRSFSYDMAEEDWDLEEKVEEYMRRDSNLVKE
EIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRSFYRWYLLEKNNPGLR
WSESQHGPAALGLGLSGLGQGLGQNLGSGPRAARGGDRDVTGTGNAATGATATTAATAST
TWGRQRELLMHLLPWYTAAATQPGATLSMRSLVKEEPDWRTVVSPGERSGVVGGPLRLRR
GSRFTWRKECQSIMESFFVENQYPDEAKREEIANACNSVIQKPGGKLSEFERVTALKVYN
WFANRRKEMKRRANIEAAILESHGIEVRSPSCHSNGEELEPHDYAEQVNQRFLEQEEISS
RKDLDQQEPSSLAAVNVLPPPSPAPQVLEHKADESKRETVDEE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctcccggctgcggcaccgcgaaccgaacctctgcccacagggcgc
ctctcaccgccgctgtcagatgtcaggatggagtgttgtgaggtggagccacgctatacc
atcgagcagatcgacctcctccagcgtctccgtctctcagggatgaccaagccacagatc
atccaggctttggcgtccctagagcggctagatcccgaccatcgccccccgtactgcaat
gacacccacaccgccaaccccacaaccaacactacccctaccacagcctccgccccagcc
ccttcctcctcttcctcctcctcttcctccctctccctggcctccgtcaccacacagaca
cccgggctggatgtcgcctccctgtcgcctagcaacagctacgaaacctcgcccccgccg
ctgtaccccccggcagtcggagttcagaggtcattcagctatgacatggcggaggaggac
tgggacctggaggagaaggtggaggagtacatgaggagggacagtaacctggtgaaggag
gaaatcaaaaccttcctcaacaaccgcaggatctcccaggccatcgtgggacaggtcaca
ggtatcagtcagagttacatctcccagtggttgctgcagcagggcttggagatgagcgac
tccaaacgcagatctttctaccgctggtacctgctagagaagaacaacccagggctgagg
tggagtgaaagccagcatggcccggcggctctgggcctggggctcagtggtctcggccag
gggctgggccaaaacctgggctctggacccagggcagccaggggaggggacagagacgtc
acggggacgggcaacgccgctacgggcgccacagccactacagccgcgaccgcctccacc
acctggggcagacagagagagctgctgatgcacctgctgccatggtacactgcagccgcc
acacagccaggtgctaccctgtcgatgcgctctctggtgaaggaggagcctgattggagg
acggtggtcagtcccggggagaggagcggggtggtgggcggtcctctgaggctgcggagg
ggaagcaggttcacctggaggaaggagtgccagtcaatcatggagagtttcttcgtggag
aaccagtaccctgacgaggcaaagagagaggagatcgctaatgcctgcaactcagtcatc
cagaaacctggaggcaagctgtctgagtttgagcgtgtcacggctctgaaggtgtacaac
tggtttgccaaccgccggaaggagatgaagaggcgggctaatatagaggcggccatcttg
gagagtcatggtatcgaggttcgcagcccgagctgtcactccaacggggaggagctggag
ccacatgactacgcagagcaagtgaatcaacgattcttagagcaggaagagatttcatcc
aggaaggaccttgatcaacaagaaccctcctcattggctgccgtcaatgtccttccccct
cctagccccgcccctcaggtcctggaacacaaagctgacgaatcgaaaagggagactgtg
gatgaggagtga
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