Salmo salar (Atlantic salmon): 106571105
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Entry
106571105 CDS
T04363
Name
(RefSeq) poly(A) polymerase type 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106571105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106571105
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106571105
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106571105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF6431
Motif
Other DBs
NCBI-GeneID:
106571105
NCBI-ProteinID:
XP_013999257
UniProt:
A0ABM3CYA3
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Position
ssa15:19534712..19555501
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AA seq
717 aa
AA seq
DB search
MPFPSTNQVLLGRETPKHYGITSPISLAQAKEADLVLTHRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIETVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMVDEFKQGLSITDEILQSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESREKEEVSTMWVIGVIFKKMEASENLNVDLTIDIQSFTDTVYRQAMNSKMFEADM
KIQAMHVKRRQLHQLLPNLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTAVPA
TVPTSTPVKCGPLGPPPSPIAAAASQPEAPAVKRPGSPMQEERKRFKSDAEDSAGEKKLS
GDTVPTSLTPSPLPTMGPPAAPQTSRQEMLEEEDPSPVPETRTSEDGAAAREGEECTTVE
AQVNEDSMSEEIPASEGEVKMEADIKRMVSADLSDVPLLPANPIPVVKNSIKLRLSR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccctttccgtctactaaccaggtgttgttgggtcgggagacacccaagcactatggg
atcacgtctcctatcagcctggcccaagccaaggaggctgacctggtcctcacacacagg
ctgactgaggccctgaaaccatatggggtatttgaagaggagctggaactacagcgcaga
atacacgtgttgggaaaactgaacacactggtgaaggaatggatccgtgacgtcagtgag
acaaagaatctgcctgcctcagtgatagaaacggttggagggaagatcttcacatttggg
tcctacaggttaggagtccacactaaaggtgctgacattgatgccctgtgtgtggctcct
cggcatgtggagagaacagacttcttctcctcgttcctggacaagctgaaggagcaggag
gaggtcaaagatttgagggctgttgaggaggcgtttgtccctgtgataaagctgtctttc
gacagcattgagattgatatcctgtttgcccggttagcgttgcaaaccatcccagagaat
ctggacctccgagatgacgggttgctgaagaaccttgacatccgctgcataaggagtctt
aatggttgtagagttacagatgaaatcctccatcttgtgcccaacattgagaacttcaga
ctgacactgaggaccatcaagctgtgggctaaacgtcataacatctacagtaacatcctg
ggcttcctgggtggtgtgtcctgggccatgctggtagccaggacctgccagctctacccc
aacgctgtggcctccaccctcgtacacaagttcttcctcgtcttctccaaatgggaatgg
cccaaccctgttctcctgaagcagccagaggactgcaacctgaacctaccagtctgggac
cccagggtgacccccagtgaccggtaccacctgatgcccatcatcacaccagcctacccc
cagcagaactccacctacaacgtctctgcttctacacgtgctgtcatggtggacgagttc
aaacagggtctgtccatcacagatgaaattttgcagagtaaagcagagtggtccaagcta
tttgaagcaccaaacttctttcagaaatacaagcattatattgtgttgctagcaagcgcc
cccactgagaagcagcacttggagtgggtcggtctggttgagtctaagatcaggatctta
gtaggaaacctggagaagaatgagttcataacgctggcccatgtcaacccccagtccttc
cctggacccaaggaaagcagggagaaagaggaggtcagcaccatgtgggtgataggagtc
atctttaagaagatggaggcatcagagaacctcaacgttgacctgaccattgacatccag
tcctttactgacacagtgtaccggcaggcgatgaacagcaagatgtttgaggcggacatg
aagatccaggccatgcatgtgaagaggagacaacttcaccagctactgcccaacctggtc
atgcccaaacgcaggaagcactcgacagaggggcttcgtcagatgaatgacagtagtctg
gacctttcgctggacagtgacaacagtatgtcagtgccgtcccccacggccgtgccagcc
actgtgcccacgtcgaccccagtgaagtgtggcccactaggtccccctccaagtcccatc
gcggctgcagccagccagcctgaggccccagctgtgaagagacctggctcccctatgcag
gaagagaggaagaggttcaaatcagatgctgaggattcagccggtgagaaaaagctttca
ggagacacagtccccacaagcctgaccccctctcctctgcccaccatgggccccccagcg
gccccccagacctctcgccaggagatgctggaggaggaggacccttccccagtcccagag
actaggacatcagaggatggtgcagctgctagagagggagaggagtgcaccactgtggag
gcacaggtcaatgaggacagtatgtctgaggagatacctgcttctgaaggggaagtcaag
atggaggcagatattaagcgaatggtcagtgcggacctgtctgacgtgcccctcctgcca
gccaacccaattccagtggtgaagaactctatcaagcttcgcctcagcaggtag
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