Salmo salar (Atlantic salmon): 106571202
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Entry
106571202 CDS
T04363
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106571202
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106571202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
TAF1C_beta-prop
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WDR54
Beta-prop_Nup120_160
MIOS_WD40
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
106571202
NCBI-ProteinID:
XP_013999459
UniProt:
A0A1S3M8X8
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Position
ssa15:23940215..23950461
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AA seq
648 aa
AA seq
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MLFRSIVDRGVCKRRCNDLSPKYNLSSLLDGYQCARHDEHITYGNVGVAFSTAPGLQGVL
AVASETGVLRLYNTENRQSPLLKEWLAHGNAICDLAWVPGEASLVTASGDQMAKLWDVTS
GELLGSFKGHQCSLKSVAFTRQEKAVFCTGGRDGNIMVWDTRYSKKDGFYRQVKQISGAH
NKMDRNTPSKTKKKRPGMDPSVDSQQSVTVVLFQDEHTLISSGAVDGIIKMWDLRKNYTV
YHHDPTPLQAYPYPGTSTQKLGYSGLVLDSTGSNLFSNCTDNNIYMFNVGGLKTTPVAVF
GGHLNSSFDVKSTVSPDNQFLASGSSDHHAYIWKIADPKQPPMMLQGHRQQVTSIAWCPT
DFTKIASCSDDDAVRIWRLDRGTDRAKSSVGKDNLVGWACPKPATTMPSPMPLNQAECTP
AKSPRPRRLGALASPQPAACAPRGADLPLASNTTAASPLQAHGARATLICQKTPSIRNWF
ARPPGEQITPPLRKVRSPCPLLTLSSERTAERRLENGDSGAAGDCDCITGLYPAAKRSRG
PAAVCCPNQEPPHAGTERSEAWGKADLQVEDQRPVPATQADKENSSPEGADWLSAMSQKL
RKGVGKPSSTPRSTSAPKRQDGRIPTSPEMSSPSWAMRLPKSIKKISS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgctccattgttgacagaggagtctgtaaacgaaggtgtaatgacctcagc
ccaaaatacaatttgtcctctctgctggacggctaccagtgtgcccgtcatgatgaacac
atcacatacgggaatgtgggggtcgccttctctacagccccgggactgcagggcgtcctt
gctgtggccagtgagacgggagtcctgaggctgtacaacacagagaaccgacagagtcca
cttctgaaagaatggttggcacatggtaatgctatctgtgaccttgcttgggtgccaggg
gaggctagcttggtgaccgcgtcaggtgatcagatggccaagctgtgggatgtgacatca
ggggagctccttggtagcttcaaggggcaccagtgcagcctcaagtctgttgcattcaca
cggcaggagaaagctgtgttctgtactgggggccgagatgggaatattatggtctgggac
acaaggtacagcaaaaaagatggcttctataggcaggtaaagcagatcagtggagctcac
aataaaatggacagaaacacaccctctaagacgaagaagaaacgccccggcatggacccc
tctgtggactcccagcagagtgtcacagtggttctgttccaggatgaacacacactcatc
tcctcaggtgccgttgatgggataatcaagatgtgggacctccggaaaaactacacagtg
taccaccatgaccccacccccctccaggcgtacccatacccagggactagcacacagaag
ctaggttactcagggctggtgttggactccactggctccaacctgttctccaactgcact
gacaacaacatctacatgttcaatgtcggcgggctgaaaaccactccagtggcagtcttc
ggtggtcacctcaactcctcgtttgacgtgaagtccactgttagccccgacaaccagttc
ctggctagtggctcaagtgaccatcatgcgtacatttggaagatcgccgacccaaaacag
cctcccatgatgcttcagggccaccgccagcaagtgacctccatagcatggtgccccaca
gatttcacaaagatcgcttcctgctctgatgacgacgccgtacggatctggcgtctggac
cggggtacggatagagcaaagtcttctgtcggaaaggacaatctggtgggctgggcatgt
cctaaacctgccaccaccatgcccagtccaatgcctttgaaccaggcggagtgcacccca
gccaagagtccccggccaaggcgtctgggggccctggcctccccccagcctgctgcctgc
gcccccagaggagcagacctgcctctcgcctccaacaccaccgccgcctccccccttcag
gcccatggcgccagggccaccctcatatgtcagaaaacgccctctatcaggaactggttt
gcccggcctcccggagaacagatcacccctcctctccgcaaggtgcgtagcccctgtccc
ctccttaccctttcctcggagaggacggccgagcgccggctggagaatggtgacagtggg
gcggcgggggactgtgactgcatcacagggctctaccccgcagccaagaggagccgggga
ccagcagcagtgtgctgccctaaccaggagccacctcatgcgggcacagagaggagcgag
gcctggggaaaagcagacctccaggtggaggaccagaggcctgtcccagccacacaggca
gacaaggagaacagctctccagaaggggcagactggttgtcagcaatgagccagaagctg
aggaaaggtgtgggaaaacccagcagcactcccagaagcaccagtgcccccaagaggcaa
gatggcaggataccgacctcaccggaaatgtcctctccctcctgggcaatgcgcttaccg
aaatccattaagaaaatatcttcctag
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