Salmo salar (Atlantic salmon): 106571249
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Entry
106571249 CDS
T04363
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106571249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106571249
03021 Transcription machinery [BR:
sasa03021
]
106571249
03036 Chromosome and associated proteins [BR:
sasa03036
]
106571249
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
ARID
106571249
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106571249
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106571249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
106571249
NCBI-ProteinID:
XP_013999529
UniProt:
A0A1S3M948
LinkDB
All DBs
Position
ssa15:complement(25991275..26076390)
Genome browser
AA seq
2201 aa
AA seq
DB search
MAAQVATAPTSNGKKRSSLTSSVSQDFKSAKSGVVGGAVLGVGNGTIVHAINVERNHHEL
NPNRARVFPVNNNSSQREKESGDSRSESFSTSNCNMSSGSMETGTLVSHKVKNVGVGDPP
PSHHHTPPQQQSQQPFNQFIQHQQRQIHNSQQSIHGESGNRQHGGKENVVLGNQVERHQQ
QQMLNKSEEEDQPSKTEDRINSRYDHASLGPPTNNINPSQSGNSSVSELNSYYGKGRGGP
CFDQHGGQQSPGSGIMHSVQQNNMDQLQQNSHEGYQNNPYNHYPNYRPGYGNSGYGMMSP
SRHGNNMMGPISNTAAANHSRAAMAAASSSGGANIGGFHRFPGQSQQHPSGATPTLNQLL
TSPSPMMRGYGSGYQDYTNPSAQQQQSSMGLTKDLSSQYGSTTHSWGGQERNHPVMSPGN
NGQGSGRSQVPPIDAMAMKRSQLYGMGNNPYSQQQQGGGGSYPGQPYGSPSPHRYPMGMP
GRAQMGVSGMQYPQQQQQMAAQYRQQQGGMGGYCQPQGQPPYSSPPQQQPAAPTQPPYMQ
TRPPPQQEVSQEGSVNRGQSAMTPGKPNHEEMGLSQQDRPSSLPDLSGSIDDLPTGTEVA
ISSAVSASGSTSSQGEQSNPAQSPFSPHMSPRLRSGPSPSPVGSPVGSSQSRSGPISPAS
VPGTQMAPQTPGNMSDVGSHSTLSQSPMSQERGFPPAMQRNTTVPQQSGQGPAMSPGGSM
HPQSTYHQQQLQGGPGPSYGPQTGQYGPQGNYPRPPNYGGTPSANYSGPGPGMSNSLGMN
ASSPMHGQGPGQPCGSMPAGRGLGLGASGRPYLGANTNTVAPTSPSMPQPAGQGQGMRLP
LPSVNQDVGLGPGTNAMQGPNAGPNPSAQGRQGMTPMPHHPGMSPRGMASSPGGPYSQQP
GANTSGRMTPQGPQPLYNAPSGLMHMGGEGMVCPTDPKRRPPEQYKESNTPGPAAVPPPK
PKKTSPATMTNEKIRILYEMGVEPERRVWVDRYLAFMEERGTPVPMLPAVGRKPLDLCRL
YLCVREIGGLAMVNKSKKWRELSTHLNVGTSSSSASSLKKQYIQYLFAYECRVERGEEPP
LEIPGETKKQAKIQPPSPANSGSLQGPPTPQSTGSSSMTEMSEGMKLPTPTTTPHGHMTP
QPGNRNSVGIRVQDPFSEVSDPAFHKRGPMPSGAPYQQVGGSADPSMRMQYDTNKDPYEG
PRKGPGGSEPYRPGQMPSGAMQDMYPPGPPSGAMPGMGPGPRSQYPYGPGYDRRPDHVMG
SEGGVPPPGGQNNMVPSSGDPSMYSANRYPHQRPPGHEGYGQQYPHGPMPYGSHQPGMYP
QQGYKRPVGQEGMYGPPAKRHEGEAYDMQKYGGQQQDMHRQYGGGYMGPEHRPMQGQYPY
SYSRDRMGAIQGPQQHGMMSGGPPFPPGASAEGPQANMWHPRTDMGYPGPYPGRQGQGPP
YPVMGRGPGDDPEGRALQDGQWRQSPYPCPSSSSMASRQPPSSYQSNPAMANHIARAPSP
FARPMGGSGPLSPNNGGHYMASLKKAGMPGSMPGSHNGGMTGQSILPLHRDISFPTGSVE
ATLPKLKVRRRLTSKETGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVSSFTLS
QLPGFLELIVEYFRRSLISIFGILDEYEVGTEGQKMLLGPITDQEEELSVAELDSQLDEE
QRDSRPEETGPEKTTANGSTEEAVPEEKEEPVEVTLKEMVEGEEKEGAATEQSQPSEPRP
KQASKYDKLPVKVEEDQVEEDQVEEDQVEEDQELSLPRGFTSGLLHWKAGGGDSTAHIQT
HFERRGEETNSKPTERKDQVEEKTEMTEEERKAVVEKSMNETATMDDMLSAWPGSLSERN
GLPGTQTQSPIFTLLEDEPRCWDEAPLSTAEPWQDALARRCVCISNIVRGLSFIPGNDND
MSCHPGLVLILGRLVLLHHLHPQRRKTPPSYQREEEQGRACSKDEWWWDCLSALRENTLV
TLANISGQLDLSLYPESICLPILDGLLHWMVCPSAEAQDPFTTAGCSSSLTPQRLVLECL
CKLSIQDNNVDLLLATPPFSRQEKLYATLVHHVGERKSQVCREMAVAVLSNLAQGDPTAA
RAIALQKGSVGILIGFLEDCVAMCQHQQGPHSLLHPAPHPQPPSINMMCRAAKALLAMAK
ENRTELVLYESRLLDISLSSVLSSAVAAIMCEVLFKIGRSS
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacaagtggcaacagccccaacatcaaatggtaagaaaaggtcgagtttaact
agcagcgtgagtcaagattttaaatctgccaaatctggagtagttggtggagctgtactt
ggggtaggaaacgggactatcgttcatgctattaatgtagaacgcaatcaccatgaattg
aacccaaacagagctcgagtttttcctgtaaacaacaattcgagtcaacgtgagaaggaa
agtggagattctagatcggagtctttttcgacttcaaattgtaacatgagttcgggaagc
atggagacgggaacgcttgtcagtcataaagtgaaaaatgttggtgtcggagatcctcct
ccatcgcatcaccacacacctccacagcaacagtcgcaacagccattcaatcaattcatt
cagcaccaacaacgccaaattcacaacagccagcagtcgatacatggagaaagtggaaac
cgccaacatggaggaaaagagaacgttgttttagggaatcaagtggaacgccatcagcag
caacaaatgctaaataaaagtgaggaggaggaccaaccgagcaaaacggaggaccggatt
aacagcaggtacgaccatgccagtttgggaccaccaactaataacatcaacccgtcccaa
agtgggaacagctcagtttcggagttaaatagttattatggaaagggaagaggagggcct
tgctttgatcaacatggcggacaacaaagcccagggtctgggataatgcattcggtacaa
cagaacaatatggatcaacttcaacaaaactcccacgaaggataccaaaacaacccgtac
aatcactacccgaactaccgacctggctacggtaacagtggctatgggatgatgagtccc
tctcggcacgggaacaacatgatgggcccaatcagcaacacggctgctgctaatcatagc
agagctgccatggctgctgcctcttcttctggtggtgctaatattggagggtttcacaga
tttccagggcaaagtcagcagcatccgtcgggggctaccccgactctaaaccagttactg
acatccccgagccctatgatgcggggatatggcagtggctatcaagattacactaatcct
tctgctcaacaacaacaatcaagcatggggctgactaaagacttgagctcccaatacggt
tcaacaactcatagttggggaggacaagaaagaaatcaccctgtcatgagccctggaaac
aacggacaaggaagcggcagatcacaggtgccaccaatagacgccatggcgatgaagcgc
tctcagctctacggcatgggcaacaacccttactcccagcaacagcagggcgggggcggc
tcctaccctggccaaccatacggatcaccttctcctcaccgctacccaatgggaatgcct
gggagggctcagatgggcgtgagtggaatgcagtatcctcaacagcagcagcagatggca
gctcagtataggcagcagcaggggggcatgggggggtactgccagccacaaggccagccc
ccgtactccagccctccccagcagcagcctgcagcccccacacagcccccctacatgcag
acacgtccaccgccacagcaggaggtgtcacaggagggctctgtcaacaggggccagtct
gctatgacccctgggaagcccaaccatgaggagatgggcctcagccagcaggacagaccc
tccagtctacctgacctgtctgggtctatagatgaccttcccacgggcacagaggtggct
atcagctcagcggtcagtgcttcggggtccaccagcagccagggcgagcagagtaacccg
gcccaatcacccttctcaccccacatgtcccctcgcctgcgtagcggcccctccccctcc
ccggtggggtcacccgtgggttccagccaatcgcgctccggaccgatctcccccgccagc
gtcccaggtacccagatggccccacaaacccctgggaacatgtctgatgtgggttcccat
tccaccctgagccagtcccccatgtctcaggagagagggttcccacctgccatgcagcgg
aacaccacagtcccccagcagtcgggtcagggacccgccatgtcccccgggggctccatg
cacccccagagcacctaccaccagcagcagctgcaggggggccccggcccctcgtacgga
ccccagaccggccagtacggcccccaaggtaactaccccaggccccctaactacggcggg
acccccagcgccaactacagcggccccggccctggcatgagcaacagcctgggcatgaat
gccagtagccccatgcacggccagggccctgggcagccctgtggctccatgcccgccggg
cgaggcctgggtctgggggccagcgggcgaccctatctcggtgccaataccaacaccgtg
gcccccacctctcccagcatgccgcagcctgccggacagggccagggcatgagactgccc
ctgcccagtgttaaccaggatgtaggtctgggcccaggcaccaacgctatgcaggggcct
aacgctggtcccaacccttctgcacagggcaggcagggaatgacccccatgcctcaccat
ccaggcatgagccccagagggatggcctccagccctggtggcccctacagccagcagcca
ggggccaacacctctgggaggatgaccccacaggggccccaacctctctacaacgcaccc
tcagggctcatgcatatgggaggagaggggatggtgtgtcccactgaccccaaacggaga
cctccagaacagtacaaggagagcaatactcctggtcctgccgccgtgcccccacctaaa
cccaagaagaccagcccggccaccatgaccaatgagaagattcgcatcctgtacgagatg
ggcgtggagcccgagaggcgggtgtgggtggaccgttacctggccttcatggaggagagg
ggcacacccgtacccatgctgccagccgtgggcaggaagcccctggatctgtgccgcctc
tacctgtgtgttcgagaaataggaggcctggccatggtgaacaagagcaagaagtggagg
gagctgtccacccatctcaacgtgggcacgtccagcagctctgccagctctctgaagaag
cagtacatccagtacctgtttgcctatgagtgcagggtggagcggggagaggagccgcca
ctggagatccccggggaaaccaagaaacaggctaagatccagccgccctcaccggccaac
tctggctccctgcagggtccccccaccccccagtctacaggtagcagctccatgactgag
atgtcagaaggcatgaagcttcccactcccaccaccacaccacacggacacatgaccccc
cagccaggcaacaggaacagtgttggtatccgtgtccaggatcccttctcagaggtcagt
gaccctgccttccacaagcgagggcccatgccctctggtgccccctaccagcaggttggc
ggtagtgcagacccctccatgaggatgcagtacgacaccaacaaggacccctatgaaggg
ccccggaaggggccagggggcagtgagccctatagaccaggtcagatgcccagcggtgcc
atgcaggacatgtacccacctggtcctccctcaggagccatgccgggtatgggccccggc
ccgcggtcacagtacccctacgggcctggctacgacaggagaccagaccatgtgatgggt
tcggaggggggtgtgcctccccctgggggtcagaacaacatggtaccttccagcggtgac
ccaagcatgtactctgccaaccgatacccccatcagcggcctcctggacatgaaggttat
gggcagcagtaccctcacggccccatgccctatggctctcaccagcctgggatgtaccca
caacagggctataagaggccagtgggacaagaggggatgtacggtccccctgctaagcgc
catgagggtgaagcctacgacatgcagaagtacggagggcagcagcaagacatgcaccgc
cagtatggagggggctacatggggccggagcacaggcccatgcagggccagtacccttac
tcctacagccgagaccgcatgggagccatccaggggccccaacaacatggcatgatgagc
ggaggccctcccttcccccccggagcctctgcagagggccctcaggccaacatgtggcac
cccaggacagacatgggctaccctgggccctaccccggccgacagggccaggggccacct
taccctgttatgggccggggtccgggggatgacccagagggaagggccctccaggacggc
caatggcgccagtccccatacccatgcccctcttcctcctccatggcttcccgacagccc
ccctcctcctaccagtctaaccctgccatggccaaccacatcgctagagcccccagcccc
ttcgcccggcccatggggggatccggacccctttcccccaacaacgggggccactacatg
gcctctctgaagaaggcagggatgcccgggtccatgccaggctcacacaatggggggatg
acagggcagagcattctacctctccacagagatatcagcttccccacggggtctgtggag
gccaccctgcccaaactcaaggtccgacgcagacttacttccaaggagaccggaacccca
gaggcgtggcgtgtgatgatgtctctgaagtcaggtctgctggctgagagcacgtgggcg
ctggacaccatcaacatcctactgtatgacgacagcaccgtgtcctccttcaccctgtca
cagctgcctggcttcctggagctgatagtggagtactttcgccggagtctgatctccatc
tttgggatcctggatgagtacgaggtgggcaccgagggccagaagatgctgctcggacca
atcacagaccaggaagaggagctttccgttgcagagcttgacagccagttagacgaagaa
cagagggacagcaggccagaagagactgggccagagaagaccacagccaacggcagcaca
gaggaggcggtcccagaggagaaggaagagcctgtggaggtgactttgaaagagatggta
gagggggaggaaaaggagggggctgccactgaacaatcccagccctcagagcccaggccc
aaacaggccagtaagtacgacaagctgcctgtgaaggtggaggaggaccaggtggaggag
gaccaggtggaggaggaccaggtggaggaggaccaggagctcagtctgcccagggggttc
acctctggcctgctgcactggaaggctggaggaggggactccacggcccacatccagaca
cactttgaaagacgtggcgaggagaccaacagtaagcctacagaaaggaaagatcaggta
gaggagaaaacagaaatgacagaggaggagaggaaggctgttgtagagaagagcatgaat
gagacagccactatggatgatatgctgagtgcctggccaggttctctgtcagagaggaac
ggtcttcccgggacgcagacccagagccctatcttcaccctgctggaggacgagcctcgc
tgctgggacgaggcgcccctctccacggccgaaccctggcaggacgccctggcccgccgc
tgcgtttgcatctccaacatcgtccgcggcctctccttcatcccggggaatgacaacgac
atgtcctgccaccctggcctggtgctgatcctggggcggctggtcctgctgcaccacctg
cacccccagaggaggaagacgccccccagctaccagagagaggaggagcagggccgggcc
tgcagcaaggatgagtggtggtgggactgtttgtcagccctcagggagaacaccctggtc
accctggctaacatctcaggtcaactagacctgtccctctacccagagagcatctgtctg
cccatcctggacgggctgctccactggatggtgtgtccctctgctgaggcccaggacccc
ttcaccacggcgggctgctcctcctccctcaccccccagagactagtgctggagtgcctg
tgcaagctgagcatccaggacaacaacgtggacctcctgctggccacgccgccgttcagc
cgccaggagaagctctacgccaccctggtgcaccacgtgggtgagcggaagtcccaagtg
tgccgggagatggcggtggctgtgctctctaacctggcgcagggggacccaactgcggcg
cgcgccatcgccctgcagaagggcagcgtggggatactcatcggcttcctggaggactgc
gtggccatgtgccagcaccagcagggaccccacagcctgttacacccagcaccacacccc
caaccccccagcattaacatgatgtgcagggccgccaaggctctgctggccatggccaag
gagaaccggacagagttggttctctacgagagcaggctactggatatctccctgtcctct
gtgctgagctcagccgtggcggccatcatgtgtgaagtactgtttaagattggacgctcc
tcgtga
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integrated database retrieval system
