Salmo salar (Atlantic salmon): 106571488
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Entry
106571488 CDS
T04363
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K07610
desmin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106571488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106571488
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
106571488
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF3450
DUF724
DUF5638
DUF5595
DUF1796
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
106571488
NCBI-ProteinID:
XP_014000125
UniProt:
A0A1S3MAM5
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Position
ssa15:38003280..38007602
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AA seq
529 aa
AA seq
DB search
MSRSPERMSSYRRHFEDALASSASYQVQVSSPSPIRRDVRHRSASYSRSGGTMGRRNTSS
NRKSRMTSSVSMGALCFGMNMGLGPSLDLDAAAAENQEFMSTRTGERQEMVALNDRLAIY
IEKVRTLEGQNKLLEAEIDALKNRYMKPSGLRQLYEGQLRELHRIAEQMRVQRDLAVAAK
GAMAGQVEVLKVKYEEALEARKNAELEIEAFRPDVDRATSARIGLEKQLENLEVELAFLT
RVHKEEIEELMQQIYVAVAKVDMTFALPDLSSALKQIQSQYDSIAARNLQEMDAWYKSKF
QDLNNVTTKHVQSVRSVREEIASYKKDSLNLERELESMKTRNESLEVQIRDAVARHKKEE
ETLRERIEGLKLELMVMKEKIALLLREYQELLNVKMALEIEITTYRALIEGEDTRLSTMV
QGMSLGGGRVGVAISASSTSASVSAASVSGYGAGLGRAPGNGYGGTKEAPGGAVISPESQ
TESFEEQSVEMTERKTLLIRTVKTDDMYESDTQERTITISRAADVTDED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagcccagaaaggatgtcttcttaccgccgccacttcgaggacgcccttgcc
tcctctgcttcctaccaggtgcaggtttcgagcccttcaccgatccgaagggatgtacgt
caccgctctgccagctacagtcgcagcggtggaaccatggggaggaggaacacctccagc
aaccgcaaatcccgtatgaccagcagtgtgagtatgggggccctgtgtttcggaatgaac
atgggcctggggcccagcctggacctggatgcagctgcagcggagaaccaagaattcatg
agcacccgcaccggcgagaggcaggagatggtggccctcaacgaccgcctggctatctac
atcgagaaggtgcgtactctggaggggcagaacaagctgctggaggctgagattgatgct
ctgaagaaccgctatatgaagccgtctgggctgagacagctctacgagggacagctgaga
gagctccaccggatcgcggagcagatgagagtgcagagggacctggctgtagcggccaag
ggggccatggcaggacaggtggaggtgctcaaggtcaaatatgaggaggctctggaggcc
aggaagaatgcagagttggagatcgaagccttccgccccgatgtggatagagccacctcg
gcccgtatcggcctggagaaacagctggagaacctggaggtggagctggccttcctgacc
agagttcacaaagaggaaattgaggaactgatgcagcagatctacgtggcggtggcgaag
gtggacatgacctttgcccttcctgacctctcctccgccctcaaacaaatccagtcccag
tacgacagcatcgctgccagaaacctacaggagatggacgcttggtacaagtcaaagttc
caggacctgaacaatgtgacaaccaaacacgttcaaagcgttcgaagtgtgagagaggaa
atcgcaagttacaagaaagatagcttaaacctggagcgtgagttggagtctatgaaaacg
agaaatgagtctctggaggtccagattcgtgacgctgtggcgagacacaagaaagaagag
gagacactgcgtgagcgtattgaggggctgaagctggagctgatggtgatgaaggagaag
atagctctgctgctgagagagtaccaggagctgctcaacgtcaagatggccctggagatt
gagatcaccacctacagggcgctgatcgagggcgaggacacccgtctcagcaccatggta
cagggcatgtccctgggtggaggaagagtaggtgtggccatcagcgctagctccacctct
gcctcggttagcgccgcctctgtcagcggatacggggccgggctgggcagagcccctggt
aatggatacggaggcaccaaagaggcccctggcggggcggtgatatcaccagagagccag
acggagagcttcgaggaacagtcagtggagatgactgagcggaagactcttctcatcaga
acagttaagacagatgacatgtatgagagcgacacacaggaacgcaccattaccatctct
agagctgctgatgtcacagacgaggactag
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