Salmo salar (Atlantic salmon): 106571570
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Entry
106571570 CDS
T04363
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106571570
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106571570
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
Ig_2
LRR_14
fn3
LRR_9
Sp38
LRR_Zer-1
V-set
C2-set_2
LRR_EndoS
Ig_DSCAM-DSCAML_C
C2-set_3
DHU1_N
Motif
Other DBs
NCBI-GeneID:
106571570
NCBI-ProteinID:
XP_014000254
UniProt:
A0A1S3MB40
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Position
ssa15:47990452..48011162
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AA seq
819 aa
AA seq
DB search
METLLVYLMVLGMAVKAHKVQLCPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKQRDFANMTKLQDLTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLHHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESTPWVAIQRMTSLHTLG
LDHNMLSYIPIGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSMGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSSSSRAVVHSDGTLDILITTVKDSGSFTC
VASNPAGEAQQTVDLVIVKLPHITNGTVKKEPNPGSSDIATVMRTGGGGEGGGMVPLGNT
KTSQEKKVVITEATSTSVMVRFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPSSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTEPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIIFLIVRYRVCNQGDEDKALEMGEIPSLSSDGQLQGCGVPKAMSKSLSK
QILQPEKPEKEDKESLRLALSPRKPVKQQQPPAPTTTSTKPSIPDCTVSTSAASHSWHPA
SPVTLRQKRADITATGDLKPGEARRAEGQTDVELENTNRNNSSEAKMAAALAVPVPARST
KWTPVARRPRPPGASSHHYMTVPAGGVRVNRRHSLNVDSYKERCYVSLVQQQPKPGGSLC
SKRSLSMSGEMPTLESAMANIRRGRDKLSRSEWLLESTL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgctagtttacctgatggtccttggcatggctgtaaaggcccacaaggtc
cagttgtgcccaaaacgctgtgtctgccaaatgctcaaccccaacctggcaaccctctgc
gacaagaagggcctcctcttcgtcccgccaaacatcgaccggcacaccgtcgagatgcgt
ctgggcgacaacttcgtcacgagcatcaaacagcgggactttgccaacatgaccaagctt
caggacctgacgttgtctcggaacaccatcggttccatctcgcctcacgcctttaaagat
ctggagaacctcagggccttgcacttggacagcaaccgtctgacgaggctcaccaacgac
accttcagcgggatgtccaaacttcaccatctcattcttaacaacaaccaactgattcat
atccacattggggccttcaatgatctcacggctctagaggagttagatctgtcctacaac
aacttagaaagcaccccctgggtggctatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacatccctataggaaccttctccggcctgcagaagctc
aaacggcttgacgtcacctccaacaagctccagaagcttccgccagaccctgtgttccag
cgggctggggttctggccacgtcaggaagcatgggtccgtcgtcattcgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctatggctgaggaggctaaggcgggag
gatgatctggagacgtgtgcggctccgcagcacctggctggacggtacttctggaccgtg
tctgaagaagagttcctctgtgagccgcctctcatcaccagacactcccaggagctgcga
gcactggagggtcagagtgtagctctgcgctgtaaggccaggggcgacccggaccccatc
atccactggattgcgccagacggccgactcatgtccagttcctcccgggctgtggtgcac
agtgacgggactctggacatcctcatcaccactgtgaaggactcaggctccttcacctgt
gttgcttccaacccggccggggaggctcaacaaactgtggacctggtgatcgtcaaactc
ccacacatcaccaacggtactgtgaagaaggaaccgaacccaggttcttctgatatcgcc
acggtaatgaggacgggtggtggtggggaaggcggaggcatggtgccactgggaaacacg
aagacgagccaggagaagaaggtggtgatcactgaggcaacgtctacctccgtcatggtc
aggttcaacttccagaggagtataccgggcatccgaatgttccagatccagtacaacgga
acctacgatgactctctggtttacagaatgatcccttcgagtagtaagagtatcctggtg
aacaacctggcggccggtacacagtacgacctgtgtgtgctggccatctacgatgacctg
gtgacctccctgactgccacacgagtggtggggtgtgtccgcttcaccaccgagccacag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatc
ggagggatcatcgtggcgtccgtcttagctttcatcatcttcctcatcgtgaggtaccga
gtgtgtaaccaaggcgatgaggataaggctttggagatgggtgagatcccatctctgagc
agtgatggtcagttgcagggctgtggcgtccccaaggccatgtccaaatctctgtccaag
cagatcctccagccagagaaaccagagaaggaggacaaggagtctctgaggttggccctt
tctcctcgtaaaccggtcaagcagcagcaacccccagccccaaccaccacatctaccaag
ccctccatccccgactgcactgtctctacctccgcagccagccactcctggcaccctgcc
tccccggtcaccctgaggcaaaaacgggccgatatcactgccaccggggatctgaaaccc
ggagaagcccgccgagccgaaggccagacagatgtggagttagagaacacaaaccgcaat
aactcgtcggaagctaaaatggctgccgccttggccgtacctgttcctgcccgttccaca
aaatggacgccggtcgctaggcggccgcgcccccctggagcctcctcccaccattacatg
acggtaccagcagggggtgtgagggtgaaccggcggcactcgctgaacgtggactcgtac
aaggagcgctgctacgtcagcctggtacagcagcagccaaaacctggcgggagtttgtgc
tccaaacgcagtctgtccatgagcggagaaatgcccacgttggagagtgcaatggcaaac
atacgcagaggcagagacaagctgtcccgatctgagtggcttctcgaaagcactctatga
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