Salmo salar (Atlantic salmon): 106571586
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Entry
106571586 CDS
T04363
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106571586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106571586
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
hnRNP proteins
106571586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
Zeta_toxin
CPT
Motif
Other DBs
NCBI-GeneID:
106571586
NCBI-ProteinID:
XP_014000301
UniProt:
A0A1S3MBG6
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All DBs
Position
ssa15:complement(46266717..46276658)
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AA seq
836 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRQLSDKGLKAELMDRLQAALDEEALAGDSPLGPEAAEGGF
PEGDDDTTAAAADDQEDMGEDEEDEGPVAESMDANEEEENGNGEGDAAVVDQCEEEENAA
QEDDEMGEVEEEEMDPMLKEGVDDMEKITLDAEDGEPGDHPAEGDADKDTNADQKNKKGV
KRRREEHGRGYFEFIEENKYSWPSLKSPLPPLEEEDEEFDDTTVCLDNYNCDLHFKVSRD
RYSASSLTMESFAYLWSGGRASYGLSRGKACYEMKITEKIPVKHISSKNMDIHEVQVGWS
LATGSLLLGEEEHSYAYSGKGKKTTNCVTEDFEETYDENDVICCLINFEGEEVEMSFSKN
GNEPVVAFQASKESLAGKALFPHVICHNCAVEFNFGQMDTPYFPQPEGYTFLQQVAMDDR
VRGPKAPDTKKDCEVIAMVGLPGSGKSTWVNKHIQENPGKYYILGSDTIVEKMMIGSLKR
QAKDTTKLTAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGYQRKAV
VVCPSDDDYKERAQKKAESDGKDVPEHALLKMKGFFTLPEEGESFAEVSYAELQKEDAAK
LVEQYKEESKAALPAEKKPNQGSLTPKRGGGGVRGGGRGKNQFNRGGGPGQRGGGRGGFQ
QRGNFRGAPGPRGGFTRPPRGFMPPPAFRGGFSNRPNFNRGGALMAPQGGAPRGGPMRGH
RGGAMNRGGPPMSRGGGGHMSRGGGGHMSRGGGGHRGNFNQGFQPRAGNSRGNYGNKNGS
SGFGGGRNGGGRGGGFGDNRTGGGFGMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaacgtaaaaaaactgaaagtaaacgagttgaaggacgagctgaaaaag
cgtcagctgtcggacaaggggttgaaggccgagttgatggaccggttgcaggccgcgctt
gacgaagaggccctggctggagattctccccttgggccggaggccgcggagggaggcttt
cccgagggagacgacgataccaccgccgccgctgctgatgaccaagaggacatgggggaa
gatgaagaagacgagggccccgtcgctgaaagcatggacgccaacgaggaggaagagaat
ggaaacggagagggagacgccgctgtcgtggaccaatgcgaggaggaagagaacgcggcc
caggaggacgacgaaatgggcgaggtagaagaggaagaaatggatccaatgctgaaggaa
ggtgtggacgacatggagaaaattacattggacgcagaggatggtgagcctggagaccat
ccagcagagggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgtt
aagagacgccgggaggaacatggaaggggctactttgaatttattgaagagaacaaatac
agctggcctagtctcaagtctccactgccacccctggaggaggaagatgaggagtttgat
gatacaacagtctgcctggacaactataactgcgacctgcacttcaaggtgtcccgggac
cgctacagcgcctcctctctcaccatggagagctttgcctacctgtggtccgggggcaga
gcctcatacgggctgtcccggggcaaggcctgctacgagatgaagataactgagaagatc
ccagtgaaacacatatccagtaagaacatggacatccatgaggtccaggttggatggtcc
ctagctactggcagtctgctccttggtgaggaggagcattcctatgcctactctggcaaa
ggcaagaaaaccaccaattgcgtgactgaagatttcgaggagacgtatgatgagaatgac
gtcatctgctgcctcatcaactttgaaggtgaggaggtggagatgtccttttctaagaat
ggtaatgagccagtggtggccttccaggccagtaaggagtccctagcagggaaagcgctc
ttcccccacgtcatctgccacaattgtgcagtggagttcaactttggccagatggacacg
ccctacttcccccagccagagggctacaccttcctgcagcaggtcgccatggatgaccgt
gtccgcggacccaaggcacctgacactaagaaggactgcgaggtgattgccatggtgggc
ctgcctggctcaggaaagagcacctgggtcaacaagcacatccaggagaaccctgggaag
tattacatcctgggcagcgacaccatcgtggagaagatgatgattggcagcttgaagcgt
caggcgaaggacacaacaaagctcacagccatttcccagcgtgcacctctcttcctgggc
aagttcattgagatcgctgctcgcaagaagaggaactatatcctggaccacaccaacctg
tctgccccgggccaaaagaggaagatgtgtctatttgctgggtaccagcggaaggctgtt
gtggtctgtccctcagacgacgactacaaggagagggcccagaagaaggccgagagcgac
gggaaagacgtgcccgagcacgctctcctgaaaatgaaaggattcttcaccctgccagag
gaaggcgagagcttcgctgaggtgagctacgctgagctgcagaaggaggatgctgccaag
ctggtggagcagtacaaggaggagagcaaggcggccctgccggctgagaagaagcccaac
caggggtctttgacccccaagagaggaggagggggtgtccgggggggaggcagaggcaag
aaccagttcaaccgcggaggtggacccggccagagaggaggtggacgaggtggcttccag
cagagaggcaacttccgaggagctccaggcccacgtggcgggttcactcgcccccctcga
gggttcatgccccctccagccttcagaggtggattctccaaccgtcccaacttcaacagg
ggcggcgccctcatggccccccagggaggggccccaagaggaggaccgatgaggggccac
aggggtggagccatgaacagaggtggtcctccaatgagccgaggaggcggcggtcacatg
agccgaggaggcggcggtcacatgagccgaggaggcggcggtcacaggggcaacttcaac
caggggttccagcccagagcaggcaacagccgtgggaattatggcaacaagaatggcagc
agtgggtttgggggcggcaggaatggtggaggacgtggcggcggatttggagacaacagg
actggtggaggattcggcatggacaaggctcaggccttcaaccagagctggcagcaaggg
ttttggaaccagaagccatggagccagcagtatcagccaggatactattaa
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