Salmo salar (Atlantic salmon): 106571670
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Entry
106571670 CDS
T04363
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106571670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106571670
Spliceosome [BR:
sasa03041
]
Complex A
U1 snRNP components
U1 related factors
106571670
Complex B
106571670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
106571670
NCBI-ProteinID:
XP_014000476
UniProt:
A0A1S3MBZ3
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Position
ssa15:42401662..42418125
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AA seq
866 aa
AA seq
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MSFPPHLNRTLLPPGIPPPQFAGFPSGTPMIPVHMGIMTQTPAVLVPTSMPAAPRKEAAL
VKAKETDENSGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQGKNRTA
FGFCEYKEPESTLRALRLLHELQIGVKKLLVKVDAKTKAQLDEFKAKKKSSTNGNGAKAE
GGKEEEAEEEEEEVIDEDTKRRDQVVKGAIDGLIREYASELNAASNEESPHRRKKKEKKE
EEDINAIGGLEDDKRDLISREISKFRDTHKKLEEEKDKKEKERAEFDRERRERDKERERE
RERRDREREKEREKERERERERERERERDRERDRGDRDRERDRNRTKEREWERERSRDRS
KDRSHSREVSRDRDKDKKRDQEDEEEVYERRRLERKLRDKEAAYQERLKNWEIRERKKAR
DYSKESEREEERRREMTKESKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETEVDE
RDRKREKEELEEIRQRLLAEGHPDPEAEIRRMEEEAERLRQPPVKPEPDPEEERVHKAPR
VDRDRRGDRDRDRGDRERGRGDRERGDRERGRGERDRERGERDRGDHHVPHHHHPHSDDD
VEEGEEEFDDDDQSGSKPCLKPTLRPITAAPSVSSASGGATPNTPCGGDESPCGIIIPHE
NSPPHETPPQEEFRPKIGLSLKLGATSSPSQPNVAIKRKKLTVDSVFNKFDDEEADEAPR
KRKLVPLDYGDDDKNLQSVVDGASGLAAIKGANTEEKRKHIKSLIEKIPTGKTELFSYPL
DWSAVDSTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHGTPQGILDDVAMVLDE
EAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctcctcatctcaaccgaacccttttgccaccgggcatcccccctccacag
tttgctggttttccttcaggtaccccaatgataccagtccacatgggtattatgacccaa
acccccgcggtcttggtgcccacctccatgcctgcggcacccaggaaggaggccgccctg
gtgaaggccaaggagacggacgagaacagtggccccaccactactgtgtttgtagggaac
atctcagagaaagcctcggacatgctgattcgacagctgctggcgaaatgtggcctggtc
ctaagctggaagagagtccaaggagcctctggaaaacttcaaggtaaaaacagaacagct
tttgggttctgtgagtacaaggagcctgagtcaacgctacgggccctgcggctgctccac
gagctgcagatcggggtgaaaaagctgctggtgaaagtggacgccaagaccaaggcccag
ctggatgagttcaaggccaagaagaagagcagcaccaacggcaatggggcaaaggcagag
ggtggaaaagaggaggaggcagaggaagaggaggaggaggtgatcgacgaggacaccaag
aggcgggatcaggtcgtcaagggcgccatcgacggtctgatccgcgagtatgccagcgag
ctcaatgctgcctcgaatgaagagtccccccaccgcaggaagaaaaaagagaagaaagaa
gaggaggatatcaacgcaattggtggattggaggatgacaagagagacctgatttctaga
gagatcagtaaattccgcgacacccacaagaaactggaggaggagaaggacaagaaagag
aaggagcgtgcagagtttgatcgcgagcgacgggagagggacaaggagagggaacgtgaa
agggagcgccgggaccgcgagcgggagaaggagcgcgagaaggagagggagcgggagagg
gagcgggagcgtgagcgcgagagagaccgcgaacgggacagaggtgaccgagaccgcgaa
cgggatcgcaaccggacgaaagagcgagagtgggaaagggagaggagccgcgacaggagc
aaggaccgcagccactccagagaggtgagtcgcgacagagacaaggacaagaagcgtgac
caggaggatgaggaggaggtctacgagcggagaaggctggagaggaaactccgagacaag
gaggcagcctatcaagagcgtctgaaaaactgggagatccgcgagaggaagaaggctcga
gactactccaaggagtctgagcgggaggaagagcgcaggagagagatgactaaagaaagc
aaacggctgaaggagttcctggaggactatgatgacgacagagatgaccctaagtactac
aggggcagcgcactgcagaagcgtctgagagaccgggagaaggagactgaggtggatgag
cgcgacaggaagagagagaaggaagagctggaggagatcagacaaaggctgctggccgag
ggacacccagaccccgaagccgagatacgcaggatggaagaagaggcggagcgtctgcgc
cagcctccggtgaagccagagcccgaccctgaggaggagcgggtacacaaggccccacgg
gtggaccgggatcgccgaggagacagggatcgagaccgaggtgatcgggagagagggaga
ggtgatcgagaacgaggtgatcgggagagagggaggggggaaagagaccgggagagaggg
gagagggacagaggggaccaccatgtaccccaccatcaccacccccactctgatgatgat
gtggaagagggggaggaggagtttgatgacgatgaccaatcggggtccaagccctgcctg
aagcccacgctgcggccaatcacggcggctccctctgtttcgtcggccagcgggggcgcc
acccccaacacgccttgtggcggggatgagtcgccctgcggcatcatcatcccccacgag
aactcgccccctcacgagaccccgccccaggaggagttccgccccaagatcggcctcagt
ctcaaactgggagccactagcagccccagccagcccaacgtggccatcaaacgcaagaag
ctcactgtggacagcgtctttaacaaattcgacgacgaggaggcagacgaggctccccgc
aagcgcaagctggtgccactggactacggcgatgacgacaagaacctccagagtgtggta
gacggcgcctcgggcctggcggccatcaagggcgccaacacagaggagaagcgcaagcac
atcaagagcctgattgagaagatccccacgggcaagacagagctgttctcctacccgctg
gactggtctgccgtggactcgactctgatggatcgacgcatacgcccctggatcaacaaa
aagatcattgagtacattggagaagaggaggctacactagtcgattttgtctgctcaaag
gtgatggctcatggtacaccacagggtatcttggatgatgttgccatggttttggatgaa
gaagcagaggtcttcattgttaagatgtggaggttgctgatctacgaaacggaagccaag
aagattgggctggtgaaataa
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