Salmo salar (Atlantic salmon): 106571744
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Entry
106571744 CDS
T04363
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
106571744
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
106571744
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GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
106571744
NCBI-ProteinID:
XP_014000622
UniProt:
A0A1S3MBR8
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Position
ssa15:49034505..49056736
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AA seq
672 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQLVEHDGTLWKRTVSVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMNPTESHLDIDDGQFGFHNGSVCM
DSGWLTCQTEIRLRLHFSKTSPVSITKKKYKKSRFRIKLTLEGVEEDDEDEEPAQSAASW
HKMTTTLETSMISEDGYKSRHSQPECGYALEASQWTEYIIHTMEPDNLELTFDFFEEDMG
EHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMNL
FLDIILSCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRCR
TTQIAMSFAQSENILGVSAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQADIFKVEEQHTLQETLKSFVCSCYSIPCQAPVCAAAAASKVHN
GSTESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacacta
caactggttgaacacgatgggacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtttcaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgaaccccaca
gaatcgcaccttgatattgacgacggccaatttggattccacaacggctccgtgtgtatg
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcacttctccaagacg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtagaggaggatgatgaagatgaagagccggcgcagagtgcagcgtcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtgaagatgggtacaagtcccgc
cactcccagcctgagtgtggctatgccctggaggcctcacagtggacagagtacatcatc
cacaccatggagcccgacaacctagaactcaccttcgacttctttgaggaggacatgggc
gagcatgtgatgccaggggacgcccacccagggacggcgggtacggcctgcctcctctcc
tcattctttgtggagagtggcaaggacacgggtgtggtcactttgcccatcatgaaacgc
aactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctattgag
ggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgccccc
ctggacgttggccacagaggggccggcagcacacacgcagccaaacataccaaagtcagg
gagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggagttt
gacgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgcatc
tccactaagaagaaaggagacaagcactctttggagctgtttgaagttccggtcaaagat
ctcacatacgaccagctgcagcagctgaagctgggccatgcttctgccttgaaggtgaac
gaccacaaagacgacgacgacgaggaagaggttgatgaacaccagcccttcccttcattc
tcacagatcttccatgcagtgcctgaaaatgtgggcttcaacatcgagctgaagtggatt
tgtcagatgaaggatggttcgtgggaaggaaacctctcttcctacttcaacatgaacctg
ttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcaccatggttcgtcagaagcagaacaagtaccctatc
ttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgtcgg
accacacagatagccatgagcttcgcgcagagcgaaaacatcctgggtgtcagtgcccac
acagaggagctgcttcagaacctggagcacatccgagaggcccaatctaaaggcctggtg
gtgttctgctggggagacctcaacaacgatcacgacaacaggaccaagctacgggagcag
ggcatcgacggcctcatctatgacaggatctgtgacgaccaggttgagcaggccgacatc
ttcaaagtagaggagcagcacactctgcaggagactctcaagagctttgtgtgttcctgc
tactccatcccctgccaggcgcctgtctgcgccgccgctgccgcctccaaggttcacaac
ggcagtacagagtccgactcaggcctcagctcttcctga
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