Salmo salar (Atlantic salmon): 106571746
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Entry
106571746 CDS
T04363
Name
(RefSeq) GDNF-inducible zinc finger protein 1-like
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106571746
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
106571746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-C2H2_PRDM15
C2CH-3rd_BIRD-IDD
zf-C2H2_8
zf-met
DUF7128
Zn_ribbon_8
C1_4
Motif
Other DBs
NCBI-GeneID:
106571746
NCBI-ProteinID:
XP_014000630
UniProt:
A0A1S3MCF4
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Position
ssa15:complement(49070873..49077211)
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AA seq
872 aa
AA seq
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MSDQVVQLSSAFHHEDMLQSLHQLRLHGHLCDVTVQVDFQGELEEFEAHQAVLAASSGYF
KNILLAPDPPKKLFLGNVRTTDFTRFLEYVYTGKLEVDKEFAKDKIGVIYEVATLLECKS
LVQACISVLDEGSLSLHRVETSMSQDMEAGLDDVGEEDGALWVGVNKVPKIAPTKRLTPP
TKPERGEKRAKVTVTAEEERSEANKDTEVSGRRSNRLAGRRVFIDIPKKKYVRKMKDQTK
AQMEDLPDNTQTTSQEENTDNTQEAEEALPELLPEKEGAGLESTDVDDEDEVEEGDAPED
CPDDSLFLPSKEEEGEEEGEERTTNRPSRRIDTQYKCDKCQRTFHYEKSYLKHIKTSHSV
QGEVTYRCDTCQQTFANRCNLKIHQRHVHSDERLFPCDVCTKTFKRKKDVTRHRRQVHEG
GGERHTCLVCNKALSSKTALTLHERTHTGDKPYSCTDCEAKFSQSSALKTHRRTHTGEKP
FACDQCDARFTQNHMLSYHKRAHTGEKPFMCESCGKSFASKEYLKHHSRIHTGSRPYKCE
QCGRAFAQRNSLHQHMKIHTGERPYHCTDCDKQFTQLNALQRHQRIHTGEKPYMCGLCNR
TFTDKSTVRRHTMTHDQNTPWKNYLVVLKDNMEKKTKKPRSLGRKVKIETVVREVEGDSG
VGGRLQEGTILVPGDPITLSASWGDPGTIALVSHTTLGGFTVIQTEMPAGTQLPMVTTDG
TGASVISLDGSTVSVPFTIPVSMSSISVSSSSTGVLPVQTVSVSVPVTVSGAIFAPVSET
TLSTPCVLETAVSQTILAPDLEAGPGSDMTAITDPEEAVSECAPISECVTVQTSELETET
QSAAVSNEEQHSVPEDIGTVEDLEVSTEDTVV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagtggtccagctctcctcagccttccaccatgaggacatgcttcagtct
ctgcaccagctcagactgcatggccacctgtgtgatgtcacagtccaggtggacttccag
ggtgagctggaagagtttgaggctcaccaggcggtcctagctgcctccagcggctacttc
aagaacatcctactggccccggacccacccaagaaactattcttggggaacgttcgaacc
actgatttcaccaggttcttggaatatgtatacacaggcaaactggaggttgataaagag
tttgctaaagacaagattggtgtaatatatgaagtggcgacactgttggagtgtaagagc
cttgtccaggcttgcatctcggttctcgatgaaggcagcttgagtctgcacagggttgaa
acatccatgtcacaagacatggaagctggtttggatgatgtaggggaggaggatggggcg
ctgtgggtcggagtcaacaaagttcccaaaatagcccccaccaagaggctgacccctcca
acaaaaccagagagaggggagaaaagggcaaaggtcacggtcacagccgaggaggagagg
tcagaggcgaataaagacactgaggtctctgggaggaggagtaacaggctggcagggcgc
agagtcttcattgacattcctaagaagaagtacgtgaggaagatgaaggaccagaccaag
gcgcagatggaagatctgcctgacaacactcagacaaccagtcaggaggagaacactgac
aacacacaggaggcagaagaggcccttccagagctgctgcctgaaaaagagggggcggga
ctggagtcaacagacgtcgatgatgaagatgaggtggaagagggagatgcaccagaggat
tgtccagatgactccctcttcttgcccagcaaggaagaggagggtgaggaggagggagag
gagcgtaccaccaacagaccatccagacgtattgacactcaatacaagtgtgacaaatgt
caacggaccttccactatgagaagagctacctgaagcacatcaagacgagccacagtgtg
cagggggaggtgacgtaccgttgtgacacctgccagcagaccttcgccaaccgctgcaac
ctgaagatccaccagagacacgtccacagtgacgagagactgttcccctgtgacgtctgc
accaagaccttcaaacgcaagaaggacgtgacgcgccaccgacgacaggtgcatgaggga
ggcggtgagcggcacacctgtcttgtgtgtaacaaggctttgagctctaagacagcgttg
acgctacatgagagaacacacacaggagacaagccctactcctgcactgactgtgaggcc
aagttctcccagagctcagccctcaagacacaccgcaggactcacacaggagagaagcct
tttgcctgtgaccagtgtgatgcgaggttcacccagaaccacatgttgtcctatcacaaa
agggcccacacaggagagaagccttttatgtgtgagagctgtgggaaaagctttgcctct
aaagaatacctgaaacatcactccagaatccacacaggctccaggccttacaagtgtgaa
caatgtggtcgagccttcgcccagagaaactccctccaccagcatatgaagatacacaca
ggtgagcgtccgtaccactgtacagattgtgataagcagttcacccagctgaatgccctc
cagaggcaccagaggattcatacaggggagaagccctacatgtgtggcctctgcaaccgt
accttcacggacaagtcaactgtacggagacacacaatgactcacgaccaaaacactccg
tggaagaactacctggtggtcctcaaggacaacatggagaaaaagactaagaaacccaga
agcctcggtagaaaggttaaaatcgagacggtggttcgggaggtggaaggggatagtgga
gttggaggtaggctccaggaggggaccatattggttcccggcgatcccatcactctctca
gccagctggggcgacccagggaccatcgccctggtcagccacaccaccctgggtgggttc
acggtcatccagacagagatgccggccgggacccagctacccatggtcaccacagacggc
accggggccagcgtcatctctctggacggatccactgtctctgtcccttttactatccct
gtctctatgtcctccatctctgtgtcctcgtcctccactggtgtcctccctgtccagact
gtgtctgtctctgtcccagtcactgtttcaggggccatatttgccccagtttcagagacc
actctttcgactccgtgtgttctggaaactgcggtgtcgcagaccatcttggctccagat
ttggaggctgggcctggttcagatatgacggccattacggatcctgaggaggcagtttca
gagtgtgcccctatctctgagtgtgttacagtgcagacatcagaactggagactgagaca
cagagcgctgctgtctcgaatgaggaacaacacagtgtaccagaggacattggtactgtg
gaagacctggaggtgtccactgaagacactgtggtgtag
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