Salmo salar (Atlantic salmon): 106571923
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Entry
106571923 CDS
T04363
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106571923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106571923
03036 Chromosome and associated proteins [BR:
sasa03036
]
106571923
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106571923
Coactivators
SAGA/TFTC/STAGA complex
106571923
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106571923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
106571923
NCBI-ProteinID:
XP_014000966
LinkDB
All DBs
Position
ssa15:60447613..60458235
Genome browser
AA seq
957 aa
AA seq
DB search
MRLTIECSRVKMAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGSGRGNSAVRVQAAA
NHSGNPAVCGNSNVQDSKMGLSQELAKPGNSVQGGVINSTRSTMDTAAATTAAGSSMTAG
HSQSKTRTAGGVVTVVPDHGERIGKTESAGVQTLNGSSVVINSHNLVSSASSTVPAVTIV
YNGPGSVVKGNVILPSTSSTVIQTSLMDNAVTSTVISSQPSVLNSVPTVTLVRPPMQTPG
AVTSLSGSNTFLTSSVNVAHPACSGAQINKSESPKTTIQKTAQVTGTATALEKSPSTIAI
SPGGIRAIAPQVLAPRLPQPQQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQ
SQSPMTPRPATPTSTPPVQITSVQAPGMPLMARQVTPTIIKQGTPAQTTVLQRPPVLQQN
TIVLGGAAATPGQAPVQPGSAAAAVNQRAGTPGATGTPSTPTTETLENVKKCKNFLSTLI
KLASSGKQSSETTASVKDLVKSLLEGKIEAEEFTSRLYRELNSSPQPYLVPFLKRSLPAL
RQMTPDSTAFIQQSQLPQASVQPASSSTALTAVVLGGTATAQRLPLNRTTTASPGAKGTM
HQSPVISQAQTPHSKPGLMVPQQQGALASTQVTLAQSPMVTFRGQSHSRIIMGHPQVVKQ
LQTVPVVKQALAPGAKVTLGRQSMLSVAQKNKLKEASGGTFKDDDDINDVASMAGVNLSE
ESARILATNSELVGAVTRSCKDEAFLYTTSLTRRVQEIGRRFGVIDLGPEVINYVSHATQ
QRLQNLLEKVTEVAQQKNITFKEDDKYEQVSDVRAQLKFYEQLDQMEKQRKEEQEREILM
KAAKSRSRQEDPEQLRLKQKAKEMQQQELNQIRQKEANMTALAAIGPRKKRKMESPVNGA
GAEGSGSGPSSSVGANSGGSRPQRQRITRVNLRDLLFCLENERETSSSHLLYKGFLK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgatcgagtgtagtagggtaaagatggcggcgggctcggatttgctggat
gatgttttcttcaacactgaggtggacgagaaagtagttagtgatcttgttggatctttg
gagtctgagctcacgggatcgggtcgcggaaactctgcagtcagggtccaggctgccgca
aatcacagtggcaaccccgctgtatgtggcaattccaatgtccaggacagcaaaatggga
ctttcacaagagcttgctaaaccagggaatagcgtccaagggggtgtcattaatagtacg
aggtccaccatggatacagcggccgcgacgacggcggcgggctcaagcatgacagcggga
cacagtcagagtaagacgaggacagctggtggtgtggtaacagtggttcccgatcacggg
gaaaggatcggaaaaactgagtcggctggtgtacaaactttaaatggaagtagcgttgta
ataaactctcataatttggtgagctcggcaagcagcacagtgcccgccgtcacgattgtc
tacaacggaccaggctccgtggtcaagggaaacgtaatcttaccctcaacttccagcact
gtcattcaaacctctctaatggacaatgctgtcacttcaactgtaatatcgtctcagccg
tctgttctaaacagtgtgcctactgtcacgctcgtgaggccgcctatgcaaacccccgga
gcagtcacctcgctgagcgggagcaatacctttctgacatcatctgtcaacgtcgctcac
cctgcatgttcaggagcacaaatcaacaagtcagagtcgccaaaaacgacaatacaaaag
actgcacaggtgacggggacggcaacagctttagagaaaagcccatcgactattgcaatc
agtcctggtgggataagggcgatcgctcctcaggtattggccccaagacttccgcaaccc
caacagaacgcgccaaacatccaaaacattcagctccccccagggatggtgttggtgcgc
agtgagagtgggcagctgttaatgatccaccagcagaccctggcccagatgcaggctcag
tcccagagccccatgaccccacggccagccacccccaccagcactccccctgtccagatc
acctctgtacaggctccagggatgcccctcatggcccgtcaggtgacccccaccatcatc
aagcagggcaccccggcccagaccactgtcctccagaggcctcctgtgctacagcagaac
accattgtgctgggtggggcggctgccaccccaggtcaggccccagtgcagcctggctcg
gcagcagcagcagtcaaccagcgagcagggacccccggagctaccgggacaccaagcact
cccactacggagaccctggagaacgtgaagaaatgcaagaacttcctttccacgctgatc
aagctggcatccagcgggaagcagtcgtctgagaccacggccagcgtcaaggacctggtc
aagagcctgttggaaggtaagatcgaagcagaggagttcaccagtcggttataccgggag
ctcaactcctctcctcagccatatcttgtgcctttcctcaagaggagtctccctgcactg
cgtcagatgaccccagactcgacagccttcatccagcagagccagcttccccaggccagc
gtccagcctgcctcctcctccacagccctgactgcagtggtgctggggggcacggccacc
gcacagagactccctctgaacagaaccaccacggccagccccggggccaaggggaccatg
caccagtcccctgtcatcagccaggcccagacacctcacagcaagcctggcctgatggtg
ccccagcagcagggggcgttggcaagtactcaggtaactctggcccagtcgcccatggtt
actttccgaggccagtcccacagtcgcatcatcatgggacatccgcaggtggtcaaacag
ctgcaaacagttcctgtagtgaaacaagctctagcaccaggggccaaggtaacactgggg
cgccagtctatgctctctgttgcacagaagaacaagctgaaggaggcaagcggaggaacc
ttcaaagatgatgatgatatcaatgacgtggcctccatggctggagtcaacctgtcagag
gagagcgcccgtatcctggcaaccaactctgagctggtgggcgcggtgacccgctcctgt
aaggacgaggccttcctctacaccacctcactaacccggagagtacaggagatcggtagg
aggtttggggtgattgacctggggccagaggttatcaactacgtttcccatgcaacacag
cagcggctgcagaacctgctggagaaagtgacggaggtggcgcagcagaaaaacatcacc
ttcaaggaggatgataagtatgaacaggtgagtgacgtgcgagcccagctgaagttctat
gaacagctggatcagatggagaaacagaggaaggaggagcaggagagggagatcctgatg
aaggctgctaagtctcgatcgcggcaagaggacccagagcagcttcggctcaaacagaag
gccaaagagatgcagcagcaggagctgaatcagatcaggcagaaggaggccaacatgacg
gccctggcagccatcggccccaggaagaaacggaaaatggagtcccccgtcaacggagcc
ggggctgagggttctggctctggtccctcatcgtcagttggggccaatagcggaggctcc
agacctcagcgccagcgcatcaccagggtcaacctcagggacctgctcttctgtctggag
aatgagagagaaaccagtagctcacatctgctctacaaaggcttcctcaaataa
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