Salmo salar (Atlantic salmon): 106571924
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Entry
106571924 CDS
T04363
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecule (CAM) interaction
sasa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106571924
04519 Cadherin signaling
106571924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106571924
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106571924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_pro
Ig_CLSTN
F59B103_C
NCMAP
DUF2304
Motif
Other DBs
NCBI-GeneID:
106571924
NCBI-ProteinID:
XP_014000970
UniProt:
A0A1S3MD20
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All DBs
Position
ssa15:complement(60478582..60678653)
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AA seq
866 aa
AA seq
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MENEGVVFQSGDARFSVGTDGSIYTQREVAGLSGPVQFTVTASGPHTHVWETTVKLALMG
QPTPSPPGDQIRVEQGKEGERKEEEGVKAPPEFQAPPTVIMFPRQWEMSSKGLRRQKRDW
VIPPINVPENSRGPFPQMLVSIRSDQDRNISIRYSITGVGADQPPNEVFSIDPVAGKMFV
TKPLDRERRSSYHLRAHAVNMNGERVESPIDLYIYVIDMNDNRPEFKNQVYNGSVDEGSK
PGTFVMHLAAFDNDDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREK
VSQYSIIVQATDMEGNLNFGLSNTATAIISVTDINDNPPELTSRTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWNAVYRIISGDPIGHFTIITDQHTNDGMVTVVKPVDFEQNRAFMLT
VVVNNQAPLASGIQSSLQSTSGVTISVVDINEPPYFPTNPKSIRFEEGVPAGTSLTTFSA
SDPDRFMQQSIRYSKLADPADWLSINNTNGQIITTATLDRESIYVKNNIYEATFLAVDNG
SPMASGTGTLQIYLIDVNDNAPSLLPRESQICERINRNAGINITAADTDTDPNVGPFVFE
LPTFPASIRRNWTVSRLNGDYARLSLRTQYLEPGVYEVPVIVTDSGNPPLSNRSIIKVKV
CPCDENGDCTLVGAVAAAGLGTGAIIAILVCIIILLSMVLVFVLWMKRREKERQTKQLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDERPIIPESQY
PIRPVVPHPGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTVGSVSSLNSSSTGD
QDYDYLNDWGPRFKKLADMYGGGDDE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagggggtggtctttcagagcggtgacgccaggttcagcgttgggaccgat
gggtcaatctacacccagagagaggtggcaggcctgagcggaccggtccagttcacggtc
actgccagcggtccacacacacacgtgtgggagacaacggtcaaactggccctgatgggg
caacccacaccctcaccgccaggcgatcagatcagagtggaacaggggaaagaaggagaa
aggaaggaggaagagggggtcaaagcaccaccagagttccaggccccacccaccgtcatc
atgtttcccaggcaatgggagatgagctccaagggactgcggagacagaagagagactgg
gtcattccgccaatcaacgtgcctgaaaactccagagggcccttcccgcagatgctcgtc
agcatccgttcggaccaggaccgtaacatctccatccggtacagcatcacgggggtggga
gcggaccagccacccaatgaggtgttcagtatcgaccctgttgccgggaagatgttcgtc
accaaacccctggaccgagagaggagatcatcttaccatcttcgtgcccatgcagtgaac
atgaatggtgagcgggtggagagccccatagacctgtacatctatgtcatagacatgaac
gacaaccggcctgaattcaagaaccaggtctacaacggctctgtggatgagggctccaaa
ccaggtacatttgtgatgcacctggcagccttcgataatgacgacaacaccacggcaaat
gggatggtgcgctaccggatcctgtcccagacgccacacagtcccatccccaacatgttc
accatcaacagcgagactggagatatcgtcaccgtggcagcaggcctcgaccgcgagaaa
gtgtcccagtacagcatcatagtccaggccacggacatggagggcaacctaaactttggc
ctgtccaacacggccactgccatcatctctgtcacagacatcaacgacaaccccccggag
ctcacctccagaaccttttcaggggaggtcccagagaaccgggtcaatgttgtggtcgcc
aacctgaccgtgattgaccgggaccagccacactcgcccaactggaatgctgtgtacagg
atcatcagcggagacccaataggtcacttcaccatcatcaccgaccaacacaccaacgac
ggcatggttaccgtagtgaagccggtggactttgagcagaacagggccttcatgttgacg
gtggtggtcaacaaccaggccccgctggcaagtgggatccagtcgtccctccagtccaca
tctggggtcaccatctccgtggtagacatcaacgaaccgccctacttccctactaacccc
aagtccatccgctttgaggagggcgtccccgctggcacctctctcaccacattctcagcc
agcgaccctgaccgtttcatgcagcagagcatcaggtattctaagctggctgacccagct
gactggctgtccatcaacaacaccaacggtcagatcatcaccacggcaaccctggacaga
gagtccatctacgtcaaaaacaacatttatgaagccaccttccttgcagttgacaatggc
tctcccatggccagtggtacagggaccctccagatctatctgatagatgtgaatgacaac
gctccgtctctgctgccccgcgagtctcagatctgtgagcgcatcaaccgtaacgccggc
atcaacatcacggctgcagacacagacacggaccccaacgtaggccctttcgtcttcgag
ctgcccacgttccctgctagcatacgacgcaactggacagtgtcacgtctcaacggtgac
tatgcccggttaagtttacggacccagtatctggagccgggggtgtatgaggtgcctgtg
attgtgaccgattcggggaaccctcccctctccaacaggtccattatcaaggtcaaggtg
tgtccgtgtgatgagaacggagactgcacccttgtcggggctgtggctgccgctggactt
gggactggagccatcatagccattctcgtctgtatcatcatactgctcagtatggtgcta
gtgtttgtactgtggatgaagcgcagagagaaggagagacagaccaaacagctgctgatc
gacccagaggacgatgtcagagataacatcctgaaatacgatgaggagggagggggagag
gaggaccaggactatgacctgagccagctgcagcagcctgactccttggagcacatcatc
agtaagcccccaggagtacggagggtggacgagcgccccatcatccctgagtcccagtac
cccattcgaccggtggtcccccaccctggggacatcggggacttcatcaatgagggtctg
cgggcggcagacaatgaccccacggcccctccctatgactccctcctggtgtttgactac
gagggcagcggctctacggtcggctccgtcagctccctcaactcctccagcacaggggac
caggactacgactacctcaacgactggggcccccgcttcaagaagctagccgacatgtac
gggggaggggacgatgaatag
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