Salmo salar (Atlantic salmon): 106571981
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Entry
106571981 CDS
T04363
Symbol
SFRS6
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106571981 (SFRS6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106571981 (SFRS6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106571981 (SFRS6)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106571981 (SFRS6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106571981
NCBI-ProteinID:
XP_014001087
UniProt:
A0A1S3MD31
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All DBs
Position
ssa15:62623501..62627023
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AA seq
335 aa
AA seq
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MPRVYVGKLSYHAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIRL
VEEKSRRRRSYSGSRSRSRSRRRSRSRSSRSRTNSRSRSHSRSKRRRSRSGRKSRSRKSR
SRSRTRKSRSRSDKSKSRSKSHSKVKSERDSSSPSKEKLASKKSRSRSATPMGNGKEEPS
SRSPSPAADRRSKSPDKRSVSRSPSRSRSRSASRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgtctatgttggaaaactaagttatcatgctcgagagaaagaccttcagcgg
tttttcaatggctacggaaagctcatggaaattgatctgaaaaatggatatggctttgta
gagtttgaggacaatcgcgatgcggatgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggaccgcggcgcgaccgagatggatac
agtggtggcgggggtggtcgaagtagtagtggttacagcagcagcagaagccgcactggc
agggataagtacgggccacctgtccgtaccgagtaccggctgatcgttgagaatctgtcc
agccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtac
gctgacgcccacaaggagcgtaccaacgagggtgtcatcgagtttggctcgcgttcggac
atgaggagggccctggacaagctggacggcacggacatcaacgggaggaagatccgcctg
gtggaggaaaagtctcgccgccgccgctcctactctggcagccgctccaggtctcgcagc
agacgtcgctctcgtagcaggagcagccgctccaggactaactccaggtcccgatcccat
tctcgcagcaagagacgtcgctctagatctggaaggaagtcccgttcccgcaagtctcgt
tcccgctctcgcacccgcaaatccagatcccgctccgacaaaagcaagtcccgttccaag
agccattccaaggtgaaatctgagcgggactccagcagcccctccaaggagaagttggcc
agcaagaagtcccgtagccgctcggcgacccccatggggaatgggaaggaggagccgtcc
tctcgctccccgtccccagcagctgaccgtcgctccaagtctccggacaagcgatctgtc
tcccgctccccatctcgctccaggtctagatcagcttcccgagattaa
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