Salmo salar (Atlantic salmon): 106572028
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Entry
106572028 CDS
T04363
Symbol
trim33
Name
(RefSeq) tripartite motif containing 33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sasa01001
]
106572028 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106572028 (trim33)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106572028 (trim33)
Protein kinases [BR:
sasa01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
106572028 (trim33)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106572028 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
106572028
NCBI-ProteinID:
XP_014001208
UniProt:
A0A1S3MDC5
LinkDB
All DBs
Position
ssa15:complement(75365702..75392100)
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AA seq
1208 aa
AA seq
DB search
MADNKGEEDMENASKLNSEPRGEDSGDPELKDVNSVIVIEPDSKEGDDLQSQENVSQMPT
PANVSGGGDASSNSAGAGGAGSTSSSPVGNTNGGTTESSGAGDIAGTSPTFTTEMSPPPT
VPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVPGPNG
QPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSAQMCTSCEDNADTIGF
CAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGASGQRPVFCPIHKQEPLKLFC
ETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMAKLQEKKTYVHYSHAHVTSRL
KEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIANLARQ
ILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPTFWAK
NVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQQAFA
QQKQQQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPSMVQQQPPRLISMQAQ
QRGPMNGGPLMYPPHHLRLAPGQGRMPSPSAQPRMPNGQQYPPMMQPQLQRQLTIDSEMS
HHRFRLLHLTGHSNPGHAGPFPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIE
LIPSVTNPENLPCLPDIPPIQLEDAGSSSLDALLSRWISASTYPQLGLWPPVDMNPSPGL
STHSPGSSGLSNSHTPVRPSSTSSTGSRGSCGSAGRPVPASAPMEQQVKVKQEPGIEKEC
GFSGTTTSNVKTERGKDGGRSACMMSSPEISRTPPLPVLGSVASASSVQDALKTLGEHVK
TEPQDQEACSGANGPSNAPSTSPSTKASDAPLTNSKGAGPATLRTPRTAMGTNQGGAGGK
DDDPNEDWCAVCNNGGELLCCDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEY
EPDDEPRGEKDTSEQGLSPEDQRRCERLLLNVFCHELSEGFQEPVPPSIPNYYKIIKKPM
DLTLVKQKLQLKHVQHYQSPIEFVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSE
VAQAGKAVSLYFEERLLELYPDESFPEVPEEPEAPVGEEADLTEDSEDEFVQPKRKRLKT
DEKMLHIK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagaacgcttccaaattaaattcagaacca
cggggagaggatagcggggaccccgaattgaaagatgtgaattcggtgattgtcatagag
cccgattcgaaagaaggagatgatttacaatcccaagagaatgtttctcagatgcctaca
cccgctaacgtcagtggaggaggggacgctagcagcaacagcgcgggcgcagggggggca
ggcagcacaagcagcagcccagttgggaacaccaatgggggtacaaccgagtcctcgggt
gctggggacattgctggaacctcaccaacattcacaaccgaaatgtccccaccgccgacg
gttccaccagccaaccccgtcaccccaataaaccttatggatacgtgcgctgtgtgtaaa
caaagtctccagacccgtgattgtgaacccaaactcttaccgtgtctacactcattttgc
ttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgcccgggccgaacgga
cagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgtcaagactgcaaa
cagagcgacatcattgacaactactttgtcaaggacactaccgaggcctccaacacttca
gatgaaaaatctgcacagatgtgcaccagttgtgaggacaacgcagataccatagggttc
tgtgcagaatgtggagagtggttgtgcaagacctgcatcgaggctcaccagagggtcaaa
atcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggagtctgtaggtgcg
tcgggtcagagacctgtgttctgtcccattcacaaacaggagcccctgaaactcttttgt
gaaacctgtgacacactcacctgtcgggactgccaactgctggagcacaaggagcacagg
taccaatttctggaggaggccttccagaaccagaaaggcttcattgagacacacatggcc
aaactgcaggagaaaaagacctatgtccactactctcacgctcacgtgacaagcaggcta
aaggaagttactgagacccataggaaggtggagcatgagatcaagatagccgtgtttact
cttatcaacgaaatcaacaagaagggcaagtgtttactgcagcagcttgagagtgtgact
aaggagaggagcatgaagctgttttcccagcagacagacatcgccaacctggccaggcag
atcctccacgtgctcaacttcacccactctgccattaacagcggcagcagcaccgccctg
ctttacagcaagaggctgatcatctaccagctgcgcaaggttctgaaggctggactggaa
ccagtgcctcaggctaatggttctgttcgcttcttctgtgaccccacattttgggctaag
aatgtggtcaacctagtagggaacctggtgattgagaagatgccccaggctcagcaccct
cccaacattatggtggggcccatctccccgggccacggccacccaggccacggaaaacac
ccagggcagatcaacctggctcagctccggctgcagcacatgcagcagcaagccttcgcc
cagcagaaacaacagcagcagcagcagcaccaacaaccacaccagcaacaacagcagcac
caacagaggatccaggagcagatgcgtattgcttcccaaatgtcccagcagcaccccagg
cagggtggaccttcgatggtacagcaacagcccccgcgcctcatcagcatgcaggcccag
cagaggggccccatgaacggcggtcccctcatgtaccccccccaccacctgcgcctggcc
ccgggacagggccgcatgcccagccccagcgcccagccacgcatgcccaacggccagcag
tacccccccatgatgcaaccccagctgcagagacagctgactatagattctgagatgagc
caccacaggtttcgtttgttacatctaacagggcattctaacccaggtcatgctggaccc
ttcccagtggcctctctccacaacgtgagcgccgccaaccccaccagtcccaccagtgcc
agcatggctagcgcccatgcccaccgtggccccgccagccccatagtgggcgccattgag
ctcataccctctgtcaccaacccagagaacctgccctgcctaccagacatccctcccatt
cagctggaagacgcaggctccagcagtctggacgccctcctgagtcgctggatctcagcc
agtacataccctcagctgggcttgtggccccccgtggacatgaacccctcccccggactc
tccacacactcacctggctcctcaggcttatcaaactcccacacgcccgtgcggccatcc
agtacttccagcacaggaagcaggggcagctgtggctctgccgggaggccagtgccagcg
agcgccccaatggaacagcaggtcaaagtcaagcaggagcccggaatcgagaaggagtgt
ggcttctcaggaaccaccacctccaacgtcaaaacggaacgagggaaggatggagggagg
agcgcgtgcatgatgagtagtccagagatcagccggactccccctctccccgtgctgggc
tccgtggcttccgcctcctctgtccaggacgccctcaagacgttgggggagcacgtcaaa
actgagccccaggaccaggaggcctgcagcggggccaacgggcctagcaatgcccctagc
accagcccatccactaaggcctcagatgccccgttgaccaacagcaagggagccgggcct
gctaccctgcgaactccacgcactgcaatggggaccaaccagggtggggcgggagggaag
gatgatgaccccaacgaggactggtgcgccgtgtgcaacaacgggggagagctgctttgc
tgtgaccgctgccccaaagtcttccacatcacctgtcacatccccaccttgaagtgctcc
ccgagtggagagtggatgtgcacgttctgccggagtctggccagcccggagatggagtac
gagcctgatgacgagcctcgtggcgagaaggacaccagtgagcagggcctgagtcctgag
gaccagaggaggtgtgagcgtctcctgctgaacgttttctgccatgagctcagcgagggg
ttccaggagcctgtccctccctctatccctaattactacaaaatcatcaagaagcccatg
gacttgaccctggtgaaacagaagctacagttgaagcacgtccagcactaccagagcccc
atagagtttgtctcggacgtgcgcctggtcttcagcaactgtgccaaatacaacgagatg
tctcgaataatccaggtatatgatgaggagaaacagagtaatgtgcaggcggactcagag
gtggcgcaggcagggaaagccgtgagtttgtactttgaggagaggctgctggagctatac
ccagacgaaagtttccccgaggtaccagaggagcctgaggccccagttggagaggaggca
gatctcacagaagactcagaggatgagtttgtgcagcctaaacgcaagcggttaaaaaca
gatgaaaagatgcttcacatcaagtga
DBGET
integrated database retrieval system
