Salmo salar (Atlantic salmon): 106572050
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Entry
106572050 CDS
T04363
Symbol
ube4b
Name
(RefSeq) ubiquitination factor E4B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106572050 (ube4b)
04120 Ubiquitin mediated proteolysis
106572050 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106572050 (ube4b)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106572050 (ube4b)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
U-box type E3
106572050 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
106572050
NCBI-ProteinID:
XP_014001258
UniProt:
A0A1S3MDH3
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All DBs
Position
ssa15:complement(74890469..74942001)
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AA seq
1381 aa
AA seq
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MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPWPLPGTSGATPQPLPPAA
SHSLGLNVQSVTPATSPIGASGVAYCSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSSMSQVDVDSGIENMEVEDSDRREKRDLAEKESAENSDVSEEQALQLICKILRV
SWKEQDRDVIFLPLLAAEFHQSSLKDVFSDFKDLIGQILMEVLLMSTQLHVHNPFASLTA
TSEPIAAAKSLDHHLTLIQPSSQGSSPMAPCAGSFGASSLSSLYGCSPHSLALNAARMIS
PPLPTSPSLHPMVAPSPPSVANPPRLSLNLPSAPLPISQRYRPYSVTSPLGISTSPRLAS
LPGLSRGPITEGLPVPPIILAQAPAPPLPTSPQSVPLPSTSPHPPTSMPLPLVPPSPRSA
ARGAALATRIPSSPLSLLFFALSDMSQDSSDEEPEDEQEEDFTQVQFGSSLGVSGGGMAW
ESCGDRFTIEACKETEMLNYLIERFDSVGMEERKAPKICSHPSVSQLLSNIRSQCISHAV
LVLQGALTQPRSPLQQSLLVPYMLCRNLPYGFIQELARITYQEEEVFRQIFVPILQGLGL
AVKECSFDSDNFKFPLMALAELCEIKFGKTHPMCNLMTSLPLWCPKSLSPGTGREVQRLS
FLGAFFSLSVFAEDDSKVGDKYFSGPAITTENTRVVSQSLQHYLESARGEMFKILHNVLL
NGETREVALNYMAALVNRNVKKAQMQTDDKLVSTDGFMINFLSVLQQLSMKIKLETVDPY
YIFHPHCRLHVSPEETRLKATMEELKTWLAEMYNDPSKFSEPKFPTECFFLTLHTHHLSI
LPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRSKAC
ADAGLLDENLLRRCLQFYSMVIQLILRMVDPAYPHMSLPLNPEIPKSFAALPEFYIEDVA
EFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQLRT
QRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNMGH
HGTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPREQQ
QSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLC
GPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSQELFEEVISK
MTKAGIKSTIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPS
GNIMDRAIILRHLLNSPTDPFNRQPLNESMLESRMCTHTVPELKERIQAWMREKQGQGRF
L
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgacgagatccgcagaaggagactggccagacttgcaggaggg
caaacatcccagcccagcacccccctcagcactcccctgacgtccccacagagagagacc
cccccctggccccttcctgggacctcaggggccacaccccagcccctaccaccagccgcc
tcacattcacttgggctcaatgtccagagtgtcacccccgccacctctcctattggcgca
tctggggtggcgtactgcagtcagagcagcgagggagtgagctccctctccagctctccc
tccaacagcctggagacccagtcccagagtctttcccgatcgcagagcatggacattgac
acagcctcctgtgaaaagagcagcatgtcccaagtggatgtggactcagggatagagaac
atggaggtggaggacagtgatcgcagggagaagagggacctggctgaaaaggaatccgct
gaaaactcagatgtctctgaagagcaggctctgcagctcatctgtaagatcctgcgcgtt
tcctggaaggagcaggacagggacgtcatctttctccccttgctcgccgccgagttccac
cagagcagcctcaaagacgtcttctctgacttcaaagacctgattggccagatcctgatg
gaggtgctcctgatgtccacccagttgcacgtccacaacccctttgccagcctgactgcc
acgtccgagccaatcgctgctgccaaatctcttgaccaccacctgacgctgatccagccc
tccagccagggcagcagtcccatggccccatgtgcaggctcgtttggggccagctcgttg
tccagcctgtacgggtgtagtccgcactcgctggctttgaatgcagccaggatgatctct
ccacctctccccaccagcccatccctgcatccaatggtagccccaagtcccccttccgtg
gccaacccccctaggctctctctcaacctcccttccgcccctctgcccatctcccagcgc
taccggccctactctgtcacctctcccttggggatctccaccagccccagactggctagc
ctccctgggctttcacgtggccctatcactgaaggtctcccggtaccgcccatcattttg
gcccaggccccagccccaccactaccaactagcccccagtcggttcccctcccctccact
agtcctcatccgcccacctccatgcccctccctctggtacccccctcacccagatcagct
gcccgaggagctgccctcgccacccggatcccgtcgagccccctatccctcctgttcttc
gccctttctgatatgtctcaggacagcagcgacgaagagcctgaggatgagcaggaggag
gattttacgcaggtccagtttgggtccagtctgggtgtgtctggagggggaatggcctgg
gaatcctgcggtgaccggttcaccattgaagcgtgcaaggagactgagatgctcaactac
ctcatcgagcgctttgacagtgtgggcatggaggaaaggaaggcgcccaagatttgcagc
caccccagtgtcagccagctcctcagcaacatacgctcgcagtgtatttcccacgccgtt
cttgtccttcagggtgccctcacgcagcccaggagtcctctgcagcagtccttgctggta
ccctacatgctgtgccgtaacctgccgtatgggtttatccaggagctggcccgcattacc
taccaggaggaggaggtcttcagacagatctttgttccaatccttcaagggctgggtctg
gctgtgaaagaatgttccttcgacagtgacaacttcaaattccccctgatggcattagct
gagctatgtgaaatcaagtttgggaagactcaccccatgtgcaatttgatgacgtctctg
cccctgtggtgtcctaagtctctgagcccggggactggccgagaggtccagagactctcc
ttcctgggagccttcttcagcctgtcggtctttgcagaggatgactccaaagttggtgac
aagtacttctcgggccctgcgatcaccacagagaacactcgcgtggtcagccaatccctg
cagcactacctggaatcagcccggggtgaaatgtttaaaatcctccacaacgtcctactg
aacggagagacaagagaggtagctctcaactacatggcagctctggtcaaccgcaatgtg
aagaaagcccagatgcagacggacgacaagctggtgtccacggacggcttcatgatcaac
ttcctgtcggtgctgcagcagctgagcatgaagatcaagctggagacggtggacccctat
tatatcttccacccgcactgccgcctgcatgtcagccccgaggagacccggctcaaggcc
accatggaagagctcaagacctggctggccgagatgtacaacgacccctccaagttctct
gagcccaagttccccacagagtgtttctttctgacgctgcacacccaccacctgtccatc
ctaccgggctgccgacgctacatccgcaggctgagagctatccgcgagctcaacaggacc
gtggaggagctgaagaacagtgagagccagtggaaggactctccgctggccagccgacac
cgagagatgctaaagagatgcaaaacccagctcaagaaactggtgcgctccaaagcctgt
gccgacgcggggcttctggatgagaaccttttacgcagatgtctgcagttctacagtatg
gtcattcagctcatcctacgcatggtggatcccgcctacccacacatgagtctaccgctg
aatccggagattcccaaaagctttgctgctctgccagagttttacattgaagatgtggcc
gagttcctgcttttcgttgtgcagtattcccctcaggtcctgtatgagccctgcgtccag
gacattgtcacttttctggtggtgttcatctgcagtcagaactacatccggaacccctac
ctgatcgccaagctggtggaggtgctttttgtcaccaacccggcggtgcagctgcgcacc
cagcgcttttccgagatgatggagaaccaccccctgtccgtcaaacagttggtcccggcc
ctcatgaagttctacacagatgtggagcacaccggtgccaccagcgagttctacgataag
ttcacgatccgctaccacatcagcaccatcttcaagagcctctggcagaacatgggccac
cacggcacattcctggaggagttcaactctggcaagcagtttgtgcgctacatcaacatg
ttgatcaacgacaccaccttcctgctggacgagagcctggagtccctaaagcgcatccac
gaggtccaggaggagatgaagaacaaggagcagtgggatcagcttcccagggagcagcag
cagagccgccagtcccagctgacccaggacgagcgggtgtcgcgctcctacctggccctg
gccacagagactgttgacatgttccacatccttaccaagcaggtccagaagcccttcctc
cggcccgagctggggcctcgtctggcggccatgctgaactttaacctccagcagctttgc
gggccgaagtgccgggacctgaaggtggagaacccagagaagtatggttttgagcccaaa
aagctcctggaccagcttactgacatttacctgcaacttgactgtgcccgctttgccaag
gccatcgccgacgaccagcggtcgtacagtcaagaactctttgaggaagttatttccaag
atgacgaaagccggcatcaagtctaccatcgccattgaaaaattcaagctactatcggag
aaggtggaggagatagtcgcaaggaactctcagtccgaaatggactacagtgacgcacct
gacgagtttaaagaccctctgatggacaccctaatgaccgaccctgtgatattgccctct
gggaacatcatggaccgagccatcatcctccgccaccttctcaactcccccactgacccc
ttcaacagacagccactcaacgaaagcatgctggagtcacgtatgtgtacacacaccgtc
cctgaactgaaggagaggatccaggcatggatgagagagaagcaaggccagggacgtttc
ctctaa
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