Salmo salar (Atlantic salmon): 106572101
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Entry
106572101 CDS
T04363
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106572101
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106572101
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
EzrA
BRE1
Motif
Other DBs
NCBI-GeneID:
106572101
NCBI-ProteinID:
XP_014001413
UniProt:
A0A1S3MDZ4
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Position
ssa15:71794324..71836950
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AA seq
1797 aa
AA seq
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MHASLVMFISALAYATAREPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPDYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASIFPGVSKGPLRK
VDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYLATGNAGGGVCDHC
LHNTMGRNCEMCKPFYYKDLSRDIRDPGVCTACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAANPRGCQPCQCDPRGTVSESPKCDPVSGDCFCKRLV
TGRSCDQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPTPVCMERGVSYSLRFEFSRYLDGNSILILGTTAANILVDSISLIPRYSSLEMFIGGDP
ASIARKQSYERYRCHEGAKSVTRSQISNVCAKLITSMSAIINNGALPCQCDPQGSVSSVC
DTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVTRSCDQLTGQCPCRPG
AFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCVNGYYGN
PVLGTGMGNQCRPCPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEQCAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCSFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKP
NYWNLASGQGCEACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRIQCR
ACDCDPRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHLCFGDWDRVV
QDLAVRTKTLSERAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNTRNTTAEAVSTLMEL
IEDLRSQIGETTDTLNRLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQLDIL
KNSNFLGAYDSIRSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNTKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCGGLN
CNGAVAMADNALERSKHTEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQAAA
EKAIQRARADIGETEDRLAQIESETSSSEHDLNDAMNRMGNLGREINALKLKRAHNSVAA
ARAEETATMARDKANEAKQILDGELMDKYHTVQELVDTKAKTVEEAKKKAERLRDEAKEL
LKDAQNKLQRLAELEKDYEENQKTLEGKAQQLDGLEDKMKAILNNINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcataagtgccctggcatatgccaccgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaaggcatcatctacatgcggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaaatgtttccagtgtgactctcgccgccca
tatgatcctgactacaacaccatcagtcaccgcattgagaacgtcatcaccacgttcaaa
ccacaccgcaagaagtcatggtggcagtcagagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacgtttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcgatcttccccggggtatccaagggacccctgcgcaaa
gttgacgacgtcatctgtgagtcgcgctactctgacatcgagccgtccacagagggagag
gcgatctacagagttctggaccctgccatccacattgaggatccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgcgtgaacttcaccaagctgcacactctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactacgccatgtacgag
ctggtcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctgaactgtgagctgtgtgatgacttccatagtgacatgccctggagaccggctgag
ggacgcaactccaacgcctgcaagaaatgcaactgtaacggtcactccagccagtgtcac
tttgacatggcggtgtacctggccacgggcaatgccggcggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattttactacaaggacctc
agtagggacatcagagaccccggggtctgtactgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgatgagccgtccctgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaagggcatcgctgtgacaaatgcaagtctggcttcttt
ggcctgagtgcagcaaacccccgtggctgccaaccctgccagtgtgaccccaggggtact
gtgtcagagagcccaaaatgtgaccctgtgagcggggactgcttctgcaagcgactggtc
accggacgcagctgtgaccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctcaatggag
aatgggcagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtggtacttcatggctctggaccactatacttatgaggctgagctggccatattggga
cagggctgcagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccc
tactccatggagtacgacctcctaatccgctatgagccacagatgccacgggactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtatccctgcctgcaggttcccggtttgtcgtg
ctgcctacacctgtatgcatggagagaggagtgagctactctcttcgctttgagttcagt
cgctatctggatgggaacagtattctcattcttggtacaaccgctgccaacattcttgtg
gactctatctccctgatccctcgttactcctccctggagatgttcattggcggtgacccc
gcctccatcgctaggaagcagagctacgagcgctaccgctgccacgagggggccaagagc
gtgacacgctcccagatcagcaacgtctgtgccaaactcatcaccagcatgtcagccatc
attaacaatggagccctgccttgccagtgtgacccccagggctcagtcagctcagtgtgt
gacacgcacggaggtcagtgtcgctgtaggccaaacgtgattggacttcgctgtgaccag
tgtgctcctggaacgtacggctttggacctgcaggatgtaaagcatgtgagtgcaatctg
gaaggtgcggtcactcggtcgtgtgaccagttgactgggcagtgcccgtgtcgcccgggt
gcgttcggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cgatgcctgtgtaatggacatgctgaggagtgccaccagaggaccggagcttgtctcaac
tgcagggacaacactggaggggacaaatgtgacaggtgtgtcaacggttactacggcaac
ccagtgttgggcacaggtatgggtaaccaatgtcggccctgcccttgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggggggatggttaagcgctccgagggttctttcaag
cgttcccggtgtgagcagtgcgcccctggttactacggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaataacattgacatgtcagacctggatgcgtgtgac
cggcggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggtgtg
tgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtagc
ttcctgggcacagagcatacccagtgtacagcgcgggatgagtgtgtctgccagcgtgcc
acggggcagtgccagtgtttacccaacaccatcggcctgacatgtgaccactgtaagccc
aactactggaacctggctagtgggcagggctgtgaggcctgcggctgtgaccccaacaac
gctgtcaactcggcctgcaacgagttcactggaaagtgtcagtgtcgtgatggattcggt
ggaaagacctgcacagactgccaagagaactactggggagaccccaggatccagtgcaga
gcctgtgactgtgacccccggggcatagagacatcccagtgtgaccagaagtcaggccac
tgtgtgtgtcagcagggggtgtcgggcgtgcgttgtgaccagtgtgcccggggcttctca
ggccagttccctaactgccagccctgccatctgtgctttggggactgggaccgggtggtg
caggacctggctgtccgaaccaagaccctgtcggagcgggctcaagagatccagaccacg
ggcctgactggagcctatgagaaggccttcagagacctggagaagaagctggcacaggcc
cagggcatcgtcaatacccgcaacaccaccgcagaggcagtcagcaccctgatggagctc
attgaagacctcaggtctcagataggtgagaccacagacacactgaatcgtctagaggga
gacctgaccagtgtgcagaacagcaatgttgaggccagtaatgagctcagtgctctggag
agagaggccaaacagctaaacctgacctcagatcagctccaccgtcaactagacatcctc
aagaactccaacttcctgggtgcatatgacagcatccgcagctcctataacaagtcccgt
gacgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgttagccaatca
gcagacacacgccgcaagacagaacgcctcatctctgccaagaaagatgacttcaaccgt
aagaacgctgccaacaagcgagccctgggggacctcaataccaaggctcaaaccctggac
atgaagaagatcaacgagaaggtctgtgggacccctggcgatgccccctgtgcagagagc
ctttgcggaggagcaggttgccgtgacgatgaggggaacaggcactgcggaggcctgaac
tgcaacggtgccgtagcgatggcagataacgctctggagaggtccaagcacacagagaaa
gagctgaacaaagccatgggggaggtagaggagctcttccacaaggttgcagatgccaag
accaaggcggaggaggcgaagagtaaagcccaggcagctctggacaaggccaccaacacc
aagaacaaggtggagcgctccaacaatgacctgcgggacctcatcaagcagatccgggac
ttcctcatgcaggagggtgctgatccagacagcattgagacagttgccaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccgaagcctctccaacgtagacgccattctgcaacagacacaggacgatgtgcgc
aaagcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagagggggtgaaa
tccacagcagagacggtaaaacaggcacttgaggatgctaagaaggcccaggccgcagca
gagaaggccatacagcgggctcgggctgacattggtgaaacggaggatcgactagcacag
atcgagtctgagacctccagcagtgaacatgacctaaatgatgccatgaaccgcatgggc
aacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagcgtggcagca
gctcgagctgaggagacagccactatggcacgggacaaagccaatgaggccaagcagatt
ttagatggcgagctgatggataagtatcacacagtgcaggagttagtggacacgaaagcc
aagaccgtcgaggaggcgaagaagaaagcagagcgcctaagagatgaggccaaagagcta
ctgaaggacgcccagaacaagctccagagactagcagagctagagaaagactatgaagag
aaccagaaaacgttggagggcaaagcccagcagttggacggcctagaagacaagatgaag
gctatcctcaacaacatcaacaaacagatccagatctacaacacctgtcagtaa
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integrated database retrieval system