Salmo salar (Atlantic salmon): 106572391
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Entry
106572391 CDS
T04363
Name
(RefSeq) coiled-coil domain-containing protein 50-like
KO
K25949
coiled-coil domain-containing protein 50
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106572391
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
Others
106572391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
106572391
NCBI-ProteinID:
XP_014001975
LinkDB
All DBs
Position
ssa15:81462191..81498491
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AA seq
850 aa
AA seq
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MTELEIDQSHLPRVQEVCHVFAVLEDGALAQNLQEQEIEQYYTTNIQKNQLVQNDIRIAK
RLQDEEEEQSAQHRALSQVSRQLEEQDLKYARMIQEEIQRCADEEAQRREQEDEEMAKHI
QEEEELRSRGQESHRDDGTSVRGSPSSSPRQPALSTSPSQGEGLHHQPATSRWQCSTSYT
QPQSDSTAEPLYETHRSAGQDNRKQSSHNGHSNLPRLIRNYLQCPPPDYLSDEGSEDADT
VFPEHLPPSRPCRLEKWLNTAPSGHQAPVYQPPERSYRSLGSPISSREERSRMWERGNGA
REERHRGSWQDRDRGVKEKRARIWDKNPRAKRDRGYDRDPRSEEGRGGRYISSTNDSARG
LQDRDRDGVRRRWTYRETSDNKQVRFQGDASRHCYSYHDDSRRAVNVWELIAHDLRERGV
AVRQSFHGGSRSREVRGEIRDGQVHDGENAVAHSDSQHQPRAFLRAVPTRRSHHGDVGER
TRASQREGYSNQGHGGDGERILENLTIVEGSGTEVNVEHSRDDGLFSRGRGGRRSSGDPR
NRVSSGGDQKREGGDDGHHHSERRVRSASDRQHGLKQEEQNSSKEEEEERREERPLRRVH
HLSQSFCSRGASIRARSRHSSRAGAALQPEEGVCLDLGELHQVLLDEELARRLQKEEEKL
LTRSPPARSSLSQHDSYPEGDFRVAQVAQDEEIARFMQKQEIQLKHQSRDLNGPGSQREQ
HDLADPHNRRTVRERPIQRERLDSEGLPSPTEDCSPDYQAPSPTSTLSQQPIRNIAEELD
PTFKTKRPGKESIRAGQTISGPSSCQSHPIPHSGLHDFMEEPTFIPPTKRQSAKSGRAKS
KEKKENCKQQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctggagattgatcagtcccacctgccacgggtccaggaagtgtgccatgtt
tttgctgtcctggaggatggagcattggcacaaaacctacaggaacaggaaattgagcag
tattacaccaccaacatccagaagaaccagctggtgcaaaatgacatccgcatcgccaag
aggctgcaggatgaggaggaggaacagagtgctcagcacagagccctgagccaggtgtct
agacaacttgaggaacaggatttgaagtatgcccggatgatccaggaggagatccagaga
tgtgctgatgaggaggctcagaggagggagcaggaggatgaggaaatggctaaacacatc
caggaagaggaggagctgaggagcagggggcaggaaagccaccgtgatgatggtaccagc
gtccgtggctcaccctcgtcatccccacgccagcctgctctcagcaccagccctagccag
ggagaagggctgcaccatcagcctgctaccagcaggtggcaatgttccacctcttacaca
cagccacagtcagactctactgctgagcctctgtatgagacccacaggtcagcaggacag
gataatagaaaacaatcatcacataatggacactctaatctgcctagactcatcaggaac
tacctccaatgcccaccacctgactatttgagtgatgaaggctcagaggatgcagacact
gttttccctgaacacctccctccatcccggccctgtagactggagaaatggctcaatact
gcccctagtggtcaccaggctcctgtgtaccaaccaccggagaggagttacaggagtctc
ggcagtcccatcagctccagagaagagcgcagcaggatgtgggagaggggaaatggagca
agggaggaaaggcatagggggagttggcaggacagggatagaggggttaaggagaagagg
gctaggatttgggacaagaatcccagggcaaagcgtgaccggggttatgacagggacccc
aggtcagaggaggggagaggggggcgctacatcagtagtactaatgactctgccagaggg
ctgcaggatagagaccgagacggggttaggaggaggtggacctacagagaaaccagcgac
aacaaacaagtccgcttccagggcgatgccagcaggcattgttatagttaccatgacgac
agcaggcgcgcagtgaatgtatgggagctgattgcccatgacttaagagagaggggtgtg
gccgtgaggcagagcttccacggggggtcaaggtcacgggaggtcagaggtgagatcaga
gacggccaagtgcatgatggggaaaatgccgttgcccacagtgactctcaacaccaaccg
agagcttttctaagagctgtccccaccaggcgtagtcaccatggagatgtcggggaaaga
acgagagcctcacaaagagaaggctacagtaaccaaggccatggaggagacggagagaga
atccttgaaaacctgaccatagtggagggtagtgggactgaggtcaatgttgaacacagt
agagatgatgggcttttcagcagagggagaggggggaggaggagtagtggcgaccctagg
aacagggtcagctcaggtggggaccagaagagggagggcggggatgatgggcaccaccat
agtgagcgcagggtgaggagtgcaagtgatcgccagcatgggcttaagcaggaggagcag
aacagctcaaaggaggaggaagaggagaggagggaggagagacccctgcggagagtccac
catctcagccaaagcttctgcagcagaggggcctccatcagggccagatctaggcactcc
tccagagcaggagccgcgctgcagccggaggagggggtgtgtctggacctgggggaactg
caccaggtgttgctggatgaggagctggccaggaggcttcagaaggaggaggagaagctg
ttgactaggagccctccagcccgttcttccctctctcaacatgactcctacccagaggga
gacttcagagttgcgcaagtggctcaggatgaggaaatcgcccgcttcatgcagaaacag
gaaatacagttgaagcaccagtcacgtgaccttaatggcccggggtcacaacgtgaacag
catgacctggctgaccctcacaacaggagaactgtcagagagagaccgattcagcgggag
agactggactctgagggccttccatctcctactgaggattgttctccagactatcaggcc
cctagccccacctcaacactatcacaacagccaatcagaaacattgcagaggaactggac
ccaactttcaagaccaagagaccaggcaaggagagcatcagagcaggacagaccatttct
gggccatcctcctgtcagtctcatccaatcccccactctggcttacatgacttcatggag
gagcctacgttcatcccgcccaccaagaggcaaagcgccaaatcaggacgcgccaaatcc
aaagagaagaaggagaactgtaagcagcagtga
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